Information report for WALNUT_00005755-RA
Gene Details
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Functional Annotation
- Refseq: XP_018828582.1 — PREDICTED: B3 domain-containing transcription repressor VAL1
- Swissprot: Q6Z3U3 — Y7797_ORYSJ; B3 domain-containing protein Os07g0679700
- TrEMBL: A0A2I4FAA7 — A0A2I4FAA7_JUGRE; B3 domain-containing transcription repressor VAL1
- STRING: XP_010108467.1 — (Morus notabilis)
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_46657
- Citrullus lanatus: Cla008097
- Glycine max: Glyma.11G197900.2.p
- Gossypium arboreum: Cotton_A_04150_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A03G0189
- Malus domestica: MDP0000127640
- Populus trichocarpa: Potri.013G157500.1, Potri.019G130300.1, Potri.013G157500.2, Potri.019G130300.2
- Pyrus bretschneideri: Pbr013136.1, Pbr017287.1
- Ricinus communis: 29976.m000497
- Ziziphus jujuba: XP_015874689.1
Sequences
CDS Sequence:
- >WALNUT_00005755-RA|Juglans_regia|B3|WALNUT_00005755-RA
ATGGAGTCCAAGATTTGCATGAATGCTTCGTGCGGAGCTACCTCCACGCACGAATGGAAGAGAGGCTGGCCTTTAGGATCCGGTGGATTCGCCGATCTATGTCACAACTGCGGATCTGCCTATGAGGATCTGGTTTTCTGTGATATGTTCCACTTAGAGGAAACTGGTTGGAGGGAATGCAGTTTATGCAACAAGCGAATCCACTGTGGTTGTATAATATCCGAGCGTTCGTATGAGTACCTTGATTTTGGGGGTGTCGGGTGTAATAGCTGTGTGAAAAGCTCTGGAATTTATCCGATCTGGAGGGGTGACCTTTCTAATGGATTTGGTTTATTAGCGGTAAATAATGCTGGCGATTCACTCTCCAGTCCTTTTGAGAAAAGATTGGTCAGTGACGATGAGGGAAGACTTATGCAGTTGTGCAAAATCATGGAAGCTGATGAACCAAACCTCTTGCCTCAATCTGAGAGAGGTGAAGTAAATGCATCTCAAGTTGACCTAGGCTTTTCGAATGTGACTCAGCCATCCATTGGATCAGACCCATTTACCAAACCAGACAATAGTAGACAAATATTGGAGGGCAAAGATATGCATGAGTCACTAGCTAAGCCATCTTTGAATATGACCTTGGGAACTCCAAATTTTGTGCTTCCCTTTTCTGGTGGAGTTGTAGATGGAAGGGAACAGAGCAAAACACCTTCTCCCATCCAAAAAGGGCAAAGATCTCGCCCAATACTGCCCAAACCCACAAAAACTAGCCTCACTGTAAGTTCAGAGACAAATAAAAGCGTGGCACAGATGCGAATCGCTAGGCCTCCTGCTGAAGGACGGGGAAAAAACCAGTTACTTCCCCGTTACTGGCCAAGAATTACTGACCAAGAGCTGGAGCAATTATCCGGAGATTTGAATTCCACTATTGTGCCATTGTTCGAGAAAGTGCTCAGTGCCAGTGATGCTGGTCGGATTGGTCGTTTGGTTCTCCCAAAAGCATGTGCTGAAGCGTATTTTCCTCCTATTTCTCAATCAGAAGGCCTGCCTTTAAGGATTCAAGATGTGAAGGGGAATGAGTGGACATTTCAGTTCAGATTCTGGCCCAATAACAACAGCAGGATGTATGTTTTAGAGGGTGTTACCCCTTGCATACAGTCTATGCAATTACGAGCGGGTGACACGGTAACATTTAGTCGGATTGATCCTGGAGGCAAACTTGTCATGGGGTTTCGAAAGGCATCCAACACTGCAGATTCACAGGATGCCCAGATGTCTGCCCTTCCTAATGGCACGCCTTCTAGGGAAACTTCCTTTGCTGGTGTTATTGAGAGTCTGCCTTCAGGAAGTGGCTACTCTGGGCTTTTTCAAACAATGAAAGGAAGCAAGGAACCTCACTTAAATGCTCTCTGTGAAAATTTGCATTTAGGGGAGGGAGATATCGGGTTGAATAAATGTGATAACCATGGAGACAGGATAAATGAAGATTCACCACAGCAACCAATGCACATTCGAGAGAAGAAGAGGACTCGAAATATTGGCTTTAAAAGTAAAAGGCTGTTAATGCATAGTGAAGAGGCTCTGGAGCTAAGACTTACATGGGAAGAAGCACAAGACTTGCTTCGTCCACCGTCATGTGTGAAGCCAAGCATTGTTACAATTGAGGACCATGAGTTTGAAGAATATGATGAACCACCGGTTTTTGGAAAGAGGACTATATTCACCGCCCTTCCTTCTAGGGGACCAGTGCAATGGGCTCAGTGTGACAATTGCTCCAAATGGCGAAGGTTGCCAGTGGATGTTCTTCTCCCTCCAAAGTGGACGTGTTCAGAAAATGTTTGGGATTCAAACAGGTGCTTCTGCTCTGTTCCAGAGGAGATCAGTCTGAAGCAATTAGCTAATCTTCTGAGAGTAAGGAAAGATTTCAAGAAGCGAAGAAGTGCAGAAAGCCATATGTCAGTCCAAGAACGTGAGCCAGCTTCTGGCTTGGATGCCTTGGCCTGTGCTGCAGTTCTGGGAGATAATGTGGGTGATTCGGGTGAACCCTCAGTTGGAGCCACCACCAAACATCCTCGACATCGCCCTGGCTGCACTTGTATTGTGTGCATCCAGCCCCCAAGTGGGAAGGGGAAGCACAAGCCCACATGTACTTGCAATGTGTGCATGACCGTAAAGCGCAGGTTTAAAACCCTAATGCTGCGCAAGAAGAAACGCCAATCAGAACTCGAAGCAGAGACTGGCCAGAAGGATGAAAACCACCTTAGAGATGAATCAAAAACGAATGGTCCATCAAGAGATGGACTGCTGCCTACGAATTTTCCCGGTAATGAAGAAAGCCACAGCAGAAATCAATTAGCTGAGTTGGCTGAGATCGGCAATGGACAAATAGACCTGAATTGTCATCCCAAACGTGAAGACATGCAACTGGATCTGGAGGTACCAGGAATGAGCCTGCAGAGCCTTGTTCAAGCGGCTAGCCTTCCATTGGAAGATTTTATGAAGCAAAGAAGGATTCCAACCTTGACATGTGAGCAACAGGGTAGTCTCGATTCCTGCATACACCCGCAATTAGTTACTGGAGAGAGTGAGAGACCCGGCCTCTCTGATGAAGGGCGCCCCTGCAGCTAA
Protein Sequence:
- >WALNUT_00005755-RA|Juglans_regia|B3|WALNUT_00005755-RA
MESKICMNASCGATSTHEWKRGWPLGSGGFADLCHNCGSAYEDLVFCDMFHLEETGWRECSLCNKRIHCGCIISERSYEYLDFGGVGCNSCVKSSGIYPIWRGDLSNGFGLLAVNNAGDSLSSPFEKRLVSDDEGRLMQLCKIMEADEPNLLPQSERGEVNASQVDLGFSNVTQPSIGSDPFTKPDNSRQILEGKDMHESLAKPSLNMTLGTPNFVLPFSGGVVDGREQSKTPSPIQKGQRSRPILPKPTKTSLTVSSETNKSVAQMRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVTFSRIDPGGKLVMGFRKASNTADSQDAQMSALPNGTPSRETSFAGVIESLPSGSGYSGLFQTMKGSKEPHLNALCENLHLGEGDIGLNKCDNHGDRINEDSPQQPMHIREKKRTRNIGFKSKRLLMHSEEALELRLTWEEAQDLLRPPSCVKPSIVTIEDHEFEEYDEPPVFGKRTIFTALPSRGPVQWAQCDNCSKWRRLPVDVLLPPKWTCSENVWDSNRCFCSVPEEISLKQLANLLRVRKDFKKRRSAESHMSVQEREPASGLDALACAAVLGDNVGDSGEPSVGATTKHPRHRPGCTCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMLRKKKRQSELEAETGQKDENHLRDESKTNGPSRDGLLPTNFPGNEESHSRNQLAELAEIGNGQIDLNCHPKREDMQLDLEVPGMSLQSLVQAASLPLEDFMKQRRIPTLTCEQQGSLDSCIHPQLVTGESERPGLSDEGRPCS