Gene Details:

  • Gene ID: ORUFI09G21750.1
  • Gene Family: BES1 Family
  • Description: BES1 Family protein
  • Species: Oryza rufipogon
  • Source: BES1 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_015696458.1  — PREDICTED: LOW QUALITY PROTEIN: beta-amylase 2, chloroplastic-like
  • Swissprot:  O65258  — BAM2_ARATH; Beta-amylase 2, chloroplastic
  • TrEMBL:  A0A0E0QVA7  — A0A0E0QVA7_ORYRU; Beta-amylase
  • STRING:  ORUFI09G21750.1  — (Oryza rufipogon)

Gene Ontology:

  • GO:0000272  — Biological Process — polysaccharide catabolic process
  • GO:0009570  — Cellular Component — chloroplast stroma
  • GO:0016161  — Molecular Function — beta-amylase activity

Family Introduction:

  • Brassinosteroids (BRs) signal through a plasma membrane-localized receptor kinase to regulate plant growth and development. We showed previously that a novel protein, BES1(BRI1-EMS-SUPPRESSOR 1), accumulates in the nucleus in response to BRs, where it plays a role in BR-regulated gene expression; however, the mechanism by which BES1 regulates gene expression is unknown. In this study, we dissect BES1 subdomains and establish that BES1 is a transcription factor that binds to and activates BR target gene promoters both in vitro and in vivo.
  • BES1 interacts with a basic helix-loop-helix protein, BIM1, to synergistically bind to E box (CANNTG) sequences present in many BR-induced promoters. Loss-of-function and gain-of-function mutants of BIM1 and its close family members display BR response phenotypes. Thus, BES1 defines a new class of plant-specific transcription factors that cooperate with transcription factors such as BIM1 to regulate BR-induced genes.

Literature:

Sequences:

CDS Sequence:
  • >ORUFI09G21750.1|Oryza_rufipogon|BES1|ORUFI09G21750.1
    ATGCAGCAGCAGCAGCAGGCGATGGAGGAGGATGGGGTGAAGGAGGAAGAAGAGGAGTACTACTTGGAGGAGGAGGACGAGGGGGAGGAGGAGACTCGGCCCCCGCTTCAGCAGCAGCAGCAGGTGGGGTTGGGGCGGCGGGGGCGGGCGCGGGAGGAGAAGGAGCGGACGAAGCTGCGGGAGCGGCAGCGGCGGGCGATCACGGCGCGGATCCTGGCGGGGCTCCGGCGGCACGGCAACTACAACCTGCGAGTGCGCGCCGACATCAACGAGGTCATCGCGGCGCTCGCCCGCGAGGCCGGCTGGGTCGTCCTCCCCGACGGCACCACCTTCCCCTCCTCCTCCTCCTCCGTTTCCCAGCCGCCACCCACGCAGCAGCAGCTTCAGGTGCCCGATCTGCTGCCCCCGCGCCCACCGGAGCGCGACTTCGCCGGAACGCCATACGTCCCCGTCTATGTCATGCTCCCGCTTGGAGTGGTCAATGGTAATGGCGAGGTGGTCGACGCCGACGTCTTGGTGGGCCAGCTTCGGGTACTCAAGGCTGCCGGCGTCGATGGGGTCATGGTCGATTGCTGGTGGGGGAATGTCGAGGCCCACAGGCCGCAGGAGTACAATTGGACCGGTTACAAGCGACTCTTCCATATGATCAGGGAGCTCAAGCTCAAGCTGCAGGTGGTCATGTCATTCCATGAGTGTGGAGGCAATGTTGGAGATGATGTGTCTATTCCTCTCCCACATTGGGTAACAGAGATCGGAAGAAGCAATCCAGATATCTACTTCACCGACAGGGCTGGCAGGCGTAACACGGAGTGCCTTTCATGGGGCATTGATAAAGAAAGGGTTCTTCAAGGACGGACAGGGGTCGAGGTATACTTTGACTACATGAGAAGCTTCCGAGTAGAATTTGATGAATATTTTGAGGATGGTATCATTTCAGAAATTGAGATTGGGCTAGGGGCTTGTGGAGAGTTGAGGTATCCATCTTATCCAGCAAAACATGGGTGGAAATACCCTGGCATTGGAGAATTTCAGTGCTACGACAGATACTTACAGAAAAGTTTAAGAAGAGCTGCAGAAGCACGAGGACATACCATATGGGCAAGAGCGCCAGACAGTGCAGGCCATTATAATTCTGAGCCAAATCTGACTGGATTTTTCTCTGACGGAGGAGATTATGATAGCTACTATGGTCGTTTTTTCCTCAATTGGTATTCCCAGGTGTTGGTGGATCATGCTGACCGTGTATTGATGTTAGCCAGGTTGGCTTTTGAAGGTTCAGATATTGCTGTTAAGGTTTCAGGTGTACACTGGTGGTACAAAACTGCCAGTCATGCTGCTGAATTGACTGCTGGGTTTTATAACCCATGCAACCGTGATGGTTATGCCTCAATTGCTGCTGTCCTGAAAAAACATGGTGCAGCTTTGAACTTTACATGTGTTGAACTGCGCACTATGGATCAGCATGAGGTATTTCCTGAGGCCTTTGCAGATCCAGAGGGCCTTGTATGGCAGGTGCTAAATGCTGCATGGGATGCTGGCATACCAGTAGCTAGTGAGAATGCTCTGCCTTGCTACGATAGAGATGGCTTTAACAAAATTTTGGAGAATGCAAAGCCACTGAATGATCCAGATGGGAGGCATTTACTAGGATTCACGTACCTGAGGCTCACCAAAGTCCTCTTCGAGAGAGCTAATTTTTTGGAATTTGAGCGTTTCGTTAAGAGAATGCATGGTGAAGCAGTTCTCGATCTACAGGTATAA
Protein Sequence:
  • >ORUFI09G21750.1|Oryza_rufipogon|BES1|ORUFI09G21750.1
    MQQQQQAMEEDGVKEEEEEYYLEEEDEGEEETRPPLQQQQQVGLGRRGRAREEKERTKLRERQRRAITARILAGLRRHGNYNLRVRADINEVIAALAREAGWVVLPDGTTFPSSSSSVSQPPPTQQQLQVPDLLPPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLVGQLRVLKAAGVDGVMVDCWWGNVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECGGNVGDDVSIPLPHWVTEIGRSNPDIYFTDRAGRRNTECLSWGIDKERVLQGRTGVEVYFDYMRSFRVEFDEYFEDGIISEIEIGLGACGELRYPSYPAKHGWKYPGIGEFQCYDRYLQKSLRRAAEARGHTIWARAPDSAGHYNSEPNLTGFFSDGGDYDSYYGRFFLNWYSQVLVDHADRVLMLARLAFEGSDIAVKVSGVHWWYKTASHAAELTAGFYNPCNRDGYASIAAVLKKHGAALNFTCVELRTMDQHEVFPEAFADPEGLVWQVLNAAWDAGIPVASENALPCYDRDGFNKILENAKPLNDPDGRHLLGFTYLRLTKVLFERANFLEFERFVKRMHGEAVLDLQV