Information report for RrC2092_p1
Gene Details
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Functional Annotation
- Refseq: XP_018436598.1 — PREDICTED: beta-amylase 7 isoform X1
- Refseq: XP_018436599.1 — PREDICTED: beta-amylase 7 isoform X1
- Refseq: XP_018436600.1 — PREDICTED: beta-amylase 7 isoform X1
- Swissprot: O80831 — BAM7_ARATH; Beta-amylase 7
- TrEMBL: A0A0D3BQ77 — A0A0D3BQ77_BRAOL; Beta-amylase
- TrEMBL: A0A3P6C9D3 — A0A3P6C9D3_BRAOL; Beta-amylase
- STRING: Bo4g025050.1 — (Brassica oleracea)
- GO:0000272 — Biological Process — polysaccharide catabolic process
- GO:0048831 — Biological Process — regulation of shoot system development
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0016161 — Molecular Function — beta-amylase activity
Family Introduction
- Brassinosteroids (BRs) signal through a plasma membrane-localized receptor kinase to regulate plant growth and development. We showed previously that a novel protein, BES1(BRI1-EMS-SUPPRESSOR 1), accumulates in the nucleus in response to BRs, where it plays a role in BR-regulated gene expression; however, the mechanism by which BES1 regulates gene expression is unknown. In this study, we dissect BES1 subdomains and establish that BES1 is a transcription factor that binds to and activates BR target gene promoters both in vitro and in vivo.
- BES1 interacts with a basic helix-loop-helix protein, BIM1, to synergistically bind to E box (CANNTG) sequences present in many BR-induced promoters. Loss-of-function and gain-of-function mutants of BIM1 and its close family members display BR response phenotypes. Thus, BES1 defines a new class of plant-specific transcription factors that cooperate with transcription factors such as BIM1 to regulate BR-induced genes.
Literature and News
Sequences
CDS Sequence:
- >RrC2092_p1|Raphanus_raphanistrum|BES1|RrC2092_p1
ATGGTAACAGACATGCAGAAGCTGCTTGGAGCTAGTGAAGAGGACGATGAGGAAGAGATGGATGCGGATGTGAAGGAAGAAGATGACGGACACCGACGACAGAACAGAGGAGCAGCTTCAGGGAGTAGTAACGACGAGTTCATGTTTCAGCAGTCGTCGTCGATGCAAGATCAACAAGTGGACACTCCTGGAGGAAGTCGAAGAAGCAGGCCGGTCGAAGAGAAGGAGAGGACCAAGTTGAGAGAGAGGCATCGAAGAGCTATCACTGCGAGGATCCTTGGTGGGTTAAGAAGGCATGGGAACTATAATCTGAGGGTTAGAGCTGATATCAACGATGTTATTTCCGCTTTGGCTAGAGAAGCTGGGTGGGTTGTTCTTCCTGATGGAACTACTTTTCCATCTAAATCTCAGGGGACAAAGCCTGCGGTTGTTGCTGGTTCATCAGGTTCACACATGGCACCACAGCAATCTTCACCTCCTGCGCTTAGAGTAGTATCATCATCTGGGCTTAGAAGCCCAACAACGGAGCTCAACGCTTGCCGTATGAAAGGTGTTTTCGCACCTACTCCATCGCCATATGATCTACCACCAACTCAATGTTCAGAACTGGTTGGCAGTGTAAATAAGACTGATGGGCTTGTTGGTTGTTCAGTCGATGTTATCAACAATAAACAGATTCTCGAGATTCCTCCAAATATGACAGAACAAGATTTCTCTGGTACTCCTTATGTTCCGGTTTATGTGATGTTACCACTAGGTGTAATCAACATGAAGTGTGAATTGGCTGATAGAGACGGACTGCTAAAGCACTTACGGATATTGAAGTCAATCCAGGTAGATGGGGTTAAAGTGGATTGCTGGTGGGGAATAGCTGAGTGTCATTCACCTCAGGAGTATAATTGGAATGGTTATAGGCAGCTTTTTCAGATAGTCCGTGATCTTAATCTTAAGATACAGGTTCTGATGTGCTTTCATGAATGTGGGGGTAATGTTGGTGATGATGTTTGCATCCCACTTCCTCATTGGGTGGCAGAGATCGGGAGAACCAATCCTGATATATACTTCACTGATAGAGAGGGAAGACGAAACCCTGAGTGTCTTTCTTGGGGTATTGACAAGGAACGTGTTTTAAGAGGCCGAACTGCACTTGAGGTGTACTTTGATTACATGAGGAGTTTCCGTATAGAACTTGGCGAGTTTGTAGAGGAAGGAGTAATAACTGTGGTAGAAATTGGACTAGGCCCTTGTGGAGAGCTAAGGTATCCTTCTTGTCCCATAAAGCATGGGTGGCGATATCCTGGTGTTGGAGAGTTTCAGTGTTATGACAAGTATCTCCTGAAGAGCCTGAGAAGAGCAGCTGAATCAAGAGGGCACCCGTTTTGGGGCCGGGCCCCAGAAAACGCTGGCTCATACAATTCCCAACCGCAGGGAACCGGTTTCTTCTGTGATGGAGGTGACTATGATGGTCTCTACGGGAGATTCTTTCTCAAATGGTATTCACAGGTTTTGATAGATCACGCTGACAGAGTCCTCTCTCTCGCTAAACTCGTCTTCTTTGACAGTACCTGCATCGCCGCAAAGGTCCCAGACGTCCACTGGTGGTACAGAACAGCAAGCCATGCAGCTGAGCTAACCGCTGGGTTCTACAACCCGAGCAACAGAGATGGTTATGCTGAAATTGCGTCTACACTGAAGAAGCATGGTGCCACTTTGAGCTTTGTATCAGGAGAAGTCCAAGTTCTGAACCGTCCTGATGATTTCTCAGGAGCATTAGGAGAACCTGAGGCAGTTGCTTGGCAGGTGTTAAACGCTGCGTGGGACACAGATACGCCGATAGCTAGAGAGAACTCGCTCCCTTGTCATGATAGAGTTGGGTATAACAAAGTGTTAGAGAGTGTCAAGTTTCCGAACGATCCAGATAGAAGGCATTTGTCATCATTTGCCTACAGTAGGCTCGTCCCAGCTCTTTTGGAAGGACATAACCTTGTCGAGTTCGACCGGGTTTATAGAGAAGGCGCCCTCTCCTGGTTCGAACTAAGAAACAGAGTTGCATTGGAAAGTAGTGGAGAAAGAATGTCGAAGAAGAACAATTTAGCCAAGAGAAAGAAGCAACACGAGTACAATCTCCAAAAGGAGAAAGAAATACAGGATAAGAAGATCAAGAAGCTTCAGGCGAACAAGAACAAGATGAAAGTTGATGGAAGTGGTAAGAAGAAGAAAGGTGGATTCTCAGTTGGGAAGAAGAAGTTGAAGACTAAGTTGACTCCAGCTGCTAAAGCTAAAGCTGCTCAAGCTATGGAGCTAGACAATTGA
Protein Sequence:
- >RrC2092_p1|Raphanus_raphanistrum|BES1|RrC2092_p1
MVTDMQKLLGASEEDDEEEMDADVKEEDDGHRRQNRGAASGSSNDEFMFQQSSSMQDQQVDTPGGSRRSRPVEEKERTKLRERHRRAITARILGGLRRHGNYNLRVRADINDVISALAREAGWVVLPDGTTFPSKSQGTKPAVVAGSSGSHMAPQQSSPPALRVVSSSGLRSPTTELNACRMKGVFAPTPSPYDLPPTQCSELVGSVNKTDGLVGCSVDVINNKQILEIPPNMTEQDFSGTPYVPVYVMLPLGVINMKCELADRDGLLKHLRILKSIQVDGVKVDCWWGIAECHSPQEYNWNGYRQLFQIVRDLNLKIQVLMCFHECGGNVGDDVCIPLPHWVAEIGRTNPDIYFTDREGRRNPECLSWGIDKERVLRGRTALEVYFDYMRSFRIELGEFVEEGVITVVEIGLGPCGELRYPSCPIKHGWRYPGVGEFQCYDKYLLKSLRRAAESRGHPFWGRAPENAGSYNSQPQGTGFFCDGGDYDGLYGRFFLKWYSQVLIDHADRVLSLAKLVFFDSTCIAAKVPDVHWWYRTASHAAELTAGFYNPSNRDGYAEIASTLKKHGATLSFVSGEVQVLNRPDDFSGALGEPEAVAWQVLNAAWDTDTPIARENSLPCHDRVGYNKVLESVKFPNDPDRRHLSSFAYSRLVPALLEGHNLVEFDRVYREGALSWFELRNRVALESSGERMSKKNNLAKRKKQHEYNLQKEKEIQDKKIKKLQANKNKMKVDGSGKKKKGGFSVGKKKLKTKLTPAAKAKAAQAMELDN