Gene Details:

  • Gene ID: OMERI06G27590.3
  • Gene Family: bZIP Family
  • Description: bZIP Family protein
  • Species: Oryza meridionalis
  • Source: bZIP family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_015642502.1  — endoplasmin homolog
  • Swissprot:  P36183  — ENPL_HORVU; Endoplasmin homolog
  • TrEMBL:  A0A0E0E6F4  — A0A0E0E6F4_9ORYZ; Uncharacterized protein
  • STRING:  ONIVA06G30100.1  — (Oryza nivara)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0006457  — Biological Process — protein folding
  • GO:0009306  — Biological Process — protein secretion
  • GO:0009409  — Biological Process — response to cold
  • GO:0009414  — Biological Process — response to water deprivation
  • GO:0009651  — Biological Process — response to salt stress
  • GO:0009934  — Biological Process — regulation of meristem structural organization
  • GO:0010075  — Biological Process — regulation of meristem growth
  • GO:0034976  — Biological Process — response to endoplasmic reticulum stress
  • GO:0046686  — Biological Process — response to cadmium ion
  • GO:0005634  — Cellular Component — nucleus
  • GO:0005739  — Cellular Component — mitochondrion
  • GO:0005774  — Cellular Component — vacuolar membrane
  • GO:0005783  — Cellular Component — endoplasmic reticulum
  • GO:0005886  — Cellular Component — plasma membrane
  • GO:0009506  — Cellular Component — plasmodesma
  • GO:0009507  — Cellular Component — chloroplast
  • GO:0048046  — Cellular Component — apoplast
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0005524  — Molecular Function — ATP binding
  • GO:0016887  — Molecular Function — ATPase activity
  • GO:0043565  — Molecular Function — sequence-specific DNA binding
  • GO:0051082  — Molecular Function — unfolded protein binding

Family Introduction:

  • The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
  • Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.

Literature:

Sequences:

CDS Sequence:
  • >OMERI06G27590.3|Oryza_meridionalis|bZIP|OMERI06G27590.3
    ATGGCGGGGCTCTTGACGAGAAGGGCAGCGTCGTGTGCTCTCCATTGCCAGCTGCCGGCGGCCATGGATGACGGGGACCTCGATTTCTCCAACCCGGACACATTCCTCTGCCCGGCCGTCGGTGGTGCTGACCCCGACGGCAGCTGCTCCATGGACAGCTATTTCGACGACATCCTGAAGGATACGGAGCACCATGCATGCACCCACACCCACACCTGCAACCCGCCTGTGCATGACCTCTCACACACCCACACCTGCGTCCATGTCCACACCAAGATCGTCTCCGCCCCATCCGACACTCCGTCGGATGCTGCCGAGACCGCCGAGTCCCCGACGGAGAACAATGCCTCCAAGAAGCGGCCGTCGGGTAACCGCGCCGCTGTGAGGAAGTACAGGGAGAAGAAGAAAGCTCACACTGCCTCGCTGGAGGAGGAGGTTGTTCATTTGAGGGCTCTAAACCAGCAGCTCATGAAGAAGCTCCAGAACCATTCCACGCTCGAGGCAGAGGTATCCAGGCTGCGGTGCCTGCTCGTTGATATTAGAGGAAGGATTGAAGGAGAGATTGGGGCTTTTCCTTATCAGAGGCCAGTGAAGAACATCGATTTGGTTTCTAGTGTTGATCAGGGAAGTTATCTTGGTGGTGCCCAGGTTATGAACTCCTGTGACTTTCGATGTGCCGACCAGATGTATTGCAGTCCAGGGATGCAGGTGAGAACAATGGGTGAGGATGGCGCTGTGAGTGGTCAGGTGTTGGGGCAAGCTAAGAAGCTCCAAGTCAATGCTGATGACAGCACTGATGAGTTAGTTGATCCGCCGAAGGTAGAGGAGAAGATTGGTGGTGTTCCCCATGGCCTGTCCACCGACTCTGAGGTTGTTCAAAGGGAGGCTGAGTCGATCTCGAGGAAGACCCTCAGGAGCTCGGCGGAGAAATTTGAGTTCCAGGCTGAGGTGTCCAGACTTATGGACATCATCATCAACTCACTCTACAGCAACAAGGACATTTTCCTGAGGGAGCTCATCTCCAATGCTTCCGATGCTTTGGACAAGATTAGGTTCCTGGCTCTCACTGATAAGGAGGTTTTGGGTGAAGGCGACACTGCCAAGCTTGAAATCCAGATTAAGCTGGATAAGGAGAAGAAGATTCTCTCCATTCGGGATAGGGGTATTGGTATGACCAAGGAAGATCTCATTAAGAACCTTGGGACCATTGCCAAATCTGGAACTTCAGCTTTTGTGGAAAAGATGCAGACTGGGGGTGACCTCAATCTCATTGGGCAATTCGGTGTTGGTTTCTATTCAGTATACTTGGTTGCTGACTATGTTGAAGTGATCAGCAAGCACAATGACGACAAACAACACGTCTGGGAGTCCAAAGCTGATGGATCATTCGCTATCTCTGAGGATACATGGAATGAACCCCTGGGCCGTGGAACTGAAATAAGACTGCACCTCCGAGATGAAGCCAAGGAGTACGTGGAAGAAGACAAGCTAAAGGATTTGGTGAAGAAGTACTCTGAGTTCATCAATTTCCCCATTTACTTGTGGGCAACCAAGGAGGTTGATGTGGAAGTGCCAGCTGATGAGGATGAGTCAAGTGAATCAAGTGAAGAAGAGGAATCATCCCCTGGGTCTACAGAGGAAGAAGAGACAGAAGAGAGTGAAGAGAAGAAGCCCAAGACAAAGACAGTAAAGGAAACCACTACTGAGTGGGAGCTTCTGAATGATGTGAAGGCTATATGGCTTCGTAGCCCTAAGGAGGTTACTGAAGAAGAATACACAAAGTTTTACCACTCACTTGCTAAGGACTTTGGTGATGACAAGCCCTTGTCTTGGAGCCACTTCACTGCTGAGGGAGATGTTGAGTTCAAAGCTTTGCTCTTTGTTCCTCCCAAGGCTCCACATGATCTCTATGAGAGTTACTACAACTCTAACAAGTCAAACCTTAAGTTGTATGTTAGAAGGGTTTTCATCTCTGATGAATTTGATGAGCTTCTTCCGAAGTATCTCAGCTTTTTGAAGGGTCTCGTTGACTCGGACACATTGCCTCTCAATGTATCACGAGAAATGCTCCAACAACATAGCAGTCTGAAGACCATCAAGAAGAAACTAATCCGCAAAGCTCTTGACATGATTAGAAAACTTGCTGAGGAAGATCCTGATGAGTACAGCAACAAAGATAAGACAGATGAAGAAAAAAGTGCAATGGAGGAGAAAAAGGGCCAGTATGCCAAGTTCTGGAATGAGTTTGGAAAATCAGTCAAGTTGGGCATCATTGAAGACGCAACTAACAGGAACCGTCTTGCAAAGCTTCTGAGATTTGAAAGTACCAAGTCGGAAGGCAAACTTGCCTCTCTTGATGAGTACATTTCAAGGATGAAGCCAGGGCAGAAGGACATCTTTTACATTACCGGAAGCAGCAAGGAACAATTAGAGAAATCACCGTTCCTTGAGAGGCTAACCAAAAAGAACTACGAGGTTATTTACTTCACTGACCCTGTTGACGAGTACTTGATGCAATACCTCATGGACTACGAGGACAAGAAGTTTCAGAACGTCTCCAAGGAGGGTCTCAAGCTCGGCAAGGACTCCAAGCTCAAGGACCTCAAGGAGTCCTTCAAGGAGCTGACCGACTGGTGGAAGAAGGCTCTAGACACCGAGAGCGTGGACTCGGTGAAGATCAGCAACCGGCTGAGCGACACCCCCTGCGTGGTGGTGACATCCAAGTACGGGTGGAGCGCCAACATGGAGAAGATCATGCAGTCGCAGACCCTCTCGGATGCCAGCAAGCAGGCGTACATGCGCGGCAAGAGGGTACTCGAGATCAACCCCAGGCACCCCATCATCAAGGAACTCCGTGACAAGGTCGCCCAGGACAGCGAGAGCGAGAGCTTGAAGCAGACGGCGAAGCTGGTGTACCAGACGGCCCTCATGGAGAGCGGCTTCAACCTGCCTGATCCCAAGGACTTCGCCTCCAGCATCTACAGGTCGGTGCAGAAGAGCCTTGACCTGAGCCCCGACGCGGCCGTGGAAGAGGAAGAGGAGGTCGAGGAGGCCGAGGTTGAAGAGAAGGAATCATCCATCAAGGAGGAGGCGGAGCCGTCGTCGTATGATAAGGACGAGCTGTAG
Protein Sequence:
  • >OMERI06G27590.3|Oryza_meridionalis|bZIP|OMERI06G27590.3
    MAGLLTRRAASCALHCQLPAAMDDGDLDFSNPDTFLCPAVGGADPDGSCSMDSYFDDILKDTEHHACTHTHTCNPPVHDLSHTHTCVHVHTKIVSAPSDTPSDAAETAESPTENNASKKRPSGNRAAVRKYREKKKAHTASLEEEVVHLRALNQQLMKKLQNHSTLEAEVSRLRCLLVDIRGRIEGEIGAFPYQRPVKNIDLVSSVDQGSYLGGAQVMNSCDFRCADQMYCSPGMQVRTMGEDGAVSGQVLGQAKKLQVNADDSTDELVDPPKVEEKIGGVPHGLSTDSEVVQREAESISRKTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEDESSESSEEEESSPGSTEEEETEESEEKKPKTKTVKETTTEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKDKTDEEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKPGQKDIFYITGSSKEQLEKSPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTDWWKKALDTESVDSVKISNRLSDTPCVVVTSKYGWSANMEKIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEAEVEEKESSIKEEAEPSSYDKDEL