Gene Details:
- Gene ID: Cla001224
- Gene Family: BES1 Family
- Description: BES1 Family protein
- Species: Citrullus lanatus
- Source: BES1 family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_008458240.1 — PREDICTED: beta-amylase 7-like isoform X1
- Refseq: XP_008458241.1 — PREDICTED: beta-amylase 7-like isoform X1
- Refseq: XP_008458242.1 — PREDICTED: beta-amylase 7-like isoform X1
- Refseq: XP_008458243.1 — PREDICTED: beta-amylase 7-like isoform X1
- Refseq: XP_016902303.1 — PREDICTED: beta-amylase 7-like isoform X1
- Swissprot: O80831 — BAM7_ARATH; Beta-amylase 7
- TrEMBL: A0A1S4E252 — A0A1S4E252_CUCME; Beta-amylase
- STRING: XP_008458240.1 — (Cucumis melo)
Gene Ontology:
- GO:0000272 — Biological Process — polysaccharide catabolic process
- GO:0048831 — Biological Process — regulation of shoot system development
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0016161 — Molecular Function — beta-amylase activity
Family Introduction:
- Brassinosteroids (BRs) signal through a plasma membrane-localized receptor kinase to regulate plant growth and development. We showed previously that a novel protein, BES1(BRI1-EMS-SUPPRESSOR 1), accumulates in the nucleus in response to BRs, where it plays a role in BR-regulated gene expression; however, the mechanism by which BES1 regulates gene expression is unknown. In this study, we dissect BES1 subdomains and establish that BES1 is a transcription factor that binds to and activates BR target gene promoters both in vitro and in vivo.
- BES1 interacts with a basic helix-loop-helix protein, BIM1, to synergistically bind to E box (CANNTG) sequences present in many BR-induced promoters. Loss-of-function and gain-of-function mutants of BIM1 and its close family members display BR response phenotypes. Thus, BES1 defines a new class of plant-specific transcription factors that cooperate with transcription factors such as BIM1 to regulate BR-induced genes.
Literature:
- A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. DOI: 10.1016/j.cell.2004.11.044 ; PMID: 15680330
Sequences:
CDS Sequence:
- >Cla001224|Citrullus_lanatus|BES1|Cla001224
ATGGCAACGGATATGCAAAGATTGATAGGTACGAGTGAGGAAGATGATGATGAAGATGTGGAGATGGATGTGAAAGAGGAGGATGATGAAGAAGATGATGGGGTGAGGCGGGTTCGTAGTTCATTAATGGTTGGGGATGATGGAGGAATGGTGTCAAGTGGTAGCAACAATAACCGCTTTGAACAGCACCAGGTACAAGAACAAGTGGGCACCCCGGGGGGTGGCCGTAGGTGTAGACCATTAGAAGAGAAAGAGAGAACCAAGTTGAGAGAGCGGCATCGAAGGGCAATCACTGCTAGGATCTTGGCAGGTCTTCGGCGACATGGTAATTATAATCTTAGAGTTAGGGCAGATATCAACGATGTGATTGCAGCTCTAGCTACAGAAGCTGGCTGGGTAGTTCTTCCTGATGGAACCACGTTTCCTTCAAGATCTCAGGGCATCAAACCTGCCGGAGGAGGTTCTACTGCAGTAACTTCATCTTCTTCACATATGGCGTCTCAACAAACTCCATCAACTTCCATTAGGGGAGTCAGTTGTGGCTTTAGGAGCTTGCCAGAATACAATGCATGTCGAATGAAAGGTGTTTTCTTGCCTAATTCGCCACCATATGATGCATCCCCAAATGCTAGATGTCAAAGTTCATCCCTGGTCGGAGATGCTGGGGAACAGCCAGGTGGTCATCCACTTATCAGTAGTTCAGTTGATGCTGTAGATGGAATGCAGATTGTTGATGCAACGCCAAAATTAACTGAACGTGATTTTTCTGGGAGTGCTTACATTCCAGTTTATGTGATGCTGCCGTTGGGTGTCATTAATATGAAGTGTGAGCTAGTTGATCCAGATGGTTTGCTTAAGCAGCTAAGGCTGCTGAAATCGGTAAATGTTGATGGTGTCATGGTTGATTGTTGGTGGGGTATAGTTGAAGCTCATTCTCCACAGGAATATAATTGGAATGGCTACAGGAGACTTTTTCAGATGGTTCATGAGTTGAAGCTCAAGTTACAGGTTGTGCTGTCATTTCATGAATGTGGAGGCAATGTTGGTGATGATGTTTGTATTCCACTACCTCATTGGGTTGCTGAAATTGGTCGGAGTAATCCTGACATATTCTTTACTGATAGAGAGGGAAGACGCAATCCTGAATGTCTCTCATGGGGAGTTGATAAGGAGCGAGTGTTAAGAGGCCGGACAGGTCTTGAGGTTTATTTTGACTACATGAGAAGCTTTCGTGTTGAATTTAATGATTTCTTCGAAGATGGTGTCATCACAACAATTGAAATTGGTTTGGGACCATGTGGGGAGCTTAGATTTCCATCTTGTCCTGTTAAGCATGGCTGGAGATATCCTGGCATTGGTGAATTCCAGTGTTATGATCAGTATTTGTTGAAAAATTTGAGGAAAGCAGCCGAAGCAAGGGGACACTCCTTCTGGGCTAGGGGGCCAGATAATGCAGGTTCCTACAGCTCTAGGCCACATGAAACAGGTTTCTTTTGTGATGGAGGTGATTATGATGGCTACTACGGTAGGTTCTTCCTTAATTGGTACTCCAAAGTTTTAGTGGATCATGGTGATCGGGTACTTTATCTGGCAAAGTTGGCTTTTGAAGGAACCCGCATTGTTGCTAAGCTCTCAGGTATCCACTGGTGGTACAAGACAGCGAGTCATGCAGCTGAATTGACTGCTGGGTTCTATAACCCTTGTAATCGTGATGGTTATGCTGCAATTATGGCAATGCTGAAAAAGCATTCTGCTTCTTTGAACTTCACTACTGCTGAATTTCACATGTTACACCAGCGGGAAGATTTTGCAAATTCGTTGTCTGACCCCGAGGCAGTAGTCTGGCAAGTGACGAATGCTGCATGGGATGTCGGCGTAGAAGTTTTAAGTGAGAATCCTCTTCCTTTCCTCGACAGAGTAGGTTATAACAAGATATTGGATAACGCCAAGCCCCTGGCTGATCCGGATGGGAGATATTTGTCGTCCTTTATCTATCATAGGCTCGGTCCACTTCTCTTAGAAAGACAAAACTTGATGGAGTTTGAACGATTTGTCAAGAGAATGCACGGTAAAGCTCTCGGTCGCTACTTCTCTTCCTGA
Protein Sequence:
- >Cla001224|Citrullus_lanatus|BES1|Cla001224
MATDMQRLIGTSEEDDDEDVEMDVKEEDDEEDDGVRRVRSSLMVGDDGGMVSSGSNNNRFEQHQVQEQVGTPGGGRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALATEAGWVVLPDGTTFPSRSQGIKPAGGGSTAVTSSSSHMASQQTPSTSIRGVSCGFRSLPEYNACRMKGVFLPNSPPYDASPNARCQSSSLVGDAGEQPGGHPLISSSVDAVDGMQIVDATPKLTERDFSGSAYIPVYVMLPLGVINMKCELVDPDGLLKQLRLLKSVNVDGVMVDCWWGIVEAHSPQEYNWNGYRRLFQMVHELKLKLQVVLSFHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGVDKERVLRGRTGLEVYFDYMRSFRVEFNDFFEDGVITTIEIGLGPCGELRFPSCPVKHGWRYPGIGEFQCYDQYLLKNLRKAAEARGHSFWARGPDNAGSYSSRPHETGFFCDGGDYDGYYGRFFLNWYSKVLVDHGDRVLYLAKLAFEGTRIVAKLSGIHWWYKTASHAAELTAGFYNPCNRDGYAAIMAMLKKHSASLNFTTAEFHMLHQREDFANSLSDPEAVVWQVTNAAWDVGVEVLSENPLPFLDRVGYNKILDNAKPLADPDGRYLSSFIYHRLGPLLLERQNLMEFERFVKRMHGKALGRYFSS