Information report for 462913740
Gene Details
Functional Annotation
- Refseq: XP_022680015.1 — uncharacterized protein LOC101770765
- TrEMBL: M7Z8M4 — M7Z8M4_TRIUA; WW domain-containing oxidoreductase
- STRING: TRIUR3_22095-P1 — (Triticum urartu)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Capsicum annuum: T459_09388
- Panicum virgatum: Pavir.2NG238700.2.p, Pavir.2NG238700.1.p, Pavir.2NG240000.1.p
- Setaria italica: Seita.2G135900.2.p, Seita.2G135900.1.p
- Setaria viridis: Sevir.2G141200.2.p, Sevir.2G141200.1.p
- Zea mays: AC234522.1_FGP009, GRMZM2G142502_P03, GRMZM2G142502_P02
Sequences
CDS Sequence:
- >462913740|Eragrostis_tef|C2H2|462913740
ATGCCGGGACCATATTGCCCTCGGCAAAAACTGGCGTACCTCTTCTCATTTCTTTCGTTTCTTCTCTGTTCTTTGATCTCCCCCGCCGCCGTCCACACGCCCGCTGTCCCAGGCCGGCCGGCCGCCAGCCTCCACTGCTGCTCCAGTTCGGCAGTCCGCCAGCGCCTCCGCCGCTCCAAGTTCGTCCGCCCTCCCTCTCTGATCCAAGCGGCCGCCCGAACGCTATCTTGCTCCAAGGCCCTCACTACCGCTGCTGCAAGGCCCGCACGCCTGCTCCAAGGTCGCCCGGCTGCACTGCTTCACACTTCGGAGGTCTGCACCCACATCGCCAGCGAAGCCGCTATTGGAGTAGGGAGTGGAGTGGAGATCCATACCCGCAGAAGGAGGCCCTCGACCGACTTGCAGTTGGAGATGAACGCATCGAAGAGATACAACCATATTACTGACAAGGACGATGCAGAAACAGATATCATGACCACGTCCGGCCAAATCCAACCCCTCAAAATCCCGGATGCCGTTGTTGCACTTGCTCAAGCTGCTGCAAAGGCAAACGGCGAGACTGAAAAATATCTTCCAGGATGGCCATTGTTCTCGCCTCCTAAGCTGCAGTTGGACAAGTGCACCAAGTGTTCACGTGAATTCTGCTCTTCAATCAACTTTAGACGGCATACACGTGTTCATCGCCGGACACTCAAATTAGACAAGGATTTCCCCAAGAATAGAGACCATATCGCTGCTTTCTGGGATAAACTGACAGTGGATGAGGCTAAAACAATTTTGTCCTTCCTAGATGTTGCTATAGAGGGAGAGGCAGACAAGGTTGCAACAGAACTGAAAAATGTTGTTGCATGTGCTAGTTACATCCTTGAAAAAAAGCTGGTTGAGGCGTGGTCTGCTGATAAGGCTGCTGAAGCATTAAGATGCCAGAAGTTACTAGTTGAGGAAGAGGAAGCTGCTCAGAAAAGGCAAGCTGAACTGATGGAACGGAAACGGATGAAGAAACTTAGGCAGAAAGAACAGAGATCAAAAGACCTCAAGGATGAGGAAGTCTCAGTTCATTTATCTGAAATCGTGATTGTTGCGTCAGGTTCTCCTAGAATTCAAAGTCTTAAGGATGTTTCAGATCCTGGCCTTTATGAGCAAGACTCACATCATCCTCAATTTGAAGCACAAGATGATAATGGTTTTAATGTGGACCGATCAGTAGAGGGTATCAGTTATGATTCAGGGCATGAGATGGGTGCGGGTGTTATTACAACGCAACAAGTCATTTCGAGACATCACATTGGAGGAACCGAAAACCATGCGCAAAACAGCTTTTCTTCTGGCACTGCGTTGGCTCCAAAACATGCAGCTAGACATTCAAGTTACAGGAATACAAATGTCTGTACATTGTCAAATAGAAACAAAACTTGGGAGCGGAAAGTGCGAGCTGATATTGAAGAGCAATGCCCAAAACATGAGTTAGATACAGATGATGGACTAGGAAAAAGCTCTCGTGTACTAATTGGATCTATAAGTGTTGCAATTGAAGATGGTAGTGAGCATTCGCAGGAGTTTAGAGATCCCAAGCATGACTCCGCTTCTCCTAGTTCAAAGATTACCAACAATTCAGTAACCGAGATGACGGAACTTCTTAGGCACGAGGAGAGCAGAAATAACGACAATATTACACCTGCAGTGGAGAAACATCTTTCCTCCAGTGTTATGACATATGACAACAGCTCTTCGACTCTCTGGAATACAGATTTGGCAGGGTGTGGACGTTTACAATGTACAACATTTTCCAGTGAAGAAGCAACAGCCTTTCTTTCTCGAAACTGTCCAGAAGAAACCACCCCGCGGCTGCCTTCTTCGGTTCTTCCTCCGGAGAGAAGAATACACAGGAACTTGGACTCGCCATTCGTCGGTGGCAAGATGTTAACCTCGTTGCTGCTTGGCCGGAAGGGCCCCTCCGGCTTTTCTTGGAGCTCCACCGCCGACGAGGTCACCACCGGCGTCTCCGCCGCCGGACTCACCGCCATCGTCACCGGGGCGTCCAGCGGCATCGGCGCCGAGACGGCGCGGACGCTGGCGCTGCGCGGGGCGCACGTCGTCATGGCCGTCAGGAGCCTCCCCGCCGCCCAGGAACTGCGGGACGCCGTCCTCGCCCAGGCGCCGGAGGCCAAGCTCGACGTCATGGAGCTCGACCTCTCCTCCATGGCCTCCGTCCGCACCTTCGCCTCCGAATACATCTCCAGGGGACTCCCCCTTAACATCCTCATGTGCGTATTCCTCCTCTGCTCTTCTTGGCTGATCCCTTCGAGATCCCCGCCTGCCTGCAGCCTGGGATGGCATTTTCTGCTGACGCACCTCCTCTTGGATACCATGAAGAAGACTTCTCGTGAATCAAATGTGGAAGGAAGAATTGTGAATGTTTCATCTGAGGGACACAGATTTGCATATAAGGAAGGCATCCGCTTTGAAAAGATAAATGACGAGTCAGTGTATAGCAGCATTGGAGCATATGGGCAGTCAAAGCTTGCAAATATCTTGCATGCTAATGAACTTTCTAGAAGATTCAAGGAAGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGCTCTATCATCACAAACCTTCTTCGCCACCATAGTATCCTAGATGTTATCCATAGGACATTTGGTAAACTGGTTCTCAAAAATGCTCAACAGGGTGCGGCTACCACATGCTATGTTGCGCTGCACCCGCAGGTGAAGGGTGTCTCCGGGAAGTACTTCTGTGATAGCAACGTGTATGAGCCGAGCGAGAAGGCCAAGGACATGGGCCTTGCCAAGAGGCTATGGGATTTCAGCATCGAGCTCATCACCTGA
Protein Sequence:
- >462913740|Eragrostis_tef|C2H2|462913740
MPGPYCPRQKLAYLFSFLSFLLCSLISPAAVHTPAVPGRPAASLHCCSSSAVRQRLRRSKFVRPPSLIQAAARTLSCSKALTTAAARPARLLQGRPAALLHTSEVCTHIASEAAIGVGSGVEIHTRRRRPSTDLQLEMNASKRYNHITDKDDAETDIMTTSGQIQPLKIPDAVVALAQAAAKANGETEKYLPGWPLFSPPKLQLDKCTKCSREFCSSINFRRHTRVHRRTLKLDKDFPKNRDHIAAFWDKLTVDEAKTILSFLDVAIEGEADKVATELKNVVACASYILEKKLVEAWSADKAAEALRCQKLLVEEEEAAQKRQAELMERKRMKKLRQKEQRSKDLKDEEVSVHLSEIVIVASGSPRIQSLKDVSDPGLYEQDSHHPQFEAQDDNGFNVDRSVEGISYDSGHEMGAGVITTQQVISRHHIGGTENHAQNSFSSGTALAPKHAARHSSYRNTNVCTLSNRNKTWERKVRADIEEQCPKHELDTDDGLGKSSRVLIGSISVAIEDGSEHSQEFRDPKHDSASPSSKITNNSVTEMTELLRHEESRNNDNITPAVEKHLSSSVMTYDNSSSTLWNTDLAGCGRLQCTTFSSEEATAFLSRNCPEETTPRLPSSVLPPERRIHRNLDSPFVGGKMLTSLLLGRKGPSGFSWSSTADEVTTGVSAAGLTAIVTGASSGIGAETARTLALRGAHVVMAVRSLPAAQELRDAVLAQAPEAKLDVMELDLSSMASVRTFASEYISRGLPLNILMCVFLLCSSWLIPSRSPPACSLGWHFLLTHLLLDTMKKTSRESNVEGRIVNVSSEGHRFAYKEGIRFEKINDESVYSSIGAYGQSKLANILHANELSRRFKEEGVNITANSLHPGSIITNLLRHHSILDVIHRTFGKLVLKNAQQGAATTCYVALHPQVKGVSGKYFCDSNVYEPSEKAKDMGLAKRLWDFSIELIT