Information report for 357440
Gene Details
Functional Annotation
- Refseq: XP_002865887.2 — uncharacterized protein LOC9301961
- TrEMBL: D7MRL3 — D7MRL3_ARALL; Uncharacterized protein
- STRING: fgenesh1_pg.C_scaffold_8001227 — (Arabidopsis lyrata)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT5G52010.1
- Brassica napus: GSBRNA2T00052630001, GSBRNA2T00066736001
- Brassica oleracea: XP_013622824.1
- Brassica rapa: XP_009132570.1
- Fragaria vesca: mrna09139.1-v1.0-hybrid
- Malus domestica: MDP0000937920
- Populus trichocarpa: Potri.014G025100.1
- Raphanus raphanistrum: RrC8119_p1
Sequences
CDS Sequence:
- >357440|Arabidopsis_lyrata|C2H2|357440
ATGGTAAGAAACAAAGAAGGTATCTTTGCACCAAAGGAGAAGAAAGTTGTAGTCTTGTGGGACTTAGACAACAAACCACCACGAGGTCCACCGTACGAAGCAGCAACAGCTCTCCGTAAAGTCGCGGAGAACCTCGGCCGAGTTGTCGAAATCTCCGCTTACGCAAATCGTCATGCTTTTATCCATTTACCTCATTGGGTCGTCGAAGAGAGACGAGAAAGGAGGAATCTTGATTTCATGGAGAGGAAAGGAGAAGTGACTCCAATTGATCCGTACATTTGTGGTGTCTGTGGTCGGAAGTGTAAAACCAATCTTGATTTGAAGAAACATTTCAAGCAGCTTCATGAGAGGGAGAGACAGAAGAAAGTGAATAGGATGAGATCTTTGAAAGGTAAGAAACGTCAGAAGTTTAAAGAACGTTATGTTTCAAGGAATGACAAGTATAATGAGGCGGCGAGGAGGTTGTTGACTCCTAAAGTTGGATATGGCTTAGAGGCGGAGCTTCGGCGAGCGGGGGTTTATGTGAAGACAGTGGAGGATAAGCCTCAGGCGGCGGATTGGGCGGTGAAGAGACAGATACAGCATTCGATGACGAGGGGGATTGATTGGTTGGTTTTGGTATCGGATGATAAGGATTTTTCGGATATGTTGAGGAAAGCTAGGGAGGCTGATCTTGGAACTTTGGTGGTTAGTGATAGGGATAGAGCGTTGGGACGGCATGCTGATTTGTGGGTGCCTTGGAGTGGAGTTGAGAAGGGAGAGATTGGGGAGATGGATTTGATTCCGGGGAAGAGACCGCGGTTTGAGGAGGATGAGGAGAGTGAGGTGGGATTTAGCGGTGGAGATGAGTTGTTTTCGTTGTCTTATGATGAGGATGAGAGGGCGGAGATGACGGTGGAGAGTGATGGGCTTGGGAGGTTTAATGTATCGGCGTTTTCAGAAGATGAATGGGTAGAGGATGAAGGAGACTTTGCGTTGAGTGATAGTGATGATGATAGTGACGATGAGCTCTTCTGA ATGGGGTGGACACTAGGGCAACGACAGGAGGCAACGGAAGGGGAAAGCGTCCCTTCAAATCCCTCGAGACGAAGGCTAAGAAAAGGTCTCTGGTCACCCGATGAAGATAACAAACTCACCAACTATATCATCAGAAACGGCCTCATGGGCTGCTGGAACTATGTCGCCAAGCAGGCTGGTCTGCAGAGATGTGGAAAGAGCTGTAGGCTGAGATGGATTAACTACTTACGCCCTGGCCTTAAACGTGGTCCCATTTCACGCCAAGAAGAGCGACTCATAATACACTTACAGTCCAGTCTCGGTAACAGCAGGTGGTCTCAAATTGCGGCACATTTGCCGGGACGCACAGACAATGAGATCAAGAATTACTGGAACTCTTCCATCAAGAAGAAGATCATGTTGAAACACGACCGCCCCTCCGCCGCCGCCGCTAACGGGGACANNNNNNNNAACAGAAAATCTAATTTCCCTTTCCAATCCAAGCGTATCTGCAATGCCGATTCAGTACCTGCTCATGTTCAGGAAGTTGCTACGTCGTCTCACTCTTCCCAGCCTTACTTGCAAGTCATGCCAGTAGAAGGATACCAGCCACATAACAGCGCCTTCAATATTCTACTTGCTACTGGAGAAAATCAGCTGTGTGTTCCGGGTCTGTTGGAATTCAAACAAGAAGCACGGGATCAAAATGATGAGTTTTTAATTGATCGAGACCTAATTAATCCAGATTTTATATCTCCGAGTCTGCAAACGCAAGGCCTGTATAATTATAAGGCTGCAAGATCATCGACATGCGATGAATTAATAGCAGAGTCATGCAGAACTACAGTAGCGCCTCATGAAGTGCCTGGCTCTGCCAATAATTACTTTCTGGGCTCAGCCGGAATCAGCATCCCTGCTCTGGTTGAAAGACAGACATCAAAAGAAAAAATTGAAAACGAGATGCTGATCGACTATTCGTCGTTCGCAGCATCTAGCGGAATAAGTGCAGGGAGCGCTGGTCACTCCTATTCAAATATTGCAGCTGATTTTACAGATGTCTATTCAGGAGTTTCTTATACGAATGAGCTGTTGGGAGTTAGAATACTGGAAGATCTGGTAAGTGTACATCATGAAAAGACTGCTCATCAGTCATGGCCGCCACTGAATTTCGTGGCCCAAGTTAGCGCGCCATCAATTAGAGGGGCCAACAATCTGGATGCTGAGGATGACTGGAAGGATCGTCCAAATTTGAGATATGATGTAAACCTGGGTGTCCCCACGTATATTGATATTAATAGCAGCTTGCAGACGACCTATCAGATCGAGGGAGGAGGAGGGTTTGGCGATCAACTGGATTTTTCGAGAATTCTCAATGAAAAAGAGAATACAAATCCAATTCCTGCAATATTTGGAGGAGGAAATGGAGCGTTGGAGATTCATGAGTACTACGAGGGTGAAGCCGAACAAGTTACAGTGTGGGCGCAAGACAATATGTGCAATATCAATACTGCTGCTGCTTCTTCTGATCCGTATCAAGTCTATTTGACCTAA
Protein Sequence:
- >357440|Arabidopsis_lyrata|C2H2|357440
MVRNKEGIFAPKEKKVVVLWDLDNKPPRGPPYEAATALRKVAENLGRVVEISAYANRHAFIHLPHWVVEERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKRQKFKERYVSRNDKYNEAARRLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQHSMTRGIDWLVLVSDDKDFSDMLRKAREADLGTLVVSDRDRALGRHADLWVPWSGVEKGEIGEMDLIPGKRPRFEEDEESEVGFSGGDELFSLSYDEDERAEMTVESDGLGRFNVSAFSEDEWVEDEGDFALSDSDDDSDDELF*