Information report for KN538686.1_FGP163
Gene Details
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Functional Annotation
- Refseq: XP_025879520.1 — glucose-6-phosphate 1-dehydrogenase 4, chloroplastic
- Swissprot: Q93ZW0 — G6PD4_ARATH; Inactive glucose-6-phosphate 1-dehydrogenase 4, chloroplastic
- TrEMBL: A0A0E0CZR5 — A0A0E0CZR5_9ORYZ; Glucose-6-phosphate 1-dehydrogenase
- STRING: EMT03892 — (Aegilops tauschii)
- GO:0006006 — Biological Process — glucose metabolic process
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0004345 — Molecular Function — glucose-6-phosphate dehydrogenase activity
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0050661 — Molecular Function — NADP binding
Family Introduction
- The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
- Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g64060.3.p, Bradi1g64060.1.p
- Oryza sativa: OsG6PDH5, OsG6PDH3, OsbZIP28;OsbZIP1
- Panicum virgatum: Pavir.9KG422700.1.p
- Triticum aestivum: Traes_4DL_73DC40D7B.1
- Vitis vinifera: GSVIVT01030079001
Sequences
CDS Sequence:
- >KN538686.1_FGP163|Oryza_longistaminata|bZIP|KN538686.1_FGP163
ATGGCAGATGCTAGTTCGAGGACTGACACATCAACAGTCCTGGATACCGACGATAAGAATCAGATGGCACATCATTTTGATATCAATTTTGTGAAGAATTTGATTATTAAGGTAGACGGGCAAAGTGGAGCTATTGTGCCTTCTAATTCATCTGATCGGTCTGACAGATCTGACAAGCCCATGGACCAAAAGGTGTTACGCCGGCTTGCTCAAAATCGTGAGGCTGCAAGAAAAAGTCGGCTGAGAAAAAAGCACTTAAACTGCCTCTTTTTTTTATCGTTTTATGATATTATGGGAATTACAAAAGAATTCCAGAAGGCATATGTACAACAATTAGAGAGCAGTAAGCTGAAACTTGCAAGCTTGGAGCAAGAGATCAATAAAGCTCGCCAACAAGGAATTTACATTTCGAGCTCAGGAGACCAAACTCATGCTATGAGTGGAAATGGAGCTATGACTTTTGATTTAGAATATGCCCGTTGGTTGGAAGAACAAAACAAGCAGATAAATGAGCTGAGGACTGCAGTAAATGCTCATGCAAGTGACAGCGACCTCCGTCTCATTGTAGATGGGATAATGGCGCATTACGATGAGATATTCAGGCTGAAGGGTGTTGCCGCAAAGGCTGATGTGTTTCATATACTTTCAGGCATGTGGAAAACACCTGCTGAAAGGTGCTTCTTGTGGCTTGGGGGTTTTCGTTCCTCTGAGCTTCTAAAGCTTCTTGTGAATCAGCTCGAGCCATTAACTGAGCAGCAGTTGTTGGGACTATCGAACCTCCAACAGTCCTCTCAGCAGGCTGAAGATGCTCTATCACAGGGAATGGAAGCGTTGCAACAATCCTTGGCAGATACGTTGGCCGGGTCCCTTGGTCCATCAGGATCTTCAGGGAACGTGGCAAACTACATGGGTCAAATGGCTATGGCCATGGGCAAACTTGGGACCCTTGAGAATTTCCTCCGTCAGTGTGCGCAGGTTGCAGGACCTGCTGCCAATTTTAGAACACGAGTTTGTGGACTGAGATGTTTGATCGCTGCAAAGCTGAAGTTCCGGAAGACCTTGAAGAGGCATGGATGGCAGCTTCGAAGGAATCTAGAAGTCCGAGCCAATGATAAAGTGCCTGATTGGTTGGAGGCTACACCACTGACTGAGAATATAATGTCTCGGGACGTACAACTCGCGTATGATTCTGGAGGTGAAACATCAAATACATGCCCTGATACTTTGGACAGTTCAGTCATTGAGCAAAGTTCAATGCATCACAAACTTAACCCCCCTGAAACCCATCCTCCTGTGCTGAAGGAAGACCCTGTTCTATTTGACGACCCACCTGAAAGTGCAGCGCCTCTTTGCATTGCTGTAATTGGAGCAACTGGTGAACTGGCAAAAAATAAAGTGTTCCCTGCACTATTTGCTCTGTATTACAGTGGTTTTCTTCCTCAGAATGTCGGTATATTTGGGTATTCTAGGAAGACACTAATAGATGAAGATTTAAGATCCATGATTGAAGCCAATTTGACCTGCCGGGTTGACCACCACGAAAACTGTGATGAAAAGTTAAATGAATTTCTTAAAAGGACATACTATATAGATGCAGGATATGACAACAAAGATGGGATGGTGAAATTAAATTCCAGAATGTCACAGATAGAGGGTAATTGTGCAGCAAACAGGATATTTTACCTTGCTGTTCCCCAAGAGGCACTTCTTGATGTTGCACTGTCACTAGCTGACAGTGCCCAAACTACGCAAGGCTGGAATAGGATAATAATTGAGAAACCATTTGGCTTCACTGGTTTGTCTTCACATCGGGTAACACAGTCACTGCTGTCAAGATTTGAGGAGGAGCAGATTTACAGGATTGATCATCTTTTGGGGAAGGATCTGATTGAAAATCTCACCGTCTTGAGATTTTCTAATTTGGTGTTTGAACCTTTGTGGAGTCGCACCTATATACGCAATGTACAGGTCATATTTTCTGAAGAAACAGCAGCAGAAATCCAAGGGAGATACTTTGGAAATTATGGCATAATTCGTGACATAGTGCATAGTCACATTCTTCAAACAATAGCACTATTTGCGATGGAACCACCTGTAAGCCTTGATGGAGAGGATATCCGAGATGAAAAGGTGAAGGTGCTCAGATCAATTCGACAGGTGAACCTTGAGGATGTTGTTCTTGGTCAACTGAAAGATACCTCTGTGAAAGTTGACAGATATACAAAATCATTGACACCAACCTATTTTGCTGCTGCCATGTACATTGACAATTCGCGTTGGGATGGAGTACCATTTTTGATCAAGACAGGAATTGGGCTCATGGAAAATAGAGCTGAGATTCGTATTCAGTTTCGCCATGTTCCTGGCAATATCTATCGTGAACGCTTTGGCCATGACATAGATCTTGACACAAATGAGCTGATCTTGCGTGATCAACCTGAAGAAGCCATCCTCTTGAAAGTCAACAATAAGGTCCCAGGACTTGGGCTCCAGTTAGATGCTTCAGAACTCAACCTGCTTTACAGGGATAGGTACAATGTCGAACTGCCAGATTCGTATGAGCATCTTCTTCTTGATGTGCTTGATGGAGACAGTCATCTATTCATGCGCAGTGATGAAGTAGCTGCTGCATGGAACGTGCTAACTCCACTAATCCATGAGATTGATCAGAATAGAATAGCTCCTGAGCTCTACGAGGCTGGGGGTAGAGGACCCGTTAATGCGTACTACCTTGCTGCTAAACATGGGGTCAGATTGGATGATGAATGGTGA
Protein Sequence:
- >KN538686.1_FGP163|Oryza_longistaminata|bZIP|KN538686.1_FGP163
MADASSRTDTSTVLDTDDKNQMAHHFDINFVKNLIIKVDGQSGAIVPSNSSDRSDRSDKPMDQKVLRRLAQNREAARKSRLRKKHLNCLFFLSFYDIMGITKEFQKAYVQQLESSKLKLASLEQEINKARQQGIYISSSGDQTHAMSGNGAMTFDLEYARWLEEQNKQINELRTAVNAHASDSDLRLIVDGIMAHYDEIFRLKGVAAKADVFHILSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLLGLSNLQQSSQQAEDALSQGMEALQQSLADTLAGSLGPSGSSGNVANYMGQMAMAMGKLGTLENFLRQCAQVAGPAANFRTRVCGLRCLIAAKLKFRKTLKRHGWQLRRNLEVRANDKVPDWLEATPLTENIMSRDVQLAYDSGGETSNTCPDTLDSSVIEQSSMHHKLNPPETHPPVLKEDPVLFDDPPESAAPLCIAVIGATGELAKNKVFPALFALYYSGFLPQNVGIFGYSRKTLIDEDLRSMIEANLTCRVDHHENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSRMSQIEGNCAANRIFYLAVPQEALLDVALSLADSAQTTQGWNRIIIEKPFGFTGLSSHRVTQSLLSRFEEEQIYRIDHLLGKDLIENLTVLRFSNLVFEPLWSRTYIRNVQVIFSEETAAEIQGRYFGNYGIIRDIVHSHILQTIALFAMEPPVSLDGEDIRDEKVKVLRSIRQVNLEDVVLGQLKDTSVKVDRYTKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLMENRAEIRIQFRHVPGNIYRERFGHDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDASELNLLYRDRYNVELPDSYEHLLLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIAPELYEAGGRGPVNAYYLAAKHGVRLDDEW