Information report for 440762
Gene Details
Functional Annotation
- Refseq: XP_002969518.1 — lysine-specific demethylase JMJ705
- TrEMBL: D8RE62 — D8RE62_SELML; Uncharacterized protein
- STRING: EFJ29606 — (Selaginella moellendorffii)
- GO:0009741 — Biological Process — response to brassinosteroid
- GO:0009826 — Biological Process — unidimensional cell growth
- GO:0033169 — Biological Process — histone H3-K9 demethylation
- GO:0040010 — Biological Process — positive regulation of growth rate
- GO:0045815 — Biological Process — positive regulation of gene expression, epigenetic
- GO:0048577 — Biological Process — negative regulation of short-day photoperiodism, flowering
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
- GO:0071558 — Molecular Function — histone demethylase activity (H3-K27 specific)
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00136387001
- Cajanus cajan: C.cajan_24710
- Capsicum annuum: T459_08258, CA03g25230
- Cicer arietinum: XP_004515844.1
- Cucumis melo: MELO3C019813, MELO3C019813P1
- Saccharum spontaneum: Sspon.01G0002960-3C
- Solanum lycopersicum: Solyc03g111590.2.1, Solyc03g111590.3
- Vitis vinifera: GSVIVT01016246001
Sequences
CDS Sequence:
- >440762|Selaginella_moellendorffii|C2H2|440762
ATGGTAGGCGTAGATGTAGCACCTTGGCTGGCGTCGCTGCCCCTGGCGCCCGAGTTCCACCCCAGCGAGGAGGAGTTTGTGGATCCCATTGCCTACATTCTCAAGATTGAGCAGGAGGCCAGTCACTATGGTATCTGCAAAATCGTTCCCCCATACAGCCGGGCCCCCGAGAACACGGTGCTGTCCAACCTCAATGCGTCTCTCGCGGCCACCCAAGACGCTACCACTGCCGCCGCCACGGCTCCGGGATCTTGCTCCATCCACGCCGCCACTCCTCTGGCGCGTAGCATGTGTAGCGCCGTCGGGGGAGAAGGAGACGCTCGGGTTGTCATGCCGCAGAGTGTGGATTCGACGGCGAAATTCACGACGAGGAGGCAGCAGCTGGGATGGAACCCGAGGAGACCGCGCGGGGGATCGCAGTACAGAGCGCAAAAGCAGGTCTGGGAGAGTGGCGAATACTACACACTGGAACAGTTTGAGGACAAGGCCAAGGCCTTCTCCTCTACCACTCTCGGCCCTGGCTGCGACGACTTGAGCCCGCTGGCAGTGGAAACACTCTTTTGGAATGCCGAGTTCTCCAAGCCTATATCCATCGAGTACGCAAACGATATTCCAGGCTCTGCGTTTCTAGACTCGGGTGCTGGAGCTTTCCAAGGAGAAGATGGCCGAGAGCTGGCCGGCAGTGGGTGGAACATCCGCAACATTGCCCGCTCCCACGGCTCGTTACTCAAGTGCATGCCGGATGAAGTCCCTGGCGTCACCACTCCAATGGTGTACCTTGGTATGCTCTTCAGCTGGTTTGCTTGGCACGTCGAGGACCACGAGCTCCACAGTCTCAACTATCTGCACACGGGTGCTCGGAAAACGTGGTATGCGGTGCCATCGGATGCAGCCTGTGCTCTGGAGGAAGTCATTCGTTTGTATGGCTATGGCAGCCGCTTGAAGCCCCGAGCCGCGTTCACTCTTTTGGGAGAGAAGACGACTGTACTCTCGCCCGAAGTCTTGGTTGCCGCGGGAGTACCATGTTGCAGGCTCGTGCAAAATCCGGGAGAGTACGTCATTACGTTTCCAAGAGCTTACCATCTGGGCTTCAGTCATGGTTTCAACTGTGGAGAGGCTGCGAACTTTGCTACACCTGCGTGGCTGGAGGTTGCGCGCGAAGCAGCAGCAAGACGAGCATCTATGAGTCATCTCCCAATGCTCTCACACGAACAACTTCTCTACTTATTTACAATGTCGCTTGCGAAGAGTCCAAGCAGCCCGCAGCTTCAACTATCGACATTTAAGGTTGAAAGCGCGGTAAAGACGGCTTTTGTGAACGAAGTTAAGCAGAACAACACGGTCATTGCCAAGCTGCTGGAATTTGGAGTGGAAGGATGCGTCTTTTTGAGAGAATGCAAAACACCTGGCACTCGTCCACAGGCAACGGCAGCTGAAACAATGATCGCGTCTCAGGCTTGCGAAACTGAAACGCAACAGACAAGTCATTCTGACACTGGCTCGCTCCACGCAGAGAAAAACAACGACAAGCCTTTCTCCGTGGAAAGTAAATCTTTCTCGCCAGATAGATACGGAAATGCGAACGAAGCATCTCGGATAGCTCCTTTGCCTACTCCGTGGGGTGCACTACCTTGTGCAGCCTGTGGAATCTTATGCTTTGCAAGCATGGCTTTGGTGCAACCGACGGCAACTCCAACTTTTTCTTATCGCCAGCGCAAGCAGCCGCAAAAGTGCCGTACGAGTCAGGCAGGAGTTTTGCCACCTTCCAGCCTCGTGGACGTTTCCGACATTCCGAAGGTAGACACGGGGTCAATTCAGAAAAAACTGTCTCATTTTTCAGGAATATGCCAACTAAACAGTGCGCACGAAGAACCCGATGCCGGGGACTGCGACATGCTACCCGAACTGAGCTCCCTCTCCGATGACAACATCCCAGATAGTGAAGCGCTCCAGAAACTCCTGAAAGTTAGAACCCGTTTGACTCGGCCTTCTCTCGAGCTATTAGCAGAGATGTACAAGGATGATCTGAAGGAAGACATCGAGCAGTGTGGACCCGATGTTCCTCCTGATGCGGTCATAAGTACGGATGAGGTGGGAACATCTGTCGACGCACCGTGGCTGGTCCTTCGAGATGAGCCATGTGTCGCAGACTCGGACCAGGAACTTCAAAACCAGGCAGTGGTGGAAGCTGGAGCAGGCCGGTCGCTGTCGGCAATATTTGTTTCGAAAGGCTTGTGGTTCGGAGAAGAGCCAACGAAGGATCTTGATATATTGGATAACGCGTCGGCCACTGCTACGAACGTGACAGAATGTGATAGTCACAGAGAAACGGAAATTCCTGTTGTTCAAGCTCCAGTCTGTAGCTTCAACTGTGAATCCAACAACATTTTCTCCACCAACGAACTAGACGAAGATTGTTCCGCGGTCGAGGTCGACGCTGCAAATCCGATCCTTTCTTGCTCAAACAACGAGGCAGATGTGGATAAGACAATTGGAGCATGGAAGTTCTATAGGGGCTCTGCCCGACCTTATGTCTTATGCCTTGAGCATGCGGTGGAGGCTGTGACGAAGCTACAACCCCTTGGTGGAGCAACTGTTCTTGTTATCTGCCATCCAAATTATGGTTCCATTCAAAGAAAAGCAGAAGAGCTGGGTCAAGGAATGCACGCCATTTTCAACTGGCAGCAGATACCTTTGCGCGAGGCATCTGAAGCAGAAGTCGAGATAGTAAACAAGGCAATCCATTTGAAGATAGACAACAGCCTTGGCTGGAACTGGTGTGCGAAGATGGGGATTGGAAGCAGAAGAAATAGGAAAGGTACTGCTGGTATAGTGAGCTCGGAAGTGAGATTAGAACAGGAGGATCGAAAAACAGAAGCTGAGGCTGAATCGGAAATACCTTTAACAACGAAACCCGAAGCGGAAAAGAAAATGATTTGGTGCGGAAGGCAGTGGAAAGCAAGTCAGGTGCATCCACTGTTAGGGGGTGGAAAAAGTGCTGCACATTTACTGAGCCAAGTCTTACGAATCCAGAAACGTTTGCAGCCGGCTATGAAGATTAGAAATAGTTTTCCTGGACTATCTAGTCAACCATTGAAGAAGTTGAGGAAAGACGGTTGGGAGCAGCAGGAAAGAGTAATGACAGCAGCTATTTTGCGGAAGTCAAAACGAAATGCTGTCGCCCGGGAAGGAAGAAAGAAAAGACTAAAGTTTGATGGTTTACAAGCCCGGCTACAACAAGCTCAGCATGGCGTTTGCAAGCAGGCTGTGTTTTCGCTAGAATGCAACTCTAGTGAAAACCAGCAAAATGACCAAGATTCGACGAAGAATCACGGAGGAACGAACGTACAAGGGTGGCTACTTACTACTTGTGAGACCTCGTTTAATCCGGCTAGTTCCTCGACAGGGTGCCAAAGAAACTCAGATTTTGACTCGGCCGAGCTGGTTAAGTGGCACGATGTTCCAGTATCGTGTTCTCCGTCGTTAGGCCCTCCCATGCAAGCCTATGAATGGTCGAGTGACATATCTCCGAATGGCATATGCAGCACATCTCAACAGGACACCGGTTTTGACGAGATGCAAGAGTGGGATCAGAGGCCAGCCGATCGAGCTAGAAAGCTGGTTGCTCGTTTGAAGAGGAGGAGTGGCGACAGTCAAATGCTGGTGTTGTCGAAGAAAGCCAGGATAGAGTGCGTAGAAAACTCAGACGAGCTTAACAGTCTCATGGAGGACATTCCGGACAGCGTCTCGGGGCTAATTGCCACTGACGCGTATGCCGACGAGTCTGAAGAGGACGGCAAGGACGATGAGGTTGTGGTGGACGAGAGTGCTAGTGACATTGACGAGTACTTTCTGAGGAGCGGAAGTGCTTCCGACACCTCTCCTCCCAAGGCGCTGCCGTGCTTTGCTGCAAGCAGGAAGCGGTCTTCCAGCAAGTCGCGGGTGAAGCGTGCAACGTGGGAGAATCTGCTTAACAGGCTCGCTGCGCCAGCCGAAGAAGTGGCGCTGATCCAGAACCAGGACTCGTTCCCTCTCTCGTGTGTCACGGAAACGGGCTGGGAAGGAATCGAGTGTGGTACTTACCGGAGCAAGAAATCTGAAACGCCGCAGGGTGGTAAGAAAAGGGGAGGTGGCGGGAAGAGAGCAAAGGCAGCAGGAGCAGCGGCGGCGACGACGACAGCAGCAGCAGGAAATGGTGGTGGTGGGAACGTGGGTGTGGTGGCGGCGGACGAGATGGACGACGCAAACAACCCGTTCCCGTGCGACGTAGAGGGGTGCACGATGAGCTTCAACTCGGAGCAAGAGCTGGCGCAGCACAAGAAGAACAAGTGCACGTTCAAGGGGTGCGGCAAGCGCTTCTTCTCGCACAAGTACTTGGTGCAGCACCGGCGGGTTCATATGGACGAGAGGCCGCTCAAGTGCCCGTGGCAGGGATGCACAATGTCCTTCAAGTGGGCGTGGGCGAGGACGGAGCACATACGAGTCCATACCGGCGAGAGGCCGTATTCGTGCCCCGAGTGTGACAAGACGTTTAGATTCGTGTCCGACTTTAGCAGGCACAAGCGCAACACGGGTCACGCCAGAGCGTGA
Protein Sequence:
- >440762|Selaginella_moellendorffii|C2H2|440762
MVGVDVAPWLASLPLAPEFHPSEEEFVDPIAYILKIEQEASHYGICKIVPPYSRAPENTVLSNLNASLAATQDATTAAATAPGSCSIHAATPLARSMCSAVGGEGDARVVMPQSVDSTAKFTTRRQQLGWNPRRPRGGSQYRAQKQVWESGEYYTLEQFEDKAKAFSSTTLGPGCDDLSPLAVETLFWNAEFSKPISIEYANDIPGSAFLDSGAGAFQGEDGRELAGSGWNIRNIARSHGSLLKCMPDEVPGVTTPMVYLGMLFSWFAWHVEDHELHSLNYLHTGARKTWYAVPSDAACALEEVIRLYGYGSRLKPRAAFTLLGEKTTVLSPEVLVAAGVPCCRLVQNPGEYVITFPRAYHLGFSHGFNCGEAANFATPAWLEVAREAAARRASMSHLPMLSHEQLLYLFTMSLAKSPSSPQLQLSTFKVESAVKTAFVNEVKQNNTVIAKLLEFGVEGCVFLRECKTPGTRPQATAAETMIASQACETETQQTSHSDTGSLHAEKNNDKPFSVESKSFSPDRYGNANEASRIAPLPTPWGALPCAACGILCFASMALVQPTATPTFSYRQRKQPQKCRTSQAGVLPPSSLVDVSDIPKVDTGSIQKKLSHFSGICQLNSAHEEPDAGDCDMLPELSSLSDDNIPDSEALQKLLKVRTRLTRPSLELLAEMYKDDLKEDIEQCGPDVPPDAVISTDEVGTSVDAPWLVLRDEPCVADSDQELQNQAVVEAGAGRSLSAIFVSKGLWFGEEPTKDLDILDNASATATNVTECDSHRETEIPVVQAPVCSFNCESNNIFSTNELDEDCSAVEVDAANPILSCSNNEADVDKTIGAWKFYRGSARPYVLCLEHAVEAVTKLQPLGGATVLVICHPNYGSIQRKAEELGQGMHAIFNWQQIPLREASEAEVEIVNKAIHLKIDNSLGWNWCAKMGIGSRRNRKGTAGIVSSEVRLEQEDRKTEAEAESEIPLTTKPEAEKKMIWCGRQWKASQVHPLLGGGKSAAHLLSQVLRIQKRLQPAMKIRNSFPGLSSQPLKKLRKDGWEQQERVMTAAILRKSKRNAVAREGRKKRLKFDGLQARLQQAQHGVCKQAVFSLECNSSENQQNDQDSTKNHGGTNVQGWLLTTCETSFNPASSSTGCQRNSDFDSAELVKWHDVPVSCSPSLGPPMQAYEWSSDISPNGICSTSQQDTGFDEMQEWDQRPADRARKLVARLKRRSGDSQMLVLSKKARIECVENSDELNSLMEDIPDSVSGLIATDAYADESEEDGKDDEVVVDESASDIDEYFLRSGSASDTSPPKALPCFAASRKRSSSKSRVKRATWENLLNRLAAPAEEVALIQNQDSFPLSCVTETGWEGIECGTYRSKKSETPQGGKKRGGGGKRAKAAGAAAATTTAAAGNGGGGNVGVVAADEMDDANNPFPCDVEGCTMSFNSEQELAQHKKNKCTFKGCGKRFFSHKYLVQHRRVHMDERPLKCPWQGCTMSFKWAWARTEHIRVHTGERPYSCPECDKTFRFVSDFSRHKRNTGHARA*