Gene Details:

  • Gene ID: XP_009588506.1
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Nicotiana tomentosiformis
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_009588507.1  — PREDICTED: uncharacterized protein LOC104086059 isoform X2
  • Refseq:  XP_016511461.1  — PREDICTED: uncharacterized protein LOC107828625
  • TrEMBL:  A0A1S4DDH6  — A0A1S4DDH6_TOBAC; uncharacterized protein LOC107828625
  • STRING:  XP_009588506.1  — (Nicotiana tomentosiformis)

Gene Ontology:

  • GO:0015992  — Biological Process — proton transport
  • GO:0016020  — Cellular Component — membrane
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0004427  — Molecular Function — inorganic diphosphatase activity
  • GO:0009678  — Molecular Function — hydrogen-translocating pyrophosphatase activity

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >XP_009588506.1|Nicotiana_tomentosiformis|B3|XP_009588506.1
    ATGGCCTTTGCCAGAAAGTATTGGCAGAACGATAGCTTTTTAAAACTATGGCGAGGCAAGGGTTCCTGGTCAGTAAAATGCAAATTTGGACAGCAATATGCCTTTTTTACAAGTGGTTGGACGACTTTCGTGGAAGAAAATCACCTAAAAGTAGGTAATGTTTGTGCTTTCGAATATATTAAGAACCCCTCTTCTGTCAGATTAAAAGTCTCTCATTTCGGGGGAGAAGATATTTCGTCTCACAGGCCATTAACTAAAGTTTCGATGGCACCATTTTATGTGGGGTCCCCGCTCACGATGGACGGTAGCTATTTAAGACTACACGTTTTAGGCAAGGGATCCTGGAGAGTAAATGGGGTTGCACTTGTGTCTCTGGCCCTGTTTGGTGCTTTTGTGAGTCGGGCTGAAACTTCAACCGTCTATATTTTGACCCCCAAGGTCTTCACTGGTTTGATTGTTGGTGTCATGCTTCCCTACTGGATCTCTGCCATGACCATGAAAAGAGTTCTTTCTTTTTAA
Protein Sequence:
  • >XP_009588506.1|Nicotiana_tomentosiformis|B3|XP_009588506.1
    MAFARKYWQNDSFLKLWRGKGSWSVKCKFGQQYAFFTSGWTTFVEENHLKVGNVCAFEYIKNPSSVRLKVSHFGGEDISSHRPLTKVSMAPFYVGSPLTMDGSYLRLHVLGKGSWRVNGVALVSLALFGAFVSRAETSTVYILTPKVFTGLIVGVMLPYWISAMTMKRVLSF