Information report for 462866573
Gene Details
Functional Annotation
- Refseq: XP_025818794.1 — protein indeterminate-domain 2-like
- TrEMBL: A0A1E5VSU0 — A0A1E5VSU0_9POAL; Protein indeterminate-domain 2
- STRING: Pavir.Aa01904.1.p — (Panicum virgatum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g44520.1.p
- Panicum virgatum: Pavir.1NG274600.1.p
- Setaria italica: Seita.1G175100.1.p
- Setaria viridis: Sevir.1G178000.1.p
- Triticum aestivum: Traes_4BL_38E55D7B4.1, Traes_4AS_F7A905B43.1
- Zea mays: GRMZM2G320287_P01
Sequences
CDS Sequence:
- >462866573|Eragrostis_tef|C2H2|462866573
ATGTCACACACGTCGGAGGAAGAATCCCTGAACAATTTCCAGCAACAAGCGAAGCTCGAAGCTTGTGCAACTGGGTCAAGCAAAGCTGATACTGTCATGCCTGTAGTGAAAAAGAGACGAGGTCATCCAGGAAATCTAGATCCTGATGTAGAAGTAGTGGCTTTGTCACCTAAGACACTCCTGGCAACAAACAGATACATATGTGAGGTCTGCCATAAGGGTTTCCAAAGAGACCAGAACCTCCAGCTCCACAGGAGAGGCCATAACCTACCATGGAAGCTGAAGCAGAGAAGCAGCACTGAAGCTAAGAAGAAGGTGTATGTCTGCCCTGAGGCCACTTGCCCTCACCATGAAGCAAGCCGAGCTTTGGGCGATCTCACAGGCATAAAAAAGCACTACTCCAGGAAGCATGGGGAGAAAAAGTGGAAGTGTGACAGGTGCTCAAAGAAGTATGCTGTGCAGTCAGATTGGAAAGCTCACACAAAGATATGTGGCACCAAGGAGTATCGATGTGACTGTGGAACAATCTTCTCAAGAAAGGACAGCTTCATCACTCATCGAGCCTTCTGTGATGCATTGGCTGAAGACAACTCCAGGGTTAACCACACTCTTGCTACAATGGTGGGAAGTCTGCATGGTCAGCAGCAGGACATCTTTTCGCATGGAGTACCTAGCTTCACCGCTTCACCAACCGATGTGATCTCAAACTTATCTACCAATGACCATAACTCAGACAGCCATCTGAGAACTTTATCCCCTTATGCTCTCATTACAAGAAACACAGCATTGTTTTCGAACCAGATATCACAAAAGGACTCGGGGTTTCCACTTGATGGAAGCGCATCAAGCTTTACTTACATGTCCATGAACTCTCCATACATGTCTGCAACTGCACTGCTACAGAAAGCTGCGGAGATGGGAGCAAAGACCAGCCATGATCCTATATCACCATTGCTTCTGAAAAGTTTCCCAAGTAATGTGACCACTCCGAGAGATCATATGGACATATCCAGTGGAAGCCAAGGAGATTCTCTAGGGAATTCAGCAGCTAATAGTGTTGGCATCAAGACAGCTGATGATGATGGCTCTTACATGAGTGGCCGTGGTAACATTCTGATAAACTCCCCATGGGCAAGCAGCTGCATGAGACCTACTACGATCATTGGAAGTATCAAATACCTCTCATACACAAGTTCTGGAAATTTAACTTCCATTATAAAGGACAGCTTCATCACTCATCGAGCCTTTTGTGATGCATTGGCTGAAGACAACTCTAGGGTTAACCACACTCTTGCTACAATGGTGGGAAGTCTGCATGGTCAGCAGCAGGACATCTTTTCGCATGGAGTACCTAGCTTCACCGCTTCACCAACCGATGTGATCTCAAACTTATCTACCAATGACCATAACTCAGACAGCCATCTGAGAACTTTATCCCCTTATGCTCTCATTACAAGAAACACAGCATTGTTTTCGAACCAGATATCACAAAAGGACTCGGGGTTTCCACTTGATGGAAGCGCATCAAGCTTTACTTACATGTCCATGAACTCTCCATACATGTCTGCAACTGCACTGCTACAGAAAGCTGCGGAGATGGGAGCAAAGACCAGCCATGATCCTATATCACCATTGCTTCTGAAAAGTTTCCCAAGTAATGTGACCACTCCGAGAGATCATATGGACATATCCAGTGGAAGCCAAGGAGATTCTCTAGGGAATTCAGCAGCTAATAGTGTTGGCATCAAGACAGCTGATGATGATGGCTCTTACATGAGTGGCCGTGGTAACATTCTGATAAACTCCCCATGGGCAAGCAGCTGCATGAGACCTACTACGGTACCTTTAATTGGATTAATGAACAATCCATTCGTCATGAGAGCAGAAAAAGAGAGCCCCAGCATTTTTTCTGAAAGTCAGACGCAGCACAACAGACAGGGAAACATTTCAGGGGTAGGAGATGCTGGACTGACTCAAGACTTTCTAGGTTTAGGAGGCAACGGGAATTTGGATATTAGTTCTGAGACCTACAATGCGGATGTGACAGCATTAAGCTATTCTGATGAACAACAAAAGTCTCAGGAGCACATCTACTCTTACCATCAGTCATCTCTAGACTCCGCTGCATTGGAGAAACCCATTTGGGAATCCTAA
Protein Sequence:
- >462866573|Eragrostis_tef|C2H2|462866573
MSHTSEEESLNNFQQQAKLEACATGSSKADTVMPVVKKRRGHPGNLDPDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVYVCPEATCPHHEASRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKICGTKEYRCDCGTIFSRKDSFITHRAFCDALAEDNSRVNHTLATMVGSLHGQQQDIFSHGVPSFTASPTDVISNLSTNDHNSDSHLRTLSPYALITRNTALFSNQISQKDSGFPLDGSASSFTYMSMNSPYMSATALLQKAAEMGAKTSHDPISPLLLKSFPSNVTTPRDHMDISSGSQGDSLGNSAANSVGIKTADDDGSYMSGRGNILINSPWASSCMRPTTIIGSIKYLSYTSSGNLTSIIKDSFITHRAFCDALAEDNSRVNHTLATMVGSLHGQQQDIFSHGVPSFTASPTDVISNLSTNDHNSDSHLRTLSPYALITRNTALFSNQISQKDSGFPLDGSASSFTYMSMNSPYMSATALLQKAAEMGAKTSHDPISPLLLKSFPSNVTTPRDHMDISSGSQGDSLGNSAANSVGIKTADDDGSYMSGRGNILINSPWASSCMRPTTVPLIGLMNNPFVMRAEKESPSIFSESQTQHNRQGNISGVGDAGLTQDFLGLGGNGNLDISSETYNADVTALSYSDEQQKSQEHIYSYHQSSLDSAALEKPIWES