Information report for 462941169
Gene Details
Functional Annotation
- Refseq: XP_025792345.1 — uncharacterized protein LOC112873563
- TrEMBL: A0A3L6SAH4 — A0A3L6SAH4_PANMI; Zinc finger protein GLI1-like isoform X2
- STRING: Pavir.J38242.1.p — (Panicum virgatum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.9KG589700.1.p, Pavir.9NG747700.1.p, Pavir.9KG588800.1.p
- Setaria italica: Seita.9G540000.1.p, SETIT_034911mg
- Setaria viridis: SEVIR_9G544300v2, Sevir.9G544300.1.p
- Zea mays: GRMZM2G329159_P01, GRMZM2G329159, AC149818.2_FGP008
Sequences
CDS Sequence:
- >462941169|Eragrostis_tef|C2H2|462941169
ATGCGCATCCGCCGCTACGCCGCGCGCCTCCTCTCCTCGTCTGCCACCATCACCAACCCGGCCTCGCCCCCGCCGCAACCCGCCGCGGCTTGGCTCCACGACGCCGCCACTCCCCCACGCAGGTCCGGGAATCCCACCTTCTACATCGCCTCGTTATTCTGCTGCGTCGCCGTTATGCAAGAGGCTCCGGACGCCGTCAAGCACAAAGGACACATTGCCTGTCTGGTGCCGGAATCGGAGGTCAAGAGCGGGGAGCTTGTCGGTCTTGCTCAAGGACTGCCTGCTCCTGAAGCTAAAAAATGCAAGGCAGATCATGAACCTCCTGTGAATGAAGCTGATGAGGGTCTGGTGGTTACAAATGGTGGTTCTGTTGTGACTGAAGCTGCCGCGAAACCGGAGGATGCTAATGGAGCCACTCTTGTTACTAAAGCTGATGTGAACCTTGCGTTCAAGGCTGGACCTTTTGTTACCAATGATGTTACTATTGACCAGGAAGTTAAATGTGGAGGTTCTCTTGTGACTGATACAATCAAGACAGATGTTACAGGGGGGGATTCTCTTGTGAATGGATCGACCACTGAATTAGAAGTTTTGAAGGTTGCGCCTGTTTCTAATGGAGTGGTTACTGATCCAGAAGTTACAGAGCGAGTTCCTCTTGAGAACAGAGCTGCCACTTTGCCAGGGGCAACAGGCATTGAGCCAGATGTCACAGGGGGGTGTTCTATTATGAATGAATCTGGTGCAGAACTGGGAGTCATAAGGACAGCTTCTTTGGTTTACGAAGCCTCTACTGAGCCGGAGCTGACGGATAAAGTTTCTCTTATGACCAAAGCTGCCGCTGACGCAGGAGTTACAATCACCGTGCCCGAAGTTACCAGGACAGGTTACCTCGGTAATGAAGGTGCTGCGGGGCTAGAAGTTGCGAGGGGAGCTTCTCCTGTACATGAAGCTGCTGAACTGGAAGCTACAGAGGAGGATTCTATTGCTAGCCAAGCTGATCGGGAAGCGGATGATAGTGGCAGGGTTTCCTGCAGCGTAGAAGATGATCCTGCTTTGGATGAGCCACAACCTCCTAATAGCGATATGACAGGCAAGGTGCAGGTTGGAAATGCTGGAGAGACTGTTGCCACCGCAATGGAGCCTTCTCAATGTGATGCGACAGATGTTGATGGTTCTGTGGGCTCCACAAGCGATGGTCCTGTGGGAGCCAAAGATTCAATTGTTGAGGGTGGAGTGGCACATGATAAATCTGTCACCCCCAGTGTTTCATGTACATTAGGTGTAGTGGCTAGAAGCATCGGTAGATCAGAGAGAACTGATGTCATATGTTATACTAGACGCAGAGGTAAAAGGAAGCTGGATCTGCTTGAGGTAAAGACAGAAAATATTGATTTGGAGGATAGAGTTATATCTGATCGATTTGAGGAAAACAAAACACTGAAGTCAAATGGCCCTTGTGAGAGCATGATATCAAGAGCAGGATCTGTAGATGTTAAACTTGCTGACATAAAGAGAGAACTTATGGAGAACTCACCTGCAAGAAAGGTTAAAAAGATGAAGAAAAACAAATTTGAATGTAATATTGACTATTGCCGCATGACATTCAAAACAAAAACTGAGCTTTCTGTCCACAATAAGAACATGTGCACGGTGAAGTCCTGCAGCAGACATTTCAGATCCCACAAGTACCTGAGGCGCCATCAGACTGTCCACAATGACGATATGCCTTACAAATGTCCATGGGAGGGCTGCAGTATCGCTTTCAAGTGGCCATGGGATCGGGCTGAGCATTTCCAGGTCCATGCTGGGGTGAAGCCTTATAAATGCATGACACCTGGGTGCAGCAAGATATATAAGTTTGTTTCAGACTTCACCCGGCACAGGCGGAGTCTCGGCAAGGCAAGGCAAGCTTTGCTGGAGGATCCAAACCCGCCCTACTTTTGTGAAAAGAATAGCTCTGCACTCAAAATGGGTGGCCATCACATGTTTGATGCAATAATCTGCGGCTAA
Protein Sequence:
- >462941169|Eragrostis_tef|C2H2|462941169
MRIRRYAARLLSSSATITNPASPPPQPAAAWLHDAATPPRRSGNPTFYIASLFCCVAVMQEAPDAVKHKGHIACLVPESEVKSGELVGLAQGLPAPEAKKCKADHEPPVNEADEGLVVTNGGSVVTEAAAKPEDANGATLVTKADVNLAFKAGPFVTNDVTIDQEVKCGGSLVTDTIKTDVTGGDSLVNGSTTELEVLKVAPVSNGVVTDPEVTERVPLENRAATLPGATGIEPDVTGGCSIMNESGAELGVIRTASLVYEASTEPELTDKVSLMTKAAADAGVTITVPEVTRTGYLGNEGAAGLEVARGASPVHEAAELEATEEDSIASQADREADDSGRVSCSVEDDPALDEPQPPNSDMTGKVQVGNAGETVATAMEPSQCDATDVDGSVGSTSDGPVGAKDSIVEGGVAHDKSVTPSVSCTLGVVARSIGRSERTDVICYTRRRGKRKLDLLEVKTENIDLEDRVISDRFEENKTLKSNGPCESMISRAGSVDVKLADIKRELMENSPARKVKKMKKNKFECNIDYCRMTFKTKTELSVHNKNMCTVKSCSRHFRSHKYLRRHQTVHNDDMPYKCPWEGCSIAFKWPWDRAEHFQVHAGVKPYKCMTPGCSKIYKFVSDFTRHRRSLGKARQALLEDPNPPYFCEKNSSALKMGGHHMFDAIICG