Gene Details:

  • Gene ID: Glyma.13G085100.3.p
  • Gene Name: GLYMA_13G085100, LOC100526976
  • Gene Family: bZIP Family
  • Description: bZIP Family protein
  • Species: Glycine max
  • Source: bZIP family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  NP_001236753.2  — transcription factor bZIP83
  • Refseq:  XP_006593384.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_006593385.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_006593387.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_006593388.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_006593389.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_006593390.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_014620649.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_014620650.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_014620651.1  — transcription factor bZIP83 isoform X1
  • Refseq:  XP_028195549.1  — transcription factor TGA7-like
  • Refseq:  XP_028195550.1  — transcription factor TGA7-like
  • Refseq:  XP_028195551.1  — transcription factor TGA7-like
  • Refseq:  XP_028195553.1  — transcription factor TGA7-like
  • Refseq:  XP_028195554.1  — transcription factor TGA7-like
  • Refseq:  XP_028195555.1  — transcription factor TGA7-like
  • Refseq:  XP_028195556.1  — transcription factor TGA7-like
  • Refseq:  XP_028195557.1  — transcription factor TGA7-like
  • Refseq:  XP_028195558.1  — transcription factor TGA7-like
  • Refseq:  XP_028195559.1  — transcription factor TGA7-like
  • Swissprot:  Q93ZE2  — TGA7_ARATH; Transcription factor TGA7
  • TrEMBL:  A0A0B2QWU7  — A0A0B2QWU7_GLYSO; Transcription factor TGA7
  • TrEMBL:  K7LX18  — K7LX18_SOYBN; Uncharacterized protein
  • STRING:  GLYMA13G02351.1  — (Glycine max)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0043565  — Molecular Function — sequence-specific DNA binding

Family Introduction:

  • The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
  • Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.

Literature:

Sequences:

CDS Sequence:
  • >Glyma.13G085100.3.p|Glycine_max|bZIP|Glyma.13G085100.3.p
    ATGAACTCTTCATCAACTCAACTAGTCCTCACGAAAAGGATGGGTATATATGACCCATTCCATCAAGTGAACATGTGGGGGGACAGCTTTAAAATTGATGGAAGCTTGAACTCAATTGCTCCCCAAATGTTAATGATTAAGCCTAGCATGCAGAACAAGTCTGAATGTACTCCTCACGAATCAAGGGAACCTTCTGGAGATGATCAAGAGACTAATGAAAAAGCTGATACTAAGGCACTAAGACGTCAAGCTCAAAATCGCGAGGCTGCTCGGAAATGTCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTGTGAAGCTCATGCAATTGGAGTTGGAGATTGAGAAAGCAAGAAAGCAGCAGGGTATGTACATACGTAGTGCACTAGATGTCAGCTATATGGGATCATCCGGAACAATTAACCCAGGGATAACTTTGTTTGAACTTGAATATGCACAATGGATTGAAGAGCAAGATAGACAGAATCAAGAACTGAGAAATACATTACAAACTCAAGCATCTGAAATGCAGCTTCATCTACTTGTTGAGAGTTGCTTGAGCCACTACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGGCTGATGTCTTCTATTTAATCTCTGGTGCATGGAAAGCATCAGTGGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCACAACTTCTAAATATCATTGCACCACAGCTTGAGCCTTTGACTGATCAACAAATTGTGAGCATTAACAACCTCCGGCTTTCATCTCAGCAAGCTGAAGATGCTCTTTCACTAGGATTGGACAAACTCCAGCAGAGTCTGGTCCACAACATACCATCAGATCCATTGGCTGTAGGACACTACGGGTTTGAGATAGCTGCTGCCATGGAAAAAGGTGAAGCACTAGAACGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACTCTGATTCACATGTCTCGGATCCTGACAACTGCTCAAGCTGCTAAAGGCTTGCTGGCTATGGGAGAATACTTTCATCGTCTTCGCACCCTTAGTTCTTTATGGACTGCTCGTTCATGTGATCCTTCCTTTCCCACTCAACTCTCAAACTGA
Protein Sequence:
  • >Glyma.13G085100.3.p|Glycine_max|bZIP|Glyma.13G085100.3.p
    MNSSSTQLVLTKRMGIYDPFHQVNMWGDSFKIDGSLNSIAPQMLMIKPSMQNKSECTPHESREPSGDDQETNEKADTKALRRQAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKARKQQGMYIRSALDVSYMGSSGTINPGITLFELEYAQWIEEQDRQNQELRNTLQTQASEMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGAWKASVERLFLWIGGSRPSQLLNIIAPQLEPLTDQQIVSINNLRLSSQQAEDALSLGLDKLQQSLVHNIPSDPLAVGHYGFEIAAAMEKGEALERFVNQADHLRQQTLIHMSRILTTAQAAKGLLAMGEYFHRLRTLSSLWTARSCDPSFPTQLSN*