Information report for 462934437
Gene Details
Functional Annotation
- Refseq: XP_008658772.1 — uncharacterized protein LOC100381553 isoform X2
- Swissprot: Q10RP4 — SE14_ORYSJ; Lysine-specific demethylase SE14
- TrEMBL: I1P7M7 — I1P7M7_ORYGL; Uncharacterized protein
- STRING: ORGLA03G0037300.1 — (Oryza glaberrima)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g74997.1.p, BRADI_1g74997v3, Bradi1g74997.2.p
- Panicum virgatum: Pavir.9NG745400.1.p, Pavir.9KG592000.1.p, Pavir.9NG745400.3.p, Pavir.9NG745400.2.p
- Saccharum spontaneum: Sspon.01G0002960-2B, Sspon.01G0002960-3C
- Setaria italica: Seita.9G538300.1.p, SETIT_033886mg
- Setaria viridis: Sevir.9G542600.1.p, SEVIR_9G542600v2
Sequences
CDS Sequence:
- >462934437|Eragrostis_tef|C2H2|462934437
ATGTCAACCAATCTGTTGTTCCCGCGGCCAGATTCACGAGTTAGCGCCCTCCTCTCCCATTCGGCGGTTGTTGATTGGCGAGCAATCTGGATTTGCCTCCTTCCGGCGAGCTCTGGCGCTGGTCTGCAAGAAGCTTCGGTCTTCTTCCTCGATGCGAACTCCCAAGGGCTTAGTTGTTGTTTTGCAAAGCTAAAAGACCATGATGTCAAGTTGGAGGATAAGCAAAGCTTTGTCGTACTAATGGTAAACGATACGGAGTTAAACAGGGAAACCGGGTACGGTTACTTTCGAGATCTCAGCGAAGAGCGAAGAACGCGCAAGGGCACGCGGATCGCCACGGACACCGAGACGCGCGCCCACGTGCCGCCGACCGCGCCTCCGTGCCGGGTAACCGCCCACAAGCTCGAGTCCACACCGCTCGCATCGCCCTCCCACAGGATTCCTGCCTGCGCCCACACCACCCGCGAGGCCGCCGCCTACGGCATCTGCAAGGTCATCCCGCCCTACCAGCGCCCCTCCCGCCGCTTCGTCTTCGCCCACCTCAACCGCTCCCTCGCCTCCGCCTCCTCCGACGCCGCCAATCCAACCACATCCGCTTCCCCCAACCCCGCATCCTCGCGGCCGGAATCCGGCGCCGTGTTCACCACCCGGCACCAGGAGCTCGGCACCCCGCGGCGTGGGCGCCCGCCACCACAGGTGCTGAAGCAGGTGTGGCAGAGCGGTGAGCAGTACACGCTAGAGCGGTTCGAAGCCAAATCCCGGGCATTCTCTAAGAGCTATCTCGCGGGCCTTCGCGTTCCGACTCCACTCGAGGTGGAATCGCTCTTTTGGAAGGCGTCCGAAGACCGTCCTATCTATATTGAGTATGCGAATGATGTCCCTGGGTCTGGCTTTGCCGCCCCCGAGCAATCCCAGCGGCAGAGGAAACGGAGGCGAGAGGGTGAGTCAGATGACGGGGAGAAGGGCTCCGGATCGAGGCTGTCTGGAAGCCCATGGAACCTACAGGCAATTGCACGGGCTCCTGGATCACTCACACGATTCATGCCCGATGATGTTCCCGGGGTGACCTCTCCAATGGTGTACATTGGGATGCTGTTTAGTTGGTTTGCATGGCATGTCGAGGATCACGAGTTACACAGTCTCAATTTCCTCCATACCGGTTCACCCAAGACGTGGTATGCAGTTCCTGGGGACCGAGCTGCTGAGCTCGAGGACGTTATTCGTGTGCATGGCTATGGAGGGGACTCTGATCGCCTTGCATCTCTGGCAGTGCTCGGGGAGAAAACAACATTAATGTCCCCAGAAGTTCTTGTTGCCCACGGTGTGCCCTGTTGTAGATTGGTACAGTACCCTGGTGAGTTTGTGGTGACATTCCCAAGGGCCTACCATGTCGGGTTTAGCCATGGATTTAACTGTGGCGAAGCTGCCAACTTTGCAACCCCGCAATGGCTAAAGTTCGCCAAAGAGGCAGCGGTTCGAAGGGCCGTGATGAATTATCTTCCTATGCTCTCCCATCAACAGCTACTGTATTTGCTCGCAGTTTCTTTCATACCCAGAACTTCAAGCTTATTGTCTGGAAGTCGAACTTCTCGCTCAAGAGATCGAAGAAAAGAAGAAAGAGAATTGCTTGTCAAACAGGAGTTCTTACATGATATGATTAGTGAAAACAAGCTTTTGTGTTCGTTTCTGAAAAAGAAACCAATCAATAATGTAGTGCTATGGGAGCCTGACTTGCTGCCATCTCTACATTCCTGCTCTTCTGGCTCAAAAATTCTTGACAAGAAGTCTGAGGGTGGTTGCAGAATTGAATCTCAGCAATGCAGCCACAAAGGTCATAGTTCATCTGATGGCACTGCATGTATGACTGGGACACAATCTGAAAGTATGTCTACGGATAGCAAACCATCCTATGCTATAGCTGCTGCTGAGGAGGAACAGGTTGAGGGGGATGCAGATGATGAGGGCGACCTGCCTTTTGATTTGAGCATTGATTCTGGCTCATTGACATGTGTGGCTTGTGGAATTCTTGGGTTTCCATTCATGGCGATTCTTCAGCCTTCCAGAGAAGCCTTGGAAGATTACACCAAATTAAAAGCACTTGCAATATCACTTGCGGAGGAAATTGAGTTTCAGTTTGACTGTACAGATGTTCCACTGACAAATGCATCCAAATCTGATCTACAACTAATAAACATTTCAATTGATGACGAGGGACATGAAGAAGATGGAAGAGACTGGACATCGCAGATGGGTCTAAACTTAAAATATTGTGCCAAGCTTAGGAAAGAAAGGTCAGGGAACCAGGAAAGACCTCCTTTGTCCTTTTGGGGGCTGTTTTCCAACCAGCCAGCCACTTCAGATGTTCCAAGTCTCAAATGGCTCTGCAGAAAAGCACGGACTCCATACAAAGTTATTGGTATTATTTCCAGCTCTAGTGCCACAACTGCTGTGAAAGTTGAGCCTGAAGATACAAAGCCAAAAATAGGCAATTTTGAAATCGTTTATGAGGAAGAAAATAGCCAACAGGCTCTCCAACAGTGTAGCCGCCTGCAATCAAGTAAACTGCAAGATTCTGATGATATAGCGACTATGCAATTGTGTACTGACAAGGAAGATGTCAAAAAACAACCTCTTGTCGACATCCCTATCGCTCTCGCTGAATATCCTATTGTGCAGCAAGTTTCTGAGGGTCCAGTAAATGTTGACACGCGCAGTCAAGTTATCTGTTCATCAGATTCCCAGGATTCACTCCCACCTGCTGATTCAACTTTTGAAGTTGAGAGAGATCAAGAATGTGTACAATCAATCGTGCGAAGTAGTTCAACAGCTGTTTCTGTTCAACAGTTCGTTGATGATGAAAGTGTCTCCATGGAAGGAAGCATGAACTGTTTAAGCAGTCATGAGTACTCAGAATCTGGGAACAATACTTTAAGGGGCAGAGATGAACAGTTGCATGTTCAGCAAGATCAGGAGATGACAACACTTTCCAATAATCTCAACAGGAAAGCAGTTGGCCCATGCCTCATTGATTCAGAAGTAAAGTGTGGGGACGCTGCGTCATCAATCCTTGCAAATGAAGATGACTGTGCTAAGACATCTTGCTGTTTGGATGTTGTAACCGAAGACAATAAATCTCTTTCAGACAATCAACCTGAGGCACATGATCAGAGTGCGGATCGACAAGGCAGGTTGACCTTCGGCTGCCTTGGCTCCGCAGGTGTTCCTAGTTCAACTGAGCCACTAACTCCGCATGATTTGATGAGTGATGAGTTGCAGGTTGCTACCAGTCATTCCGTTGTCACGTCTGATGAGCTCAAGAACATTAGTCCCAATAATGAATCTTCGCAGAAAGAGGCCGTGCAGGCTGCTTTGGTGAGTATGATACCTACAGAAGATGGGCAATCTATCAGATCAAACACTTTTGATATTTTACTTGGAGCTTTAGCTGAAGAGTCCAAGGTAGCAGATGCCCCTGGGAAAGATGAGGTCGGCAAAGCTTCCTTGACATTAATGACACTGGCTAGCAATGACCAAACTTCAGATGAAGTTACAGAACGCAAGGTTGTAGAAATGACGAAAAGAGATACAATTTTGGGTATAACAGAAGATTGCCAACAAGTTGATCAGTCTCATGATTTCCAGTTGTCAGATGCGGTATCTAGAAGCATTGGGAGGTCAAGTAGAACAGATATAATATGTTATGTCAGACGCAAACACAAAAGAAAGAGAAAACCTGGAGCAAATACTGATACTTCACACAGTGTAGGGAGTTTTGTACGCTCCCCCTGTGAGAGCTTGAGGCCAAGGAGTAGACCTGCTATAGTTGAAGAGATGATAACTGCGGAGGCCTCTACTGCGAGAAAGGGTAAGAGAGCAAAAACGGAATCATTTGAATGTGAAGTTGATCTTTGTGGCATGAAATTTGACACTAGAGCTGAACTTAATGCCCACAAGCGCAATATTTGCACTGATGATTCATGTGGCAAGCGGTTCAGCTCACACAAATACTTGAAGCGGCATCAGGTGGTCCATAGTGAGGTGAGACCATTGAAGTGTCCCTGGGAAGGTTGTGGAATGACTTTCAAGTGGCTGTGGGCTCAGACTGAGCATGTCAGAGTGCACACAGGAGAGCGGCCATACAAGTGCTCTGCTCCTGACTGTGGGCAGACATTTAGATATGTCTCAGATTACAGTCGACATAGAAAGAAGTTTAATCATTATTGA
Protein Sequence:
- >462934437|Eragrostis_tef|C2H2|462934437
MSTNLLFPRPDSRVSALLSHSAVVDWRAIWICLLPASSGAGLQEASVFFLDANSQGLSCCFAKLKDHDVKLEDKQSFVVLMVNDTELNRETGYGYFRDLSEERRTRKGTRIATDTETRAHVPPTAPPCRVTAHKLESTPLASPSHRIPACAHTTREAAAYGICKVIPPYQRPSRRFVFAHLNRSLASASSDAANPTTSASPNPASSRPESGAVFTTRHQELGTPRRGRPPPQVLKQVWQSGEQYTLERFEAKSRAFSKSYLAGLRVPTPLEVESLFWKASEDRPIYIEYANDVPGSGFAAPEQSQRQRKRRREGESDDGEKGSGSRLSGSPWNLQAIARAPGSLTRFMPDDVPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSPKTWYAVPGDRAAELEDVIRVHGYGGDSDRLASLAVLGEKTTLMSPEVLVAHGVPCCRLVQYPGEFVVTFPRAYHVGFSHGFNCGEAANFATPQWLKFAKEAAVRRAVMNYLPMLSHQQLLYLLAVSFIPRTSSLLSGSRTSRSRDRRKEERELLVKQEFLHDMISENKLLCSFLKKKPINNVVLWEPDLLPSLHSCSSGSKILDKKSEGGCRIESQQCSHKGHSSSDGTACMTGTQSESMSTDSKPSYAIAAAEEEQVEGDADDEGDLPFDLSIDSGSLTCVACGILGFPFMAILQPSREALEDYTKLKALAISLAEEIEFQFDCTDVPLTNASKSDLQLINISIDDEGHEEDGRDWTSQMGLNLKYCAKLRKERSGNQERPPLSFWGLFSNQPATSDVPSLKWLCRKARTPYKVIGIISSSSATTAVKVEPEDTKPKIGNFEIVYEEENSQQALQQCSRLQSSKLQDSDDIATMQLCTDKEDVKKQPLVDIPIALAEYPIVQQVSEGPVNVDTRSQVICSSDSQDSLPPADSTFEVERDQECVQSIVRSSSTAVSVQQFVDDESVSMEGSMNCLSSHEYSESGNNTLRGRDEQLHVQQDQEMTTLSNNLNRKAVGPCLIDSEVKCGDAASSILANEDDCAKTSCCLDVVTEDNKSLSDNQPEAHDQSADRQGRLTFGCLGSAGVPSSTEPLTPHDLMSDELQVATSHSVVTSDELKNISPNNESSQKEAVQAALVSMIPTEDGQSIRSNTFDILLGALAEESKVADAPGKDEVGKASLTLMTLASNDQTSDEVTERKVVEMTKRDTILGITEDCQQVDQSHDFQLSDAVSRSIGRSSRTDIICYVRRKHKRKRKPGANTDTSHSVGSFVRSPCESLRPRSRPAIVEEMITAEASTARKGKRAKTESFECEVDLCGMKFDTRAELNAHKRNICTDDSCGKRFSSHKYLKRHQVVHSEVRPLKCPWEGCGMTFKWLWAQTEHVRVHTGERPYKCSAPDCGQTFRYVSDYSRHRKKFNHY