Information report for EcC054692.40
Gene Details
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Functional Annotation
- Refseq: XP_010055972.1 — PREDICTED: transcription factor TGA2.3
- Refseq: XP_010055976.1 — PREDICTED: transcription factor TGA2.3
- Refseq: XP_010055985.1 — PREDICTED: transcription factor TGA2.3
- Refseq: XP_010055993.1 — PREDICTED: transcription factor TGA2.3
- Swissprot: O24160 — TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
- TrEMBL: A0A059DHK9 — A0A059DHK9_EUCGR; Uncharacterized protein
- STRING: XP_010055972.1 — (Eucalyptus grandis)
- GO:0005975 — Biological Process — carbohydrate metabolic process
- GO:0006265 — Biological Process — DNA topological change
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0006537 — Biological Process — glutamate biosynthetic process
- GO:0007010 — Biological Process — cytoskeleton organization
- GO:0015979 — Biological Process — photosynthesis
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0009522 — Cellular Component — photosystem I
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0003918 — Molecular Function — DNA topoisomerase type II (ATP-hydrolyzing) activity
- GO:0004419 — Molecular Function — hydroxymethylglutaryl-CoA lyase activity
- GO:0004553 — Molecular Function — hydrolase activity, hydrolyzing O-glycosyl compounds
- GO:0005524 — Molecular Function — ATP binding
- GO:0008017 — Molecular Function — microtubule binding
- GO:0015930 — Molecular Function — glutamate synthase activity
- GO:0016758 — Molecular Function — transferase activity, transferring hexosyl groups
- GO:0030246 — Molecular Function — carbohydrate binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
- Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >EcC054692.40|Eucalyptus_camaldulensis|bZIP|EcC054692.40
ATGATTCTTAGGGGATCAGAAGGAAACTCCATTCGTTCTTCTCGAATTACAGACTTTGGAACACTTGAGCAGTCTCTTGGATACCGCATAGAAGATGCAGTTGACCTCAGCAGAAATCCTGTCTTCAATCAGATGAAATCAAGTGCCCAGGCTCTTGGGGCTGATGTCCAATTTGGCTCTTTGAATAAGTCCCTTTCATCCTCAGACAGAAATCTTTCTGTGAATATTGTGGGGTCTCAGACTCTATCTATGCATAGAGAATCACAATCAAACTTAGTATCAATACCCGGTGCTCATCGTGAGAACTGGGGGGATTCCACAATGGCAGATTCCAGTCCAAGGACAGATACCTCAACCGACGACACAGGTGACAAGAATCACAGGTTCGAAGGGGGTCAATTGGGTGTTGCAGCAGCTTCTGATTCCAGTGACAGATCAAAAGAAAAAGCCACAGATCAAAAGACTTTACGCAGGCTTGCTCAAAACCGTGAAGCTGCCAGAAAGAGTAGATTAAGGAAAAAGGCATATGTCCAACAACTGGAGAGTAGCAGGCTGAAACTCACCCAACTAGAGCAAGAACTGCAGCGAGCCCGTCAGCAGGGCATTTTCATTTCAGGTAGTGGAGAACAATCCCACTCAATGAGCGGAAATGGTGCCCTGGCCTTTGATGTTGAATATGCACGTTGGCTTGAAGAGCACAACAAGGTTGTTAATGAGCTGAGAAATGCGGTCAATGCTCATGCTGGAGACACTGAGCTACGGACAATTGTTGACAATGTCGCCGCACACTTTGATGAAATCTTCAAGCTGAAAGGCACTGCAGCAAAAGCTGATGTTTTCCACATTTTGTCTGGAATGTGGAAAACTCCAGCAGAGCGATGCTTTATGTGGATTGGTGGGTTTCGCTCATCTGAAGTCCTTAAGCTTCTTGTAAATCAATTGGAGCCTTTGACCGAGCAACAATTGGTGGGAATTGGCAACTTACAGCAGTCGTCGCAACAGGCTGAAGATGCTCTGTCACAAGGGTTGGAGGCATTGCAACAATCTCTTGCAGAGACATTAGCCAACAGCACACCTGCGGCAGGACCTTCTGGGAATGTGGCAAACTATATGGGTCAAATGGCAATGGCTATGGGCAAACTTGGAACTCTTGAGGGTTTCCTTCGTCAGGCGGACAATTTGCGCCAACAAACTCTGCAGCAAATGCACCGAGTTCTAACAACGAGGCAATCTGCACGAGCTCTTCTCGCAATAAACGACTACTTTTCCCGTCTTCGAGCGCTCAGCTCTCTCTGGCTTGCCCGGCCTCGGGAGTGA
Protein Sequence:
- >EcC054692.40|Eucalyptus_camaldulensis|bZIP|EcC054692.40
MILRGSEGNSIRSSRITDFGTLEQSLGYRIEDAVDLSRNPVFNQMKSSAQALGADVQFGSLNKSLSSSDRNLSVNIVGSQTLSMHRESQSNLVSIPGAHRENWGDSTMADSSPRTDTSTDDTGDKNHRFEGGQLGVAAASDSSDRSKEKATDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISGSGEQSHSMSGNGALAFDVEYARWLEEHNKVVNELRNAVNAHAGDTELRTIVDNVAAHFDEIFKLKGTAAKADVFHILSGMWKTPAERCFMWIGGFRSSEVLKLLVNQLEPLTEQQLVGIGNLQQSSQQAEDALSQGLEALQQSLAETLANSTPAAGPSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRVLTTRQSARALLAINDYFSRLRALSSLWLARPRE