Information report for 462932115
Gene Details
Functional Annotation
- Refseq: XP_021301716.1 — lysine-specific demethylase JMJ705
- TrEMBL: A0A0A9BB41 — A0A0A9BB41_ARUDO; REF6
- STRING: GRMZM2G431157_P01 — (Zea mays)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi4g39130.2.p, Bradi4g39130.1.p, BRADI_4g39130v3
- Panicum virgatum: Pavir.3NG095200.1.p, Pavir.3KG240000.1.p
- Setaria viridis: Sevir.3G311800.2.p, Sevir.3G311800.1.p
- Triticum aestivum: Traes_5BS_23717182B.1
- Zea mays: GRMZM2G431157_P01, GRMZM2G431157
Sequences
CDS Sequence:
- >462932115|Eragrostis_tef|C2H2|462932115
ATGAAATCTGATGATATCACAAATCGGATAGCAGAAAGACATGAGATGGTTCCTCCACGAGGGCATGCTTCTGGAACAGATGATAATATGATAAATAGCATAAGTTTGGCCCAAGTGTCTGATAAATGTGGAGAGTTATACAGCAGTACCCATGAATGTCCTTCTGCTCTTGGGCTTCTGGCCTCTGCATATGACTCATCAGATTCAGATGAGGAAACAGCTGGCAATATATCAATTGATAGTGAAAAATATGATGCTGCAGATGGATCTACAAATATCCAGTCCTCAGGAGCATTAGTTCTGCAGAAGTCTAATGTACACTGTCAAGAGAAATGTGAAGAGAGAATTGCACCATCTCTCATGAACCCAGCAGAAAATACAAGTATGCTAATGACTCGGGCTAGTAGGGAAACAGATATCAGCCATTTTGCAGTGTTGGGACAGCCACCAACTTCCTATGAGCAGTGGTCTTCATATCTTGATTTGGATGATGCTATAACTACATCAAGTGTGAACGCCTCTTCAGATACTAGCTTGAGCACAGGTAAAGGCTCAATAGTACCAGATGCACTGGCCATGTACACCAAAGATTCTTGCAAAATGCATGTATTTTGTCTAGAACATGCTTTGGAGACATGGACCCAGCTTCAACCAATTGGTGGTGCTAATATCATGCTTTTGTGCCATCCAGAATACCCTAGAGCCGAGTCGGCAGCAAAAGTTATAGCAGAAGAGATTGGTATGAAGCATGCTTGGAAAGATGTCACTTTCAAAGAAGCAACAGTTGAAGAAATTGGAGTAATTCAATCGGCTCTGCAGGATGAAGATACTGAACCCACTAGCAGTGATTGGGCAGTAAAAATGGGAATCAACATCTATTACAGCGCTAAACAGAGCAAATCTCCACTTTACAGCAAGCAGATACCATACAATTCTATCATTTACAAGGCATTTGCCCAAGAAAATCCAGACAGTTGCACAGATGACGAAGGACAACGATCGGGCACAACAAAGAAAAAGGTGGCTGGATGGTGGTGTGGGAAAGTTTGGATGTCAAACCAAGTTCACCCACTTCTAGCTCGTGAGCATGAAGAACAGAATCATGACATGGTTTACAGCAAAGCAATATTCAGTGCTACTTCCCATGACAAGATAAAAGAACCATCTGCAAGATCTACTGCCCTTATCAGACGAAGCTTATCAAAAAGACTATCTGGACGAAAGCAAAAGAATTCTGTTGAAAAATCTCAAGCCAGGAAGAAGAGATGCACTGCCTCTGATGAACCTAATCTGCACCACAGTCGCATTGGGGTGATATCCGAAGCCAACCAGGACCAGGCTAGAAACTTTGATGATTATTACAAACCCGATGACGGCTATGAAAGTGAGGAAGCACCCAACACTCAGCAGTATCAGCACCATGAACTACAAAACATGAACGAAAGGTCAAGTTCTAAGAAGCGAAAGGGTGATAAAAGAGACCATTTTCATGAGCTACATGATGAAAATGGCGACATCGACTGCAAGCTTGACATAGATAGCATAATTAATACCACAATAGGCGACTGGAATAACAGTCCATCAGAGTTTGGTGTCGTGGAAGTGAAGTCCGGTGTTAAACTGCAAGGTAGTAAGGGAAAATCCAGCAAGTGCAAAACTGGTGAAGATTTGTCTAATGGAAACAAGAAATTGCGAAAGATGGAGAAAAAAACAAGTACTAAGAAACAAAAGAGTGACAAGACAAATAGGCAGTTTCGAGAGAATCACACTGAAGATTTAGATTTGGTACATGATGGAGATGAAGCCACACAGGACAGCTGGGATCAAATTCCACAACAGAAAACTGATGATGCAAAAGTAAAATCTAGAGGCAAAATTAAAAATGTTAAGGAAAAAGCCAGCAAATGTCAGTCAAGTGGAAATAAGGAAGGAAATTTTTCATGTAATACAGAGTCCAATAGAGGAGATGGAGCCATAACAGACAATTGGGATGAAATTCCAAAAGCAACAACCGATGATGTGAAAGTGAAATCTAGAGGCAAGATACAAAGTGGTAAGCAGAAAGCCATCAAACGTGAGGCAAGTGATGGCTTGCGCCATGGGAAGAAAGGAACTAAATATGCTTGTGATATAGAAGGGTGCGACATGAGCTTCCGCACCCAGAACGACCTGTTGCTGCACAAAAAAGACATTTGCCCTGTAAAAGGATGTGGGAAGAAGTTCTTCTGCCATAAATACTTGCTTCAGCACCGCAAAGTGCACCTGGATGAAAGGCCACTTATGTGTACATATGAAGGCTGCGATAAGACATTCAAGTGGCCATGGGCTAGGACAGAGCACATGAGAGTGCATACGGGGGTGCGACCGTACGCATGCACGGAACCTGGTTGCACTCAGACGTTCCGGTTTGTGTCAGACTTCAGCCGGCACAAGAGAAAGACTGGTCATTCCTCTGATAAAAAAAGGAAGAAC
Protein Sequence:
- >462932115|Eragrostis_tef|C2H2|462932115
MKSDDITNRIAERHEMVPPRGHASGTDDNMINSISLAQVSDKCGELYSSTHECPSALGLLASAYDSSDSDEETAGNISIDSEKYDAADGSTNIQSSGALVLQKSNVHCQEKCEERIAPSLMNPAENTSMLMTRASRETDISHFAVLGQPPTSYEQWSSYLDLDDAITTSSVNASSDTSLSTGKGSIVPDALAMYTKDSCKMHVFCLEHALETWTQLQPIGGANIMLLCHPEYPRAESAAKVIAEEIGMKHAWKDVTFKEATVEEIGVIQSALQDEDTEPTSSDWAVKMGINIYYSAKQSKSPLYSKQIPYNSIIYKAFAQENPDSCTDDEGQRSGTTKKKVAGWWCGKVWMSNQVHPLLAREHEEQNHDMVYSKAIFSATSHDKIKEPSARSTALIRRSLSKRLSGRKQKNSVEKSQARKKRCTASDEPNLHHSRIGVISEANQDQARNFDDYYKPDDGYESEEAPNTQQYQHHELQNMNERSSSKKRKGDKRDHFHELHDENGDIDCKLDIDSIINTTIGDWNNSPSEFGVVEVKSGVKLQGSKGKSSKCKTGEDLSNGNKKLRKMEKKTSTKKQKSDKTNRQFRENHTEDLDLVHDGDEATQDSWDQIPQQKTDDAKVKSRGKIKNVKEKASKCQSSGNKEGNFSCNTESNRGDGAITDNWDEIPKATTDDVKVKSRGKIQSGKQKAIKREASDGLRHGKKGTKYACDIEGCDMSFRTQNDLLLHKKDICPVKGCGKKFFCHKYLLQHRKVHLDERPLMCTYEGCDKTFKWPWARTEHMRVHTGVRPYACTEPGCTQTFRFVSDFSRHKRKTGHSSDKKRKN