Information report for 462886352
Gene Details
Functional Annotation
- Refseq: XP_004957094.1 — uncharacterized protein LOC101759536
- TrEMBL: A0A1E5WKC4 — A0A1E5WKC4_9POAL; Uncharacterized protein
- STRING: Pavir.Ba01787.1.p — (Panicum virgatum)
- STRING: Pavir.Bb02507.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g38747.1.p, Bradi3g38747.3.p
- Triticum aestivum: Traes_5BL_C3F3A871A.1, Traes_5AL_903412779.2, Traes_5DL_3FBCC4C48.1
Sequences
CDS Sequence:
- >462886352|Eragrostis_tef|C2H2|462886352
ATGGGGACGGAGGTGGCTGCCGTGGTGGACCTCCGGGCGCTGTCGCAGTCGGATCTCGCGGCGCTTGCGTCTGCGTCGCCTTACGCCGTGGACCCCCGCCTCGGCCGCCGGCGCGACGCCGACTTCCTGCCACCCCCCAAAATCGACCGCTCCGTCTTCAACGAGAGCGCTGGCTCCCGGAAGCAGACCTTCTCACGCCACCGTGCCGCCACCAACATCTCCCACAACCTGACCCCTGCCGCTGCCTCCTCATCCGCCACCGCATCTGCCCACACGGAGGAAGACTCCGAGAACCGTCTCATCGTCTTCCACCTCCAAAGCCTCTTCGCCCGCGACGACCCCTCGTACCCACCTCCGCCCCCGATCCAACCCCGACCCCAAACCCTAACCACGCCCGCGATAGCGGCACCCGCGCCCCCGGCGCCGTCACTGCCGCAGGCGGCAGACCCGGACAGGGAAGTGATAAATCCGAAGGGGGCAGCGGTTGATCTGGCGAGGCTCGCGGAGCTCAAGCGGACGGCAGGATTGGGGTCGGAGCCCGAGCTGCTGGGGTTCATGAACTCTCTGGAAGGGCAATGGGGAAGCCGGAGACGTCGGAGGAAGTTCGTGGACGCGAGCATGTTTGGTGACCACCTGCCCCGCGGGTGGAAGCTGCTGCTTGGGCTCAAGCGCAAGGAGCGTGTTGCATGGATTAATTGCCGCCGTTATGTGAGCCCCAAAGGACATCAGTTCGCTACTTGCAAAGAAGTGTCTTCCTATCTCATCTCTGTTCTTGGATATCCAGAGGCAAATCAAACTGCTACTCATAGCAACAGTGCATCAGTGCATGGCTTAAATTCTGTGAATCAAGCAAATCCAGCTGAGGAAAAACAAATTACAATACCAGTTAGTTCTGTTGCACTATTGAGTCACTCAGGTGACTCTCATCAGCAAAAGCTTCAGAAGGATGAAAGTCGGATGGGAGTGAGCGCAAAGGAGTGCCGGAAATGCAACTTGACCTTTGATGACCAGGGCGCTTATATGCAACATCAGTTGTCCTTTCATCAAAGGAAGGCTAAAAGGCGCAGGGTTAGTAAATCAGATGAACTGGGTGCTAGCGTAGATGGAAAGGTTCAAACTCGGGAATGTGAGAAGACCTCTGAAGAGGGACCTGGCAATTTCGACCACTCTGTTCCTGATGTAAGAGATCAAGGTCAGAGCACAACAAACCTGTTTGATGGGGCTTTTTCAGGTGAGTTGGGTGGTAAACCATCGATGATTGCAGCACAATGTGTGCTTCAGCAGATGCCTGCATTGCCTCAACAGGAAAAGGAACCTTCTGCTCCGGAGATGACTGACCTTCCTGTTCTGGAAAAAGGAACCCTCAACAGGAAAAGGAATCATAATGGCGCTCTTATGGAGATGACTGACCTTCCTGTTCTGGAAAAAGGACCTGCTGCTGGAGAATCTGTCTCTGGGCACCATAAGGAGCCTCCCAAGATGATGACTAGCTTTCCTGAACAGCAAAACAAACCTGTGGCTGGAGATCGTGTTTTTGAGCATCACCAGGACCCGGTTATCAATTCTAGTGACTGTAAAATCAATAATGGAGCGTCTCACAATGCTGGAGCATCTCTTGCTGTTGATGAAGAAAGCAAGTTTAGTACTTGCAATATCGCAACTATTCATGAGAGTTACAACCCAAAATATTTACAACATCCCAGCAAAGAATGTTCCCAGATGTTCAACAGAACTGATGAAACTTGTAGCATACCTAAAGGGGTTTCTCCAACTTCGTATGGTCCTGATGAAAGCAAATGCACTGACAATTCAGTGGGATATAATGATACAACACAACCCAAACAAGTTGGCAGTTCTCCTAAAGAAAATAATTTTGATAACCTGATGGAAAATAAACCTCTTTCGATAAGCCTGGATGAGCGTGATCTTAATTCAGTTGATATGGAGGTACATGATGCTAGCGTAGTTTGCAAAGTGGTGAATCCCCCAAGCATTGAAAACCCTGCTGTGGACAAAAGTGGTATCAGAATAAGGGATGTAAACCTCAATTCATGTTTGGATACAATATCTTCTCCTGTTTCTGGTGGAAACTATGATACATCAAACACCACTGATGACGCCACTAGGTCGTCCATTATTGCCCAATGCTTTGGTACGAACTCTAATGATGACAATGCTTGTAAGGATGGAAACTTAGCCAACCAGAACAAATCTTCTAAGGGTGAGAATTTTGTAAACCAGAAAAATGACATGGTATATCAATCTAATTTGACCATGGGCCACATCCCTCCAGCTCAAATTAATGTGGATTTTTTCACTTCTGAACTCAAGAACTATGGCAACAGAAGTGAAGATAATGCCAAAGAAGCACTGATCAACTCACGGAACATGACGGGTAATGAAACAGGTTTTGATGTTGAAGCTTACAACAATGATATCTTCAATGGTACTATCACAGAAAGTAGTCTTGCCCAGCTCAATAATGCCATTAATATGAAAAATGATTTTGCAAGCTGCTACTCATTATCTGATCTAAACACACTGACTGGTGGTACTGCAACTGATGAAATTGATATCCATGGTATGAGGAATTCGTATGTTGGCTCCACCAGTCGTGATGAACCAAATGGACATTGCACACTAGATATTGATATCAAGGGTTCTATGCTCGAAGCACTAGAAAAATCTGACAGTGACTTGGAAAATCAATACAGCGGTGCGGGTCCTAGCTGTGATTCACTCCCTACAGCTGGCCCAAGTGGGAATATGGATGATTTTATGTCCATGCAAACTAATTTTGGTAGTTTTACCTCTTTGGTCCGTGCTGTTGAAGATGTTCCGCTGAGTAGGATTATTCAGGATCAGTGCGATTTGCAACTTGGATTCGGAGGCCCAAAGCAGCCAATGTATCCAAGCTTTGAGCAGCAGCTAAGGATGGCCTCAGCTGGAGCTCCACCCTACGGGGGCATGGGCAGGCATGATTCTGTGCCTGTACCTGAGCCGACGCTGATGTTGGGTTATGCACCACAGCTCGGGAGCTGCCCGCCATTTCAGTTAGGCTGGGGGGCATCATTATCGAAGATGGGTGCCGGTCGAGTTGCACTGGTTGTAGTACCTTACGTTGGTGCATGA
Protein Sequence:
- >462886352|Eragrostis_tef|C2H2|462886352
MGTEVAAVVDLRALSQSDLAALASASPYAVDPRLGRRRDADFLPPPKIDRSVFNESAGSRKQTFSRHRAATNISHNLTPAAASSSATASAHTEEDSENRLIVFHLQSLFARDDPSYPPPPPIQPRPQTLTTPAIAAPAPPAPSLPQAADPDREVINPKGAAVDLARLAELKRTAGLGSEPELLGFMNSLEGQWGSRRRRRKFVDASMFGDHLPRGWKLLLGLKRKERVAWINCRRYVSPKGHQFATCKEVSSYLISVLGYPEANQTATHSNSASVHGLNSVNQANPAEEKQITIPVSSVALLSHSGDSHQQKLQKDESRMGVSAKECRKCNLTFDDQGAYMQHQLSFHQRKAKRRRVSKSDELGASVDGKVQTRECEKTSEEGPGNFDHSVPDVRDQGQSTTNLFDGAFSGELGGKPSMIAAQCVLQQMPALPQQEKEPSAPEMTDLPVLEKGTLNRKRNHNGALMEMTDLPVLEKGPAAGESVSGHHKEPPKMMTSFPEQQNKPVAGDRVFEHHQDPVINSSDCKINNGASHNAGASLAVDEESKFSTCNIATIHESYNPKYLQHPSKECSQMFNRTDETCSIPKGVSPTSYGPDESKCTDNSVGYNDTTQPKQVGSSPKENNFDNLMENKPLSISLDERDLNSVDMEVHDASVVCKVVNPPSIENPAVDKSGIRIRDVNLNSCLDTISSPVSGGNYDTSNTTDDATRSSIIAQCFGTNSNDDNACKDGNLANQNKSSKGENFVNQKNDMVYQSNLTMGHIPPAQINVDFFTSELKNYGNRSEDNAKEALINSRNMTGNETGFDVEAYNNDIFNGTITESSLAQLNNAINMKNDFASCYSLSDLNTLTGGTATDEIDIHGMRNSYVGSTSRDEPNGHCTLDIDIKGSMLEALEKSDSDLENQYSGAGPSCDSLPTAGPSGNMDDFMSMQTNFGSFTSLVRAVEDVPLSRIIQDQCDLQLGFGGPKQPMYPSFEQQLRMASAGAPPYGGMGRHDSVPVPEPTLMLGYAPQLGSCPPFQLGWGASLSKMGAGRVALVVVPYVGA