Gene Details:

  • Gene ID: BGIOSGA008968-PA
  • Gene Name: OsI_08779
  • Gene Family: bZIP Family
  • Description: bZIP Family protein
  • Species: Oryza sativa subsp. indica
  • Source: bZIP family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_015624540.1  — basic leucine zipper 43
  • TrEMBL:  A0A0D3FA03  — A0A0D3FA03_9ORYZ; Uncharacterized protein
  • TrEMBL:  A0A0D9YXQ3  — A0A0D9YXQ3_9ORYZ; Uncharacterized protein
  • TrEMBL:  A0A0E0GCM5  — A0A0E0GCM5_ORYNI; Uncharacterized protein
  • TrEMBL:  A0A0E0NKF3  — A0A0E0NKF3_ORYRU; Uncharacterized protein
  • TrEMBL:  A2X966  — A2X966_ORYSI; Uncharacterized protein
  • TrEMBL:  A3AAZ0  — A3AAZ0_ORYSJ; Os02g0728001 protein
  • TrEMBL:  I1P3U7  — I1P3U7_ORYGL; Uncharacterized protein
  • STRING:  OGLUM02G31690.1  — (Oryza glumipatula)
  • STRING:  ORUFI02G32700.1  — (Oryza rufipogon)
  • STRING:  OS02T0728001-00  — (Oryza sativa)
  • STRING:  ONIVA02G34180.1  — (Oryza nivara)
  • STRING:  ORGLA02G0265300.1  — (Oryza glaberrima)
  • STRING:  OBART02G31030.1  — (Oryza barthii)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0042803  — Molecular Function — protein homodimerization activity
  • GO:0043565  — Molecular Function — sequence-specific DNA binding
  • GO:0046982  — Molecular Function — protein heterodimerization activity

Family Introduction:

  • The bZIP domain consists of two structural features located on a contiguous alpha-helix: first, a basic region of ~ 16 amino acid residues containing a nuclear localization signal followed by an invariant N-x7-R/K motif that contacts the DNA; and, second, a heptad repeat of leucines or other bulky hydrophobic amino acids positioned exactly nine amino acids towards the C-terminus, creating an amphipathic helix. To bind DNA, two subunits adhere via interactions between the hydrophobic sides of their helices, which creates a superimposing coiled-coil structure. The ability to form homo- and heterodimers is influenced by the electrostatic attraction and repulsion of polar residues flanking the hydrophobic interaction surface of the helices.
  • Plant bZIP proteins preferentially bind to DNA sequences with an ACGT core. Binding specificity is regulated by flanking nucleotides. Plant bZIPs preferentially bind to the A-box (TACGTA), C-box (GACGTC) and G-box (CACGTG), but there are also examples of nonpalindromic binding sites.

Literature:

Sequences:

CDS Sequence:
  • >BGIOSGA008968-PA|Oryza_sativa_subsp._indica|bZIP|BGIOSGA008968-PA
    ATGTACCCTGCTGAGATTGCTAGTTTTCCATACTTGTCACCTGCAAGTGCAGTTTCTTTCAAAACTCATTACCATGTAGATACAAATGACTTCCTCCTCCAGTATAACAGTCTTCTGGTGCCTCAAGCTACATCTTACCAACATGTGGCACACCTACCCCATGAAACCAACCTTCCAGTTGGAAATAAATCCAATTCAGATGAATCAGATGACTATCAACGCAGTCTTGCAGAAGAGCGCAGGAGGAGAAGGATGATATCCAACAGGGAATCTGCCCGACGATCACGGATGAGGAAGCAGAAACAGCTAAGTGAGCTCTGGGCACAGGTTGTCCACCTCCGCAGCACTAATCGTCAGCTCCTTGATCAGCTGAACCATGTCATCAGGGATTGCGATCGTGTTACCCACGAAAACTGCCAGCTGAGAGATGAACAAGCCAAACTGCAGAAGCAGCTTGAGAAGACCCCTGTAGAGAACACGGAGAGTACCTTCATGGGTCCTGACAATTGA
Protein Sequence:
  • >BGIOSGA008968-PA|Oryza_sativa_subsp._indica|bZIP|BGIOSGA008968-PA
    MYPAEIASFPYLSPASAVSFKTHYHVDTNDFLLQYNSLLVPQATSYQHVAHLPHETNLPVGNKSNSDESDDYQRSLAEERRRRRMISNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHVIRDCDRVTHENCQLRDEQAKLQKQLEKTPVENTESTFMGPDN