Information report for Pgl000101
Gene Details
Functional Annotation
- Refseq: XP_010263926.1 — PREDICTED: probable serine/threonine-protein kinase mps1
- TrEMBL: A0A2G5ENC0 — A0A2G5ENC0_AQUCA; Uncharacterized protein
- STRING: Aquca_006_00159.1 — (Aquilegia coerulea)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
- Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn340751
- Juglans regia: WALNUT_00012916-RA, WALNUT_00003890-RA
- Manihot esculenta: Manes.11G081300.1.p
- Nicotiana benthamiana: Niben101Scf00466g04027.1
- Nicotiana tabacum: XP_016480187.1, XP_016480186.1, XP_016480185.1, XP_016442558.1
Sequences
CDS Sequence:
- >Pgl000101|Picea_glauca|bZIP|gnl|UG|Pgl#S55330511;gnl|UG|Pgl#S55347323;PUT-175a-Picea_glauca-31366;PUT-175a-Picea_glauca-31367
ATGGAGGAAATGGACAATAGTTATGGCGATCTTATGCAGAGGCTTCAGTCTTCTCTTGGGACTTCATCTTCATTCATTCCTAAGCAGCAATTAAATAAATCTGAACCTTCGTCGCCGGCTATTAGTCAAACTCGCCCCCCATTTACTGCAAATATTCCGAATTTTAACCCCGGAGGCAAAAGGCAGGGGATCCCTCCTTCACATCCTCACTTTCCTCCCACTTCGCCTCACTCACAAACATTCTTCACTCAGATGCCTGTTTTACAGTCACCGGTACAGCAGAATTCTCAGAATCAGCAGCATTCCAATGCTAGTCCTAATTCTTTGCATTCTCGATCGATGTCCCAGCCACATATTTTTAACTTGGATAACCTGCCTCCTCTCAATCCCTGTTCATATCGGGACCCTTCATCGCCATCTTTATCGGACCCTGTATCTGGTGATGTTTCCATGGAAGATCAAGAAGGCAGCTCCGCAGTCCCATCAATTTCTCCCCATAACCCTTCTTCCCTCTTCGCCGGTGGTAGAAGATCTCCAAATCATATGAGTGACGGCCTCCCCCCTAGAAAAGGACATAGACGAGCACGCAGCGATAATCCTTTCACATTTATGTCCGGATCTCAGTCCCTATCTGGAGATATCCAACAAGGGTTTGGGAGCTCTTTGGAGACAACCTCTGTCAAAGGAACTGCTCAAATGGATCATCTGAATCAATACGTTTCATCCTTGGAACGTGAAAAACCTAAGGCCCGGGTGGTGAAAGCGGAGTTGAATCAGGAAAGGAATATTATTCAGAATGTAGAAGGCATGGGAGAAGGAGAAACAGGAAGAGAAATAGGTGAAGATATGGTTTCTGCTTGCATTGATGTAGACAAAATGAACAACTTGAACAAGCCGAGGCCGGCAAGTGGAGAGCTGCCGGACAATTTGAATGGAGTTCAGGAAGACAGTGGTGGAAGTAGTGTTAAACAGAAGAACTTGAAAGACGCGGACCAATTTAGCAGTAGTGACGAAGCTGACAGTGAGGTCAATGAGTTCGACATCATGAAAAGGAGCAATTCAGGGGTTGGATATGAAGAGAACAAGAGAAGTGCGGGTCAAGGTGATGGCAGTCAGTATCTTAACAGGTCACGTCACTCTCGGAGCGTCTCCATGGATAGCATTATGAGCAAGATGCATAACTTCAGTGAAGACTTAGAACAGGAACCGTCCCAAGGTCGGAATGTCAGGCACTCTCATAGCAATTCGATGGATGGAAGTACAAGTTTCAATGTGGAATTCGGGAATGGGGAGTTCAGTGCATCTGAGATGAAGAAGATCATGGCCAGTGAGAAACTCGCAGAGCTTGCATCGGTGGACCCTAAACGTGTCAAAAGGATATTGGCCAATCGTCAGTCGGCTGCACGCTCCAAGGAAAGAAAGATGCGATATATCTCAGAGCTGGAACGCAAAGTCCAGACCTTGCAAACTGAGGCAACAACTTTGTCCGCACAGCTGACTCTTTTGCAGAGGGATTCAGCTGGGATTGGTAGTCAGAACCATGAGCTCAAGTTACGCCTACAGACCATGGAACAGCAAGCACAACTTCGTGATGCATTGAATGAGGCACTCGGGGAGGAGGTCCAACGGTTGAAATTGGCCACAGGGCAGCTAGGTGCTGGTCAATCTGCCAGTCTAGCTCAGCAAATGTCCATGAATTCACCATTATTTCAGCTTCAGCAGCAGGGTCCACATCATCCTCATCATCCTCTTTATCAATTGCAGCAACAACAGCAACAGCAACAGCAACAGCAGCAACAGCACCAAGTCAAATACAGTCAACAACCTCCAGGGAAGCAAACTAATCGAAATGAAGTTCTCCAAACGACATACACTTCTCTCCCTGGTCCTGTTGGGTCCTCAGGCAAGCCAGATAATTCAAATATGAGTGCTAGCCAAGGGAGTGATTGTTCTTTTTGA
Protein Sequence:
- >Pgl000101|Picea_glauca|bZIP|gnl|UG|Pgl#S55330511;gnl|UG|Pgl#S55347323;PUT-175a-Picea_glauca-31366;PUT-175a-Picea_glauca-31367
MEEMDNSYGDLMQRLQSSLGTSSSFIPKQQLNKSEPSSPAISQTRPPFTANIPNFNPGGKRQGIPPSHPHFPPTSPHSQTFFTQMPVLQSPVQQNSQNQQHSNASPNSLHSRSMSQPHIFNLDNLPPLNPCSYRDPSSPSLSDPVSGDVSMEDQEGSSAVPSISPHNPSSLFAGGRRSPNHMSDGLPPRKGHRRARSDNPFTFMSGSQSLSGDIQQGFGSSLETTSVKGTAQMDHLNQYVSSLEREKPKARVVKAELNQERNIIQNVEGMGEGETGREIGEDMVSACIDVDKMNNLNKPRPASGELPDNLNGVQEDSGGSSVKQKNLKDADQFSSSDEADSEVNEFDIMKRSNSGVGYEENKRSAGQGDGSQYLNRSRHSRSVSMDSIMSKMHNFSEDLEQEPSQGRNVRHSHSNSMDGSTSFNVEFGNGEFSASEMKKIMASEKLAELASVDPKRVKRILANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLTLLQRDSAGIGSQNHELKLRLQTMEQQAQLRDALNEALGEEVQRLKLATGQLGAGQSASLAQQMSMNSPLFQLQQQGPHHPHHPLYQLQQQQQQQQQQQQQHQVKYSQQPPGKQTNRNEVLQTTYTSLPGPVGSSGKPDNSNMSASQGSDCSF