Information report for Dca57886.1
Gene Details
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Functional Annotation
- Refseq: XP_021716588.1 — ABSCISIC ACID-INSENSITIVE 5-like protein 5
- Swissprot: Q9M7Q4 — AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
- TrEMBL: N0DR69 — N0DR69_DIACA; ABA responsive element binding factor
- STRING: XP_010685236.1 — (Beta vulgaris)
- GO:0009414 — Biological Process — response to water deprivation
- GO:0009651 — Biological Process — response to salt stress
- GO:0009738 — Biological Process — abscisic acid-activated signaling pathway
- GO:0010255 — Biological Process — glucose mediated signaling pathway
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0000976 — Molecular Function — transcription regulatory region sequence-specific DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
Family Introduction
- The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
- Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Dca57886.1|Dianthus_caryophyllus|bZIP|Dca57886.1
ATGGCTAGCAATTTAAATTTCAACAATTTCGGGAGTGACCCGCCAGTGGATGGGAGTGGAAGACCACCTGGGTCAGGGAACTTCCCGTTAATACGACAGTCGTCCATATACTCGTTGACGTTTGATGAATTTCAAAACACGCTAGGCGGGTTAGGTAAGGATTTTGGGTCCATGAACATGGATGAATTGTTGAAAAACATTTGGAGTGCGGAGGAGACTCAGTCTATGGCGACAGCTGCATCGGCTGTGAATGCTGCAGCTGCTGCTGCTGCTTCAGCTAGTGCTCAGGAAGGGGGTGGGTATTTGCAGCGACAGGGGTCTCTAACGTTACCTAGGACGCTTAGTCAGAAGAGGGTTGATGAGGTTTGGAAGGATATAGCCAAAGATTTTGGCGGTGGAAAGGATGGTGGTGGCGGTGGTGGTGGATCTAATGTGCCTCAGAGACAACAGACTCTCGGAGAAATGACTTTGGAGGAGTTTCTTGTGAGAGCTGGTGTTGTTAGGGAGGATCCTCAACCTTTTGGAAAGCCGAACCTTGGTGGTTGTGGGATTTTTGGTGATTTACCTCGATCTAACGATGATGGTGAGTCGGGTTTTGGGATCAACTTTCAGCAGCCTGGTGGTCAAGGTGTTGATTTGCTTGGTAATCGTATGTTGGGGAATAACAACCAAATTAACATACAGGCTACCAATTTGCCTTTGAACGTTAATGGTGTACGGACTTCTCAGCAGCAGGCGACACAAACACAGCTGGGTCCTCAACCACTGCAACAACAAATACAACAGCAGCAACAACAGCAGCAGCAACAACAACAACAGCAACGACCGCAACCAATCTTTCCTAAGCAACCGGGTGTTTCTTATGGTAACGCTCAGCTAGGTAGCCCGCGAATTGGTGGCGGTGTTGTGGGATTAGGTGATCCAGGAATGAACAACAATATAATGCCGAACTCGGGTTTGCAAGGGGGAGGAGGCATGGGTATGATTGGGCTTGGAGGTGGAGCAGGTGGTGTTCCTGTGGGATCTCCTGCAACTTTGTCATCGAATGGCCTCGCAAAGAGCAATGGGGATACTTCATCTGTTTCACCACTTCCTTATGTGTTCAATGGAGGTTTTAGGGGTAGAAAATCAGGCAATTCCGTTGATAAAGTTGTTGAGAGACGACAAAGGCGTATGATAAAGAATAGAGAATCTGCTGCTAGGTCACGAGCACGTAAACAGGCTTACACTATGGAGCTGGAGCAGGAAATTGCAAAACTAAAGGAGGAGAATCAAGAATTGAGGAAAAAACAGGCTGAAATCGTGGAAATGCAGAAAAACCAGGTGCAGGAGATGATGAATGCACAATCTGGACCTCGGAAGCGACTGAGGAGGACACAAACTGGGATGTGGTGA
Protein Sequence:
- >Dca57886.1|Dianthus_caryophyllus|bZIP|Dca57886.1
MASNLNFNNFGSDPPVDGSGRPPGSGNFPLIRQSSIYSLTFDEFQNTLGGLGKDFGSMNMDELLKNIWSAEETQSMATAASAVNAAAAAAASASAQEGGGYLQRQGSLTLPRTLSQKRVDEVWKDIAKDFGGGKDGGGGGGGSNVPQRQQTLGEMTLEEFLVRAGVVREDPQPFGKPNLGGCGIFGDLPRSNDDGESGFGINFQQPGGQGVDLLGNRMLGNNNQINIQATNLPLNVNGVRTSQQQATQTQLGPQPLQQQIQQQQQQQQQQQQQQRPQPIFPKQPGVSYGNAQLGSPRIGGGVVGLGDPGMNNNIMPNSGLQGGGGMGMIGLGGGAGGVPVGSPATLSSNGLAKSNGDTSSVSPLPYVFNGGFRGRKSGNSVDKVVERRQRRMIKNRESAARSRARKQAYTMELEQEIAKLKEENQELRKKQAEIVEMQKNQVQEMMNAQSGPRKRLRRTQTGMW