Gene Details:

  • Gene ID: PEQU_23142
  • Gene Family: bZIP Family
  • Description: bZIP Family protein
  • Species: Phalaenopsis equestris
  • Source: bZIP family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_020577095.1  — transcription factor TGA1-like
  • Refseq:  XP_020577096.1  — transcription factor TGA1-like
  • Refseq:  XP_020577097.1  — transcription factor TGA1-like
  • Swissprot:  Q39237  — TGA1_ARATH; Transcription factor TGA1
  • TrEMBL:  A0A2I0WFA8  — A0A2I0WFA8_9ASPA; Transcription factor TGA1
  • STRING:  XP_008801018.1  — (Phoenix dactylifera)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0042742  — Biological Process — defense response to bacterium
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0043565  — Molecular Function — sequence-specific DNA binding
  • GO:0044212  — Molecular Function — transcription regulatory region DNA binding

Family Introduction:

  • The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
  • Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.

Literature:

Sequences:

CDS Sequence:
  • >PEQU_23142|Phalaenopsis_equestris|bZIP|PEQU_23142
    CAGGTTTTAAGACGCCTTGCACAAAATCGAGAGGCAGCTCGGAAAAGTCGCCTTCGAAAAAAGGCTTACGTTCAACAACTAGAAAGCAGTCGTATAAAACTTGCTCAAGTAGAACAGGAGCTTGAAACAACTAAACAACAGGAACTGCTCCAGGTCCCTTATGACCGTGCTGATCTCTATCTCCAGGAAACTTCATGGCGACGTGGAGTGGCTGCTTTTGAGATGGAATATGGGCATTGGGTTGAAGAACAAAATAGACAGATTTGTGAACTTAGGGCTGTCCTACAAACACATGTATCTGAAATAGAACTTCGGATGCTTGTAGAAAGTGGAATGAACCATTATTATGATCTCTTCCGTATAAAAGCAATTGCTGCAAAATCTGATGTTTTCTATCTAATGTCTGGCTTGTGGAGGACAGCATCAGAGCGCTTTTTTCTCTGGATTGGAGGATTTCGTCCTTCAGAACTTTTAAAGGTTCTAACCCCACAGTTTGACCCTTTAACGGAGCAGCAGGTAGTTGCTGTGTGTAACCTGCAGCAATCATCTCAGCAAGCTGAAGATGCCCTTTCACAAGGATTGGATAAGCTTCAACAAACGCTTGCTGAGATACTGACAAGAGAACCGCTGGGTTCTTCCGGTACAGAGAATTATATGGAGAATTATATGGGGCAAATGGCAAATGCGATGGGTCAGTTGGATGCCCTAATAGGCTTTGTGAACCAGGCTGATCATCTGAGACAACAGACCATGCAGCAAATGTACAAGATTCTGACCACTCGACAGGTCGCTCGCGGATTGCTCGCATTGGGCGATTATTTCCAACGGCTCCGGGCATTGAGCTTGCTATGGGAAGCTCGGCCTTGCGAG
Protein Sequence:
  • >PEQU_23142|Phalaenopsis_equestris|bZIP|PEQU_23142
    QVLRRLAQNREAARKSRLRKKAYVQQLESSRIKLAQVEQELETTKQQELLQVPYDRADLYLQETSWRRGVAAFEMEYGHWVEEQNRQICELRAVLQTHVSEIELRMLVESGMNHYYDLFRIKAIAAKSDVFYLMSGLWRTASERFFLWIGGFRPSELLKVLTPQFDPLTEQQVVAVCNLQQSSQQAEDALSQGLDKLQQTLAEILTREPLGSSGTENYMENYMGQMANAMGQLDALIGFVNQADHLRQQTMQQMYKILTTRQVARGLLALGDYFQRLRALSLLWEARPCE