Information report for 333455
Gene Details
Functional Annotation
- Refseq: XP_020868113.1 — uncharacterized protein LOC9325405 isoform X1
- TrEMBL: D7KP50 — D7KP50_ARALL; Uncharacterized protein
- STRING: fgenesh1_pg.C_scaffold_1000020 — (Arabidopsis lyrata)
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0009507 — Cellular Component — chloroplast
- GO:0016491 — Molecular Function — oxidoreductase activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn205741
- Arabidopsis thaliana: AT1G02030.1
- Brassica napus: GSBRNA2T00017422001, GSBRNA2T00155517001, GSBRNA2T00072552001
- Brassica oleracea: XP_013590771.1
- Cajanus cajan: C.cajan_46011, C.cajan_36481
- Daucus carota: DCAR_006833
- Glycine max: Glyma.01G134200.1.p
- Gossypium hirsutum: Gh_A12G0859
- Populus trichocarpa: Potri.014G066100.2, Potri.002G143800.1
Sequences
CDS Sequence:
- >333455|Arabidopsis_lyrata|C2H2|333455
ATGGAAGAGAGGCATAAGTGCAAGTTATGTTGGAAGAGCTTCGCTAATGGAAGGGCTTTGGGAGGTCACATGAGGTCTCACATGCTCCCGAGTCAGCCCGAGTCAGCTTCATCTTCCATGGCCGATCCACTCCAGGACAGAGAGAGTGAAACCGAATCGTCCAAGAAGCCCACCCGCAAACGATCCAGACTTAACCGGAGATCCAACGAAGAAGGGAAAAGTGAAACCGCAGGAGCAGCAGAGGTGAAGATCGGGGTTCAAGAACTCAGTGAGTCGTGTACCGAGCAGGAACCGATGAGCTCGGTGTGTGACGCTGCAACAGAGGAAGAAGACGTGGCCTTGAGTCTCATGTTGCTGTCGAGAGACAAGTGGGAGAAGGAGGAGAGAGGGAAGAATAATAAGTGGTTCGAGTGCGAGACTTGCGAGAAAGTGTTTAAGTCGTATCAGGCGTTAGGTGAACACAGAGCAAGCCACAGGAAGAGGAGAGCAGAAACAGATCAATTAGTCTCAGATGAGTTGAAGAAGAAGAAGAAAAAGACTAGTCACCATGAATGTCCAATCTGTTCCAAGGTCTTCTCATCTGGTCAAGCTCTCGGAGGTCACAAAAGATCTCACGCTTCGGCCAGCAATGATGAATCCACGATCAGAAGATCAGGAATAATAATCAGCTTGATAGATCTAAATCTTCCAGCGCCATCGGAGGAGGAAGACATGGCCTCGTCACGCTTGATCAGATTATTGAGTCGTAGAGATGTGGTCAAAGAACACAAAAAGAGTAAAGGAGAAGGAAGAATGACGATTTCGTGGAGGTTAGCGTCTTCGACCTCTCTTCTCTCCATCCATCGCACACCAACAAGTGCCTTTATCTCCGCCATGACCTTCTCTTCTTCTTCTTCTTCTTCTTCGCTTGAATTGGTTCTCGAGTACCACAACCAGACGAAGCACTCCTTCACCGGTTACGCGAGAGGTCCTCGTGGTCTCGACTGGGCCAATCAGCCTAATCCCTTCCGCCGTTACCTCTCTGCTCCTCTTCTTCCTCTCCAACACCCCAATCACGACGATGACGACAACGACGACTCTCCTCTCTACTCTTGTCTATTCGACTCGCTTCCTCCGCCCAAACCCATCTCTCTCGCTACCATCTCTCACCTTTTCTACCATTCTCTCGCTCTCTCCGCCTGGAAGACCACCGGATCCTCCACCTGGCCCCTCCGCGTCAACCCCAGCAGCGGTAACTTGCATCCCACCGAGGCCTATCTCATTGCTCCTCCCATCCCTTCCCTCTCCCAATCCGCTTTCGTCGCCCACTATGCTCCCAAAGAGCATTCTCTGGAGGTTAGAGCTCACATCCCCTCTTCCTTTTTCCCGGAGAATTCTTTTCTCATCGGCATTTCTTCTATCTTCTGGCGTGAAGCTTGGAAGTACGGAGAACGAGCGTTTCGGTACTGTAACCACGACGTCGGCCACGCCATTGCCGCTCTCTCCATTGCAGCCGCAGAGCTTGGCTGGGACTTGAAGCTTCTCGACGGCTTCGGAGCTGATGATCTCAAGAGGCTTATGGGGCTCCCTGAATTTCAGATACCTTCTTCTTCAGGTAAAGGTAAGCTCCCTGAGATTGAATTCGAGCATCCTGACTGCTTGCTCCTTGTTTTCCCCAACGGAACTAGTAGAGGAGATCTCAACTTAGACTACCTCGGAATTAGCTCTGCCCTAAGAGACTTCCCAAGCCTAGAGTGGAATGGAAACCCCAATACTCTGAGCAAAGAGCATCTGTGTTGGGATATCATCTATAGGACAGCCAAGGCTGTAGAAAAGCCTTCATTGATCTACTCAACATCTTCTTCATTTGATGCTCCCTTCACAAGCAGTGCTCTGTTTAGCCACACTTCTTATAACAAGTTAACGGCCAGGCAAGTTGTAAGGACGAGAAGAAGTGCTGTTGATATGGACGCTGTTACTTGTATAGACATGTCTGCGTTTTACCAGATATTGATGCACTGTCTTCCTTCTGGCTCCACGAGAGGGGAGCCCCAAAAAGAGCAACTTGCGCTGCCGTTTCGAGCTCTTCCTTGGGATACTGCTGAGGTTCATCTTGCCTTGTTTGTTCACAGAGTTTTGGGTTTACCAAAGGGACTGTACTTCCTAGTCAGAAACGAGGATCATCTCAGCGATCTCAAGACAGCTACGAGGCCTGAATTTGAGTGGAAGAAACCAGATGGATGCCCAGCCGATCTTCCTCTATACAAGCTCACCGAGGGTGATTGCCAGAAGCTGGCAAAAGGGCTATCATGTCATCAGGACATTGCAGGGGATGGATGCTTCAGCCTAGGTATGGTAGCTCGGTTTGAACCAGCGCTGCGGGAGAAGGGCTCATGGGTGTACCCTCGACTGTTCTGGGAGACGGGTGTTATTGGGCAAGTTTTGTACCTGGAAGCACACGCAATGGGGATCTCAGCAACCGGGATAGGGTGCTATTTCGATGATCCAGTGCACGAGGTTTTGGGGATAAAAGACTCTAGCTTTCAGAGTCTGTACCATTTCACTGTGGGAGGTCCAGTTGTAGACAAGCGGATCATGACTCTTCCTGCTTATCCTGGTCCTACCACCACCGTTGCCTAG
Protein Sequence:
- >333455|Arabidopsis_lyrata|C2H2|333455
MEERHKCKLCWKSFANGRALGGHMRSHMLPSQPESASSSMADPLQDRESETESSKKPTRKRSRLNRRSNEEGKSETAGAAEVKIGVQELSESCTEQEPMSSVCDAATEEEDVALSLMLLSRDKWEKEERGKNNKWFECETCEKVFKSYQALGEHRASHRKRRAETDQLVSDELKKKKKKTSHHECPICSKVFSSGQALGGHKRSHASASNDESTIRRSGIIISLIDLNLPAPSEEEDMASSRLIRLLSRRDVVKEHKKSKGEGRMTISWRLASSTSLLSIHRTPTSAFISAMTFSSSSSSSSLELVLEYHNQTKHSFTGYARGPRGLDWANQPNPFRRYLSAPLLPLQHPNHDDDDNDDSPLYSCLFDSLPPPKPISLATISHLFYHSLALSAWKTTGSSTWPLRVNPSSGNLHPTEAYLIAPPIPSLSQSAFVAHYAPKEHSLEVRAHIPSSFFPENSFLIGISSIFWREAWKYGERAFRYCNHDVGHAIAALSIAAAELGWDLKLLDGFGADDLKRLMGLPEFQIPSSSGKGKLPEIEFEHPDCLLLVFPNGTSRGDLNLDYLGISSALRDFPSLEWNGNPNTLSKEHLCWDIIYRTAKAVEKPSLIYSTSSSFDAPFTSSALFSHTSYNKLTARQVVRTRRSAVDMDAVTCIDMSAFYQILMHCLPSGSTRGEPQKEQLALPFRALPWDTAEVHLALFVHRVLGLPKGLYFLVRNEDHLSDLKTATRPEFEWKKPDGCPADLPLYKLTEGDCQKLAKGLSCHQDIAGDGCFSLGMVARFEPALREKGSWVYPRLFWETGVIGQVLYLEAHAMGISATGIGCYFDDPVHEVLGIKDSSFQSLYHFTVGGPVVDKRIMTLPAYPGPTTTVA*