Information report for 462860770
Gene Details
Functional Annotation
- Refseq: XP_025795590.1 — pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like
- TrEMBL: A0A2T7F0Z0 — A0A2T7F0Z0_9POAL; Uncharacterized protein
- STRING: Sb08g001305.1 — (Sorghum bicolor)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0005515 — Molecular Function — protein binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.1NG010700.1.p, Pavir.1KG020700.1.p
- Setaria italica: Seita.1G117800.1.p
- Setaria viridis: Sevir.1G116900.1.p
- Triticum aestivum: Traes_6DS_2B2F9C290.2, Traes_6AS_448C7608C.2, Traes_6BS_D373D1A96.2
Sequences
CDS Sequence:
- >462860770|Eragrostis_tef|C2H2|462860770
ATGAATAGGAGCGTCTGCCACCACCTTCTGGCCCAGTGCAAAACGCTAAGAGAGCTCCAGAAAATCCATGCCCAGGCCCTTGCCCATGGCCTCCACCCAGGCCACCAGTCCGTTTCCTGTAAACTCTTCCGGCGCTATGCTGATTTTGGCCGCCCTTCCGATGCGCACAAGTTGTTTGATGAGATCCCCAGCCCTGACCTTGTCTCCTTTACCAGCCTCATGTCCCTCCACATTCAGTTAGATCGCTACCGTGAGGCTGTATCCTTGTTCTCTCATATTGTTGCATCTGGCCACCGTCCCGATGGTTTTGCTGTTGTTGGTGCCCTCTCGGCCTCTGGCGCGGTGGGCGACCTGGGTGTTGGGAAGGCAGTTCATGGCCTCATTTTCCGGCACGGATTGAACTCTGAGGTTGTTGTGGGCAATGCTTTGATCGATTTGTATAGTCGATGCGCGAAGTTTAACTCCGCGCAAATGGTGTTCGATAGAATGATTGTTAAAGATGAGGTCACTTGGGGTAGCATGCTGCATGGTCATATCAAGTGTGCTGGTGTGGATTCAGCGTTGACCTTCTTTGATCATATGCCCGTCAAGAGTGTAGTTTCTTGGACAGCACTAATCACTGGTCTTGTCCAAGGCAAGCAACCTGTACAGGCTCTAGAGCTTTTTGGCAGGATGGTACTGGCGGGCCATCGTCCTACCCATGTTACAATTGTAGGTGTACTGTCAGCTTGCGCCGACATTGGTGCTCTGGATTTAGGGCGTGTTATTCATGGGTATGGAAGTAAATATAATATCAACAAGAATATAATTGTGAGCAATGCTCTGATGGATATGTATGCGAAGAGTGGAAGCATAGAGATGGCGTTTTCTGTGTTTGAAGAAGTCCAGTTGAAGGATGCATTCACATGGACAACTATGATATCAAGTTTCACCGTCCAGGGAAACGGAATGAAAGCTCTTGAGCTGTTTTCGGACATGCTTAGGTCTGGGGTGGTTCCAAACAGCGTAACTTATGTTTCGGTTCTGTCAGCATGCAGCCATGCTGGGTTAATCGAAGAAGGTAGACAGTTGTTTGGTACCATGCGTGAAATTTACAATATTGACCCCCAACTTGAGCACTATGGATGCATAATTGATCTGTTAGCACGTGGAGGGCTACTAGAGGAAGCTGAAGCTCTGATAGCTGATATGAATATGGAACCTGATATTGTTATATGGAGGTCACTTTTGAGTGCATGTCTAGTTCATGGTAATGATAGATTGGCTGAGATTGCTGGAAAGGAAATTATTAAGAGAGAACCAGGAGATGATGGGGTTCATGTGCTTCTTTGGAATATGTATGCCTCATCAAATAGATGGACAGAAGCTCGAGAGATGAGGCATCAAATGTTGACTAGGAAGATCTTTAAACAGCCAGGGTGTAGTTGGATTGAAGTTGATGGTGTTGTCCACGAATTCCTGGTCGAGGACAAGACTCACATAGCTCGAAGGGAAATTTACAAAACCTTGGAATGTATGGCTAAGGAATTCAAGATAGATCTGAGTTCATCCTCGTGGGAACAAATTGACTGTGTTGGGGTGGTTCCAAACAGCGTAACTTATGTTTCGGTTCTGTCAGCATGCAGCCATGCTGGGTTAATCAAAGAAGGTAGACAGTTGTTTGGTACAATGCGTGAAATTTACAATATTGACCCCCAACTTGAGCACTATGGATGCATAATTGATCTGTTAGCACGTGGAGGGCTACTAGAGGAAGCTGAAGCTCTGATAGCTGATATGAATATGGAACCTGATATTGTTATATGGAGGTCACTTTTGAGTGCATGTCTAGTTCATGGTAATGATAGATTGGCTGAGATTGCTGGAAAGGAAATTATTAAGAGAGAACCAGGAGATGATGGGGTTCATGTGCTTCTTTGGAATATGTATGCCTCATCAAATAGATGGACAGAAGCTCGAGAGATGAGGCATCAAATGTTGACTAGGAAGATCTTTAAACAGCCAGGGTGTAGTTGGATTGAAGTTGATGGTGTTGTCCACGAATTCCTGGTCGAGGACAAGACTCACATAGCTCGAAGGGAAATTTACAAAACCTTGGAATGTGGTTTTGAGAAGATGCACAAGGATCCAATATCAAAATGTCATCTCAGAAAGCTAGGACCATTCTTCATTGGTCCTCAGCTCGCTATGGGCAAGTTGTTTAGCTGCACTGTGGACGGTTGTGATAGGAGGTTCGGTATCAAAGCAAATATGCAACGGCACATTAAGGAAATCCATGAGGATGAAAATACTGCTAAGAGCGACCAGCAATTCGTTTGCAAGGAGGGATGTAACAAGTCCTTCAAGTATCTTTCGAGGCTAAAGAAACATGAGGAGTCGCATGTTAAACTGAACTATGTGGAAGTAGTATGCTGTGTACCAGGGTGCATGAAGATGTTCACAAATGTTGAATGCTTAAGGGCTCATAACCAATCTTGCCATCAGTACATTCAGTGTGAGATATGTGGGGAAAAGCACCTGAAGAAGAACATTAAGCGGCACCTACAAGCACATGAAGAGGTCCCATCTAGTGAAAGGATGAAATGCACCTTTGAGGGCTGTGAACACACCTTTTCCAACAAATCAAATCTGACAAAACATATGAAGGCATGCCATGACAACGTGAAGCCTTTCTCTTGCCGATTTGCTGGGTGTGACAAAGCCTTCACCTACAAGCACGTCAGGGACAACCATGAGCAATCTAGCGCTCATGGAGACTTCGAGGAGATTGACGCACAATTGCAGTCACGTCCCAGAGGTGGAAGAAAGAGGAAATCCTTGACGGTTGAAACACTAACACGCAAGAGAGTGACCATTCCCGGCCAGGCTTCAGCGACGGATGATGGTGTGGAGTATCTACGTTGGTTGCTGTCCGGTGGGGATGGTTCAAGCCAAAATCTGTAG
Protein Sequence:
- >462860770|Eragrostis_tef|C2H2|462860770
MNRSVCHHLLAQCKTLRELQKIHAQALAHGLHPGHQSVSCKLFRRYADFGRPSDAHKLFDEIPSPDLVSFTSLMSLHIQLDRYREAVSLFSHIVASGHRPDGFAVVGALSASGAVGDLGVGKAVHGLIFRHGLNSEVVVGNALIDLYSRCAKFNSAQMVFDRMIVKDEVTWGSMLHGHIKCAGVDSALTFFDHMPVKSVVSWTALITGLVQGKQPVQALELFGRMVLAGHRPTHVTIVGVLSACADIGALDLGRVIHGYGSKYNINKNIIVSNALMDMYAKSGSIEMAFSVFEEVQLKDAFTWTTMISSFTVQGNGMKALELFSDMLRSGVVPNSVTYVSVLSACSHAGLIEEGRQLFGTMREIYNIDPQLEHYGCIIDLLARGGLLEEAEALIADMNMEPDIVIWRSLLSACLVHGNDRLAEIAGKEIIKREPGDDGVHVLLWNMYASSNRWTEAREMRHQMLTRKIFKQPGCSWIEVDGVVHEFLVEDKTHIARREIYKTLECMAKEFKIDLSSSSWEQIDCVGVVPNSVTYVSVLSACSHAGLIKEGRQLFGTMREIYNIDPQLEHYGCIIDLLARGGLLEEAEALIADMNMEPDIVIWRSLLSACLVHGNDRLAEIAGKEIIKREPGDDGVHVLLWNMYASSNRWTEAREMRHQMLTRKIFKQPGCSWIEVDGVVHEFLVEDKTHIARREIYKTLECGFEKMHKDPISKCHLRKLGPFFIGPQLAMGKLFSCTVDGCDRRFGIKANMQRHIKEIHEDENTAKSDQQFVCKEGCNKSFKYLSRLKKHEESHVKLNYVEVVCCVPGCMKMFTNVECLRAHNQSCHQYIQCEICGEKHLKKNIKRHLQAHEEVPSSERMKCTFEGCEHTFSNKSNLTKHMKACHDNVKPFSCRFAGCDKAFTYKHVRDNHEQSSAHGDFEEIDAQLQSRPRGGRKRKSLTVETLTRKRVTIPGQASATDDGVEYLRWLLSGGDGSSQNL