Information report for Gh_A13G0355
Gene Details
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Functional Annotation
- Refseq: XP_017644690.1 — PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
- Refseq: XP_017644691.1 — PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
- Refseq: XP_017644692.1 — PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
- Refseq: XP_017644693.1 — PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
- Swissprot: Q9M7Q3 — AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
- TrEMBL: A0A0B0NJ24 — A0A0B0NJ24_GOSAR; Abscisic acid-insensitive 5-like protein 4
- STRING: Gorai.013G044500.1 — (Gossypium raimondii)
- GO:0009414 — Biological Process — response to water deprivation
- GO:0009651 — Biological Process — response to salt stress
- GO:0009738 — Biological Process — abscisic acid-activated signaling pathway
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0000976 — Molecular Function — transcription regulatory region sequence-specific DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
Family Introduction
- The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
- Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.
Literature and News
Gene Resources
Homologs
- Fragaria vesca: mrna28250.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_29620_BGI-A2_v1.0, Cotton_A_10770_BGI-A2_v1.0, Cotton_A_00792_BGI-A2_v1.0
- Malus domestica: MDP0000248567, MdAREB2
- Prunus mume: XP_008236589.1
- Prunus persica: Prupe.8G126600.4.p
- Ricinus communis: 29801.m003176
Sequences
CDS Sequence:
- >Gh_A13G0355|Gossypium_hirsutum|bZIP|Gh_A13G0355
ATGGGGTCTAATCTGAATTTCAAGAGGTTTGGTGAAGCTCCAAGTATGGAAGGGAGTGGATCAAAGGCAGTGGGCAATTTCCCATTGGCTAGGCAGTCATCGATATACTCGTTGACCTTCGATGAGCTGCAGAACACATTCGGTGGACTCGGCAAGGACTTCGGATCTATGAACATGGATGAACTCTTGAGGAACATCTCAACTGCTGAAGAGACTCATGGTTTGATGACAGCTTCAGTTCCTGGAGGCGAAGGTGTTTCTGGTGGTAATTTGCAGAGGCAAGGTTCATTGACATTGCCAAGGACTCTGAGTCAGAAAACGGTTGAAGAAGTATGGAAAGACTTGTTTAAGGAAAATGATGGTGCTAAAAATGTAAGTAATGGTGGTGGTGGTGGTGGAGCTAATTTGCCACAGAGGCAACAGACATTGAGAGAGATGACTTTGGAGGAGTTCCTGGGGAGGGCAGGTGTTGTGAGGGAAGATATGCAACCGGTTGGTGTGCCGAATAACAATGGATTTTTTGATAACAACTCTGGTTTAGCCCTTCAGTTTCAACAGAGAAATGGAAACAATGGTTTTTTGAGTAACAATAACTCAGTTCTTAATCAGCCTCCAATCTTACCATTAGACGTGAGTGGAGCCAAATCATCACATTCACAGCAGAAACAACAGCCACTCTTTCCCAAGCAACAAACGGTTGCATTTGCTCCATCTATGCACTTGATAAACACTACACATTTTCCTAGTCCTGGAGCTCGGGGGTCGGTAGTTGAAACCAGTGACCTTTCAATGAATACTAATCTAGTTCAGTCTAGTGGCCTGCAGAGTGGTGGGATGGGAATAGTTGGTTTACCATCTCCTGCAAGCCATATATCTCCAGATGTGATTTCAAAGAATAGTGTAGATACAACTTTATCACCGGTTCCTTATGTGCTTGGCCGGGGAAGAAAACGCAGTGCAGCATTGGAGAAAGTAGTTGAGAGAAGGCAAAGGAGAATGATTAAGAACAGAGAGTCAGCTGCAAGATCACGAGCTCGCAAGCAGGCTTATACATTGGAACTTGAAGCTGAAGTTGCAAAACTTAAAGAAATGAATGAAGAATTGCTGAGGAAACAGGAAGAAGTGATGGAAATGCAGAAAAATCAGATGCTAGAAACACTTAATCCAGCATGGGGAGGTAAAAGACAATGCTTAAGAAGAACACTGACAGGCCCTTGGTAG
Protein Sequence:
- >Gh_A13G0355|Gossypium_hirsutum|bZIP|Gh_A13G0355
MGSNLNFKRFGEAPSMEGSGSKAVGNFPLARQSSIYSLTFDELQNTFGGLGKDFGSMNMDELLRNISTAEETHGLMTASVPGGEGVSGGNLQRQGSLTLPRTLSQKTVEEVWKDLFKENDGAKNVSNGGGGGGANLPQRQQTLREMTLEEFLGRAGVVREDMQPVGVPNNNGFFDNNSGLALQFQQRNGNNGFLSNNNSVLNQPPILPLDVSGAKSSHSQQKQQPLFPKQQTVAFAPSMHLINTTHFPSPGARGSVVETSDLSMNTNLVQSSGLQSGGMGIVGLPSPASHISPDVISKNSVDTTLSPVPYVLGRGRKRSAALEKVVERRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNEELLRKQEEVMEMQKNQMLETLNPAWGGKRQCLRRTLTGPW