Information report for PGSC0003DMP400041754
Gene Details
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Functional Annotation
- Refseq: XP_006361593.1 — PREDICTED: beta-amylase 8, partial
- Swissprot: Q9FH80 — BAM8_ARATH; Beta-amylase 8
- TrEMBL: M1C8E5 — M1C8E5_SOLTU; Beta-amylase
- STRING: PGSC0003DMT400062050 — (Solanum tuberosum)
- GO:0000272 — Biological Process — polysaccharide catabolic process
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0048831 — Biological Process — regulation of shoot system development
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0016161 — Molecular Function — beta-amylase activity
Family Introduction
- Brassinosteroids (BRs) signal through a plasma membrane-localized receptor kinase to regulate plant growth and development. We showed previously that a novel protein, BES1(BRI1-EMS-SUPPRESSOR 1), accumulates in the nucleus in response to BRs, where it plays a role in BR-regulated gene expression; however, the mechanism by which BES1 regulates gene expression is unknown. In this study, we dissect BES1 subdomains and establish that BES1 is a transcription factor that binds to and activates BR target gene promoters both in vitro and in vivo.
- BES1 interacts with a basic helix-loop-helix protein, BIM1, to synergistically bind to E box (CANNTG) sequences present in many BR-induced promoters. Loss-of-function and gain-of-function mutants of BIM1 and its close family members display BR response phenotypes. Thus, BES1 defines a new class of plant-specific transcription factors that cooperate with transcription factors such as BIM1 to regulate BR-induced genes.
Literature and News
Sequences
CDS Sequence:
- >PGSC0003DMP400041754|Solanum_tuberosum|BES1|PGSC0003DMP400041754
ATGATCCAAACCCGAATCACCCTCTTCAGCCCCAATCCCATCCCCAACCTCGCCGTCCCCGCGGCCAGCAGAAAAGAGAGAGAGAAGGAGAAGGAACGAACGAAGCTACGAGAACGTCACCGGCGAGCAATTACGAGCCGAATGCTTGCTGGACTTCGTCAGTACGGGAATTTTCCACTTCCTGTTCGTGCTGATATGAATGATGTCCTTGCTGCACTTGCTCGGCAAGCCGGTTGGACTGTTGAGCCTGATGGTACCACCTTTAGACAATCTCCTGCTCCTGCTCCGACTAATGCTTCAAATATGAATGATGATCCAAATTCAGCACTTTCAATTCTGAAACGCACGTGTCCTGCAGAAAAGAGGAATAATAATAATAATGTTCCATCAGTCGAGAAGAGTTACAGAGGAGTGAGAAATAGGCCATGGGGGAGATGGTCAGCGGAGATTCGCGACCGTATAGGGCGGTGCAGACACTGGCTGGGTACATTCGACACGCCGGAGGAGGCGGCGCGTGCGTACGACGCGGCGGCGAGGTGGTTGAGAGGAATTGCTGCTGTTGTTGGAGAACATGTTCTTTTCGGTTACAATAACAATGAAAACAAGAATGATGATCCAAATTCAGCAGTTTCAATTCTGAAACGCACGTGTCCTGCAGAAAAGAGGAATAATGTTCCATCAGTGGAGAAGAGTTACAGAGGAGTGAGAAATAGGCCATGGGGGAGATGGTCAGCGGAGATTCGCGACCGTATAGGGCGGTGCAGACACTGGTTGGGTACATTCGACACGCCGGAGGAGGCGGCGCGTGCGTACGACGCGGCGGCGAGGTGGTTGAGAGGTTCAAAAGCTCGAACAAATTTCCAAATTCCTCCGATTGTTCCTCTGCCTACTTCACCAACATCGACGTCATCATCTTCAAATTCGTCTCGTGAAATGAAAATGAAAATGAAAATGAAAAATGGTGGCGCTGTTGCTAATAATCAAAGAAAATGCTCAGTGGGGACTTATCAGGTGATGTCTGTTGAGAGCCCAGTTTCTGGCAGTTCCTTTAGAAATTGCTCAACTAGAGCATCTGTGGATGGTCAGCCATCAGTTCCAAGGATCAATGAGAGTTTATCGCCCGCATCTTTTGATTCTATTGTGGTCACAGAAAGTGATACGAAGGTTGATAAATTCACAAGTACCAGTCCAATGAATTCTACAGGATGTTTAGAGGCAGGCCAGCTCATGCAAGAACTTCACTGTGGGGAGCATGGAAGTAGTTTTGCAGAGACTCAATACGTCCCTGTTTTTGTTATGCTTTCTAGTGGTGTAATCAACAATTTCTGCCAGTTGATGGATCCTGATGGTGTTAAACAGGAGTTGCAACAGCTGAAGTCCTTAAAAATCGATGGTGTTGTGGTAAATTGCTGGTGGGGCATCGTTGAAAGTTGGGTACCTCAAAAATATGAGTGGTCTGGCTACAGAGAATTGTTCAAAATAATCCGTGATTTCAATATGAAACTGCAGGTTGTAATGGCATTTCATGAAAATGGAGGAAGTGATACCAGTGGCATGTTCATTTCCCTTCCTCAGTGGGTTCTGGAGATAGGCAAAGACAATCAGGATATATTCTTCACAGATCGTCAAGGAAGAAGGAACACTGAATGCCTATCCTGGGGCATCGACAAAGAGCGAGTATTAAGAGGTAGAACTGCCATCGAGGTTTACTTTGATTTGATGAGAAGCTTCCGCACTGAATTTGATGACTTGTTCACTGATGGTCTAATTTCTGCTGTTGAAATTGGACTTGGAGCTTCTGGGGAGCTAAAGTACCCTTCTTTTTCTGAAAGGATGGGATGGAGGTATCCTGGTATTGGTGAGTTTCAGTGCTATGATAAATATTCTCTGCAGAATCTTCGAAAAGCTGCAACATCAAGGGGACACTCTTTCTGGGCCAAGGGACCTGATAATGCTGGTTATTACAATTCTAAGCCACATGAAACTGGATTCTTCTGTGAGCGAGGTGATTATGATAGCTACTATGGGAGATTTTTCCTCCATTGGTATAGACAGGTCTTAATAGATCATGCTGATAACGTTCTCACCCTGGCAACTCTTGCATTTGAGGGGATACAAATTGTCGTGAAGATTCCAGCAATTTATTGGTGGTACAGAACGAGCAGCCATGCTGCAGAGCTCACAGCTGGATATTACAACCCAACGAACCAGGATGGCTATTCTCCAGTTTTTGAGGTTCTCAAAAAGCACTCTGTAACAATAAAGTTTGTAAGTTCAGGGCTTCAGGTTCCAGAAACTGATGACGCGTTGGCAGATCCAGAAGGCTTGAGTTGGCAGATCATGAATTCAGCATGGGATAAAGAGATTAATGTTGCTGGTAATAATGCATTTCCATGTTATGATAGAGAAGGATTTATGAGGCTGGTTGAGACTGCAAAGCCTAGAAATGATCCTGATCGTCACCGTTTCTCTTTTTTTGCATTTCAACAACCATCGCCTTTGGTTCAGAGTGCAATATGTTTCTCGGAACTGGACTACTTCATCAAATGCATGCATGGTATTGTTTTCTAG
Protein Sequence:
- >PGSC0003DMP400041754|Solanum_tuberosum|BES1|PGSC0003DMP400041754
MIQTRITLFSPNPIPNLAVPAASRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPVRADMNDVLAALARQAGWTVEPDGTTFRQSPAPAPTNASNMNDDPNSALSILKRTCPAEKRNNNNNVPSVEKSYRGVRNRPWGRWSAEIRDRIGRCRHWLGTFDTPEEAARAYDAAARWLRGIAAVVGEHVLFGYNNNENKNDDPNSAVSILKRTCPAEKRNNVPSVEKSYRGVRNRPWGRWSAEIRDRIGRCRHWLGTFDTPEEAARAYDAAARWLRGSKARTNFQIPPIVPLPTSPTSTSSSSNSSREMKMKMKMKNGGAVANNQRKCSVGTYQVMSVESPVSGSSFRNCSTRASVDGQPSVPRINESLSPASFDSIVVTESDTKVDKFTSTSPMNSTGCLEAGQLMQELHCGEHGSSFAETQYVPVFVMLSSGVINNFCQLMDPDGVKQELQQLKSLKIDGVVVNCWWGIVESWVPQKYEWSGYRELFKIIRDFNMKLQVVMAFHENGGSDTSGMFISLPQWVLEIGKDNQDIFFTDRQGRRNTECLSWGIDKERVLRGRTAIEVYFDLMRSFRTEFDDLFTDGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYSLQNLRKAATSRGHSFWAKGPDNAGYYNSKPHETGFFCERGDYDSYYGRFFLHWYRQVLIDHADNVLTLATLAFEGIQIVVKIPAIYWWYRTSSHAAELTAGYYNPTNQDGYSPVFEVLKKHSVTIKFVSSGLQVPETDDALADPEGLSWQIMNSAWDKEINVAGNNAFPCYDREGFMRLVETAKPRNDPDRHRFSFFAFQQPSPLVQSAICFSELDYFIKCMHGIVF*