Information report for 20533
Gene Details
Functional Annotation
- Refseq: XP_003061688.1 — predicted protein, partial
- TrEMBL: C1N0S1 — C1N0S1_MICPC; Predicted protein (Fragment)
- STRING: XP_003061688.1 — (Micromonas pusilla)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla013758
- Cucumis melo: MELO3C019813P2
- Raphanus raphanistrum: RrC1477_p6
- Vitis vinifera: VIT_13s0019g04530
Sequences
CDS Sequence:
- >20533|Micromonas_pusilla_CCMP1545|C2H2|20533
ATGGAAGAGGTGGGAACACAAGTGGCTTCCCCCTTATTTATACATCAGAATATCGGAGGCCGCTTTTGCGACGTTTCTTTGATTGGTACTAAGCGTAGTCTTTGTTATAGTACTACGAGTAATCATCAACAGCAGCATCAAATCCATCATCCCAGTCATGGCTGGAAGCTTAAGGATTGGGAATGGGATAGTACCCGATTTGTAGCCAGACCTAGACCTGTTGAACCTGATGTGCTTTGTTTGGGTACTCTGAATCAAGCCCCTTCTAATTGTAATGAAGCTGTGAATCCTATTTTATCCACTCCCCTTCCCTCGAAAAGCAGCAACCGTCTTGATGATGACAAACCGGCTGGCAGTATTCTTCGGTTACAGCTAGGTGGCTGTGGGATTGGAGACAGTGATGGTGCAGGAACTACTATCACAAAAACAAACACGGGAAATGCTCAGAACTCAAACTCAAAAGAGGATCCTGTTTCGTCTTCAAGGCCTAACAAGAAGGTTCGCTCTGGTTCTCCAGGTAGTGGTGGTAATTATCCCATGTGTCAGGTGGATAATTGTAGAGAAGATCTTTCTAAATCCAAGGATTATCACAGACGGCACAAGGTTTGCGAGTTTCACAGCAAGGCCACCAAAGCACTTGTTAGCAAGCAGATGCAAAGATTCTGCCAACAATGTAGCAGGTTCCATCCACTTTCAGAATTTGATGAAGGTAAAAGAAGTTGTCGAAGAAGGCTTGCTGGACATAATAAAAGAAGAAGGAAAACCCAGGCGGAGGACACTGCATCACCTGCTGTTCAAACAACTGACAACAATAAGCCTGGCTATGGAAATTTGGATATTGTCAACTTGTTGACAGTTTTAGCGCGTGGACAAGGGAATGCTGAGCTGAATGTTCCAACTTGCCCATCGTTACCTGATAAAAACCAGCTTATTCAAATACTTAGCAAGATAAATTCATTGCCTCTGCCAGCGGACATTGCAACAAACCCTCTTCTTTCATCATTTTCAGCTAGAAATGGCTTTGAGCAAGGTTCTTTGGATCCAAGCAATATGGATGTCAATGCAGCTTCAAGATCAACAACTGATCTCCTTGCCGTCCTTTCATCTACTTTGCCAGGATCTAGTCCCGAAACACTTGCATTCTTTTCCAATATGAATAATTCTGCTAGTTCTATGGACAAAAATATGTCACCTATTGTGGACAAAGATGACGCACATAAGAAACCGACTGTAGAGTTGCAGCCATTAGGAGGAGAAAAAAGCAGTTCAAGCTATCAATCTCCAACCGATGACTCAGATAGCCAAGTTCAAGATACTCGATTGAACCTACCTCTGCAGCTGTTTAGTTCATCGCCTGGAGAGGATAGCTCACCAAATTTGGCTTCTTCGAGGAAGTATTTCTCATCTGACAGCAGCAATCCTACTGAAGAGAGGTCCCACTCATCAACTGCTCCTGTCACTAGAAAATTGTTTCCTTTGGAAACCACCTCAGAGAGTGCTAGGCCTGTTAGAATGTCATTTGATGAGGAGGCTGTTGTAAATATTGAACAGAGCCAGACTGAGAACTCTGCTACGAGGATGACACTGGAGCTTTTTAGCATGGGAAAAAAGACTGTCTCAAATGCATTGCTAAACTTGCCACCACAAGCAGGGTACACTTCTTCATCTGGTTCTGATCATTCTCCACCCAGTTTTAACTCGGATCCTCAGAAGGATCGCACTGGCCGAATCATTTTCAAATTGTTCGACAAGGATCCCAGTCATTTTCCTGGAGCATTGCGTACGCAGATCTACAATTGGCTTTCTAACAGTCCTTCTGAGATGGAGAGTTACATAAGACCTGGTTGTGTGGTTCTCTCAATATATCTGTCTATGAAATCTGCTGCCTGGGAACAAATGGAAGAGAACTTTCTCCAACAAGTTGAAGCCTTGTTACAGTCTTCTGATGTTGAGTTCTGGAGAAGTGGGAGGTTTTCAGTGAACATTGGAAGGCAGCTAGCTATTCACAAGGATGGAAGGATACGGATTTGTAAACCATGGAGCACTGTGACTTCTCCAGAGTTGTTTATGGTTTCACCCCTGGCTGTTGTGAATGGAGAAAACACAACTCTTGTGCTTAGAGGCATGAACCTGACCTCTCCTGGAACCAAGATACATTGCACATACACTGGTAGCTACTCTTCAACTGAAGTTTTGCAATTTTCTGATCAAGGATTTACATATGACGAGATAAAATTAAATGAATTCAAAGTGTATGCTGCACCTTCTGCTCTAGGCCGTTGTTTTATTGAGGTAGAAAATGGTGTGAGAGGCAATTGCTTTCCTGTAATTATTGCAGATGTTGAAATTTGCCAGGAGCTGAGGCTCCTTGAGCGTGAGTTTTATGAAGCAAAAGTCTCTGATGTTGTTACTGATGTTCAGACTCCATATGTGGCAAGTCCGCATTCACATGATGAAGTTCTACACTTTTTAAATGAGCTTGGCTGGCTTTTCCAGAGACAATTATGTCCTGAAATTGCTGTTCATGATTATATGCTTCATCGTTTTCAGTATCTGTTGACTTTTTCCACCGAAAGAAATTACTGTGCTCTGGTGAAAAGACTTCTTGATATATTTATTGAATCCGAGTCTAGAATGGATGGGTTATCAACAGAATGCATGGAAGCACTTGCCAATATGCGCCTCTTGCACAGAGCAGTGAAGGGGAGATCAACGAAGATGGTCGACTTGCTCATTCATTACTCGGCACCCTGTGGCAGTATTACGTCAAAAAAATACATTTTCCCTCCAAATCATCGAGGACCTGGGGGCATTACTCCTCTGCATTTGGCTGCCTGTACATCAGACTCGTATGAAATTGTGGATGTTCTGACTGGTGATCCCATGCAGATTGGACTTCATAGCTGGAGGTTCCTTCTGGATGATAATGGGCAGTCTCCATATTCTTATGCTGTGATGAGAAATGATCATGCATTGAACAACATTGTGGGTCAAAAGCTTGCTGACAAAACAAACAGTCAAGTCTCCATAAACATCGGCAATGAGATTGTTGAATCTGCTGTACCAGCAGAGGTGAGACAAAGATCAAGCCTCCAGTTGAACACAAAGCAAAACTCTTGTTCGAAGTGCGTGATGATGAGATACAGTAGGATGCCTGGCTCCCAAGGTTTTCTTCATCGTCCATTCATTCACTCAATGCTGACTATCGCAGCAGTATGCGTTTGTGTCTGCCTGTTCTTTAAAAGTTTGCATGTTAATTCAGTTTCATTCATGTGGGAACATGTGGATTTCGGGGCTATGTAG ATGGATAACAACGATGAGATTATGCTGGCGGAGATGACGCCGAAGAGGCGTGCGGGACGGAGAGTGTTCAAGGAGACACGTCACCCAGTTTACAGAGGAATACGGCGGAGGAACGGCGACAAATGGGTCTGCGAAGTCCGAGAGCCGATCCACCAGCGCCGCATTTGGCTCGGGACTTATCCCACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCTTATGCTCTGCGCGGGAGATCCGCGTGTTTGAATTTCGCCGACTCTGCCTGGCGGCTTCCGGTACCGGAATCAACCGATCCCGATGTCATCAGGAGAGTCGCGGCGGAAGCTGCGGAGATGTTCAGGCCGACGGAATACGAGAGCGGAATTACGGTTTTGCCCTCTTACGGGGATGAGGTGGACTTGGCTTTTGGTTCTGGTTCTGGTTCGGGATCGGAGGAGAGGAATTTGCATGGGTATGTGGAACAAGAAGAAGAAGAGGTTTCCACGACGATGATGAGACTCGCGACGGAGCCGTTAATGTCGCCGCCGAGATCGTACATGGAAGGCATGACTTCTAATACTTACATGGAAGAAGACATGTCTTACCAAGATATGTCACTGTGGAGTTACAACTATTAA ATGAAGAAAGGTGATTCTTCTGATGATCGTCTCCCAAAGTTCTTCAAAGTGTACTTACCCAACGACTCAGGAGACGATCTGGAGATACCTGTCTCGTTCAACAGCTGTTTACCGAGCTCTGTTCCTAAGAGCGTAACCGTTACAAACATCAACGGACACGTCTGGAAACTGAAGTTGAAGAAACTTAGTGGCGATCCTGAGAAGTTCTCTATGGTTGATGGGTGGAAGAGGATCGTCAAGGACGAAGATCTGAAAGGAGGAGAGTTCTTGGCTTTCGAGTTCGATGGCTCTCGTCTCTTCAACTTCTGTGTTTACGGCCAAGCCACGTGTAAAAAGCTTGGTAAGTCCGCAGAGGTTGATGATGATGATGACGATGATGATGATGTCATTGTTATTGATGATGATGATGATGATGATGATGATGAAGATGATGATGGTGATGATGATGAGGCTGCTGATGATGAGGATGTGGATGTTGATGTTGATGTTGAGGCTGATGATGTCGATGATGGTATGGAGACTGATGATGGTGATGAACATAGGCAGCTTCTGGATGATCCGGATAGCCCGTCCTTTACTGTGATCCTTAACCCGAAGAAAAAGAGCCAACTGCTCATCCCATCTCACATTATGAAAGACTACAACTTACACTTTACTGAGAGAATAACTATCGTCGACCCGCTCGTGCCCAAGTTCGGGACGTTGGAGAGGAAAATCAAGCTTCAGGATAACGGATGTCTGTTCGTCAAGGGCTTTGGAAGTGTCTTCAGAAGGAACAACGTGAAGACTACTGATACGATTATATGCGAGGTGAAGAAGAATGGCAATGATGTTGCTCACATTCTCAAGGTCCACATTGTTAGGGGATTATGA ATGGGCGCGGCGACGCGACCGCTCGGCGCCCCGCCGCCGTCCAAGCCGCCGAGAGGAAAGGTCGCGTGCGAGCACCCCGGATGCGGCAAGGAGTTCGCGTGGGCGCAGGACCTCGCGAAGCACGTCCGAAGAGCGCACTCGGGCGAGGCGCCAAAGTTTCAATGCTCGCACGACGGATGCGAGAAGCGATTCTACGAGCGGAAGCTCCTCGTCGCGCACGAGCGCACGCACACGGACGAGCGGCCGTTCGCGTGCGCGCACCCGGGGTGCGGTAAGACGTTCCGCGCGAGGAACTCGCTGACGTACCACGTCAAGGCGATGCACTCGCGCGCCGAGACGCTGCGATGCGACGTCGACGGGTGCGCGTTTACCACGAAAAAGCCTGAGCTGTTGGCGTCGCACCGCGCCAAGCACGCGCGGCGCGTCACGGAGCGCGCGTGGAAG ATGGCGAGAGAGAAAATTCAGATCAGGAAGATCGATAATGCAACTGCGAGGCAGGTGACCTTCTCGAAGAGAAGAAGAGGGCTTTTCAAGAAGGCCGAAGAGCTCTCCATCCTCTGTGACGCTGAGGTTGCTCTCATCATTTTCTCTTCTACTGGAAAGCTTTTCGAGTATTCCAGCTCAAGTATGAAGGAGATACTTGAAAGACATAATCTACACTCAAAGAACCTTCACAAACTGGATCAACCTTCTCTTGAGCTACAGCTAGAGAACAGCAACTATGCGAGATTGAGCAAGGAAGTTGCAGAGAAAAGCCATCAACTGAGGCAAATGAGGGGAGAAAACCTGCAAGGGTTAAATATTGAAGAACTTCAGCAACTAGAGAAGTCCCTGGAAACTGGTTTGAGCCGTGTGCTAGAAACAAAGGGTGAACGAATTATGAAAGAGATCAGTACACTACAGAGAAAGGGAGTGGAATTGTTGGAGGAGAATGAGCGATTGAAACAGCAAATGGCCAGTCATCCGACTCCGTCACCAATGTGTGCAGCTCCATTGGTCCGCCTCAAGATTATGACAGCTCTGATACCTCACTTAAGTTGGGTCTACCCTATTCAAGCTGAAGGTGTCGACGAAATCAAGCCGAAATGCACTAATCACTTCAAGGGGATTGTCCACAGAGATATTAAGGGGGAAGCTATTAACTAG
Protein Sequence:
- >20533|Micromonas_pusilla_CCMP1545|C2H2|20533
MGAATRPLGAPPPSKPPRGKVACEHPGCGKEFAWAQDLAKHVRRAHSGEAPKFQCSHDGCEKRFYERKLLVAHERTHTDERPFACAHPGCGKTFRARNSLTYHVKAMHSRAETLRCDVDGCAFTTKKPELLASHRAKHARRVTERAWK