Information report for TRIUR3_34439-P1
Gene Details
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Functional Annotation
- Refseq: XP_020196102.1 — B3 domain-containing protein Os02g0598200-like
- Refseq: XP_020196103.1 — B3 domain-containing protein Os02g0598200-like
- TrEMBL: T1NUB8 — T1NUB8_TRIUA; Uncharacterized protein
- STRING: TRIUR3_34439-P1 — (Triticum urartu)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g47847.3.p, Bradi3g47847.1.p
- Hordeum vulgare: MLOC_18435.2, MLOC_18435.1, MLOC_18435.5, MLOC_18435.3
- Panicum virgatum: Pavir.1NG331600.2.p
- Triticum aestivum: Traes_6AL_78DDE990E.2, Traes_6AL_6FF2ED257.1
- Zea mays: GRMZM5G834874_P02
Sequences
CDS Sequence:
- >TRIUR3_34439-P1|Triticum_urartu|B3|TRIUR3_34439-P1
ATGCCCCAGTCCTTAACAGGTGAGGCCTCCACCTATTTCTCCCGACCTGGAAGAGCAGCCCTTCTTTTTCGCGGCGAGGGCGTGTGGAGAAGGGAGAGGATGAGTAGTGGCGAGCTGGCGCACCAGAACCGGCCCAGGAGCCGTGACACGGAGATGGAATGCGAGGAGGAGGAGGAGGATGAGACATGCAAAATGCTCAGCGAGGAGGAGGAGGAGGAGGTGGAGATGTGGGACAAGAAGGTGCAGAACCGGAAGGCATTCACTGGAAGCCTGGAGAAGGGGAGGAGAATGGAAGAGCCCATCGAACTGAGCGACGACGCCGATGACAATGAGACGATAATGGAAATGTCGAAGAAGGCGGGCAAACACAAGGAGAAGAAGAGGAGGCACAATGACGATGGTGACCATAAGAAGAAGAAGAAATCTGTGAGCAGCCATGGTGGTGACAAGAACACACATAGTGCCAATCGTGACAAGGATAAGAGGAGGGACATGCTGCTCTCGCCCAACAAGAACAAGGACCCTTTCCATTCCAAGGAGAAGAGCAGGACAATGCCGAGCAGCCACGGCGGTGATGGGAAGATGCATCCTGGTGATCACCACAATGATAACAAAAGCAGTACGATGTGGAGGTCTGAGTATGACAAGTACAAGGGGATTCCAAAAAAGGAAATGAAGAAGGATAAGAAACCGTGGCCCGTGCATAACGGTGGCAGCAGGGAGGAGGAGAAGAAGAAGACAGTGCTCGTTCTATCCAAGGAGGGCAAAATGCCTGTGCTAGACAACAGCAGCAACAAGGGAAACAAGTGGAAGAAGACGCCAATGTTGTATGATAAGGTGAAGAAGCCGCGGACCAGTGACAAGGATGACAAGGCAGGCAGTTATGACAGAAAGAAGACAACACCGGGCTATAACGCAGGGCACAAGGTGCAAAGCGGTCACGGAGAGAAGAAAAAAGTAAAATTTGCATTCTTCAAGGTTGCAGGCGAACATTTCGAGGAATTCCTGTTGATACCACCAAAGCCGGCAGGGGCATCCAAAATGGTGGGCTTGACTAATCAGCTTGTATGTCTTGAAGACTCCGAGGGGAAGTCTTCAATGGTCAGGCTATCAGTGGTAGATGGTTCCCTAGCTTTTTATCAGGGGTGGAGCAATTTTGTTTCAGACCATTCCATTAAGTGGGCTGAAATCATCCTGTTTGAGTACACTGGCTGCTCAAAGTTTTCTGTGCGGGTCTTCGGTGCGGATTCTTGGGAGAGAGTATCTTTCACTGTTGAAACGCGAGGTGAAGAGAAGAAACAGAAAGAGAGTTATGCACCTGATGATTTGGCCCCATGTCGGTGCTCTAGAGACATAGATGGTCATCACTATGTTTCTGGTGAATATACTAGGAGCAACAGGCCTAAAACAAAGTCTGATGGATATACGGATAACGCTGAGGTTTCTCCTGGTAATTTAGTTGCTAAATCTGCGAATGCAGTTCCAGGGACACGTCGTATGTCTGCCAATTCAATAGAAGATCCTAACGGAGTAGTAGGCGGGATCGTAGGTGGATCCTCAATGGCTCCAGATAACAAGGATGGACATTTGGCGAATGGGAAGCACACAGGAAATGCTATTTTTCCATCATATATAAAAGCTACTACAAGGAGCCCTGAAACAGTTGTAATTGCCGACGAAGCTCCTTTAGCACAAGAAAATAAGGACACAGTGGCTCTTGATAACAAGGAAGCAAATCTGACCATTGGAGAGTGCAAAACGAAGTGCAATGCTTCAATAACTTGCAACAATGAAAAAGCAACTAGGCTTGATTTAGTCCCAGTTACTATTGATGCAGCTCCATTGTCACAAGAAAATGGTGATGCAGTCGAGCTAATGACATTTGCTGGTCACATAGAAGATGCAGTCATGATGAAGGAATCTACTTCGGCAAAATGTGCAGAAATACACGGTTCAGACGAAGATTTAAGGAGGAAACAAGAAGGAAATACAGTTCGATTAGAATGCACTGCTGCTGCGGACAAATTTCCTAGCAATAACAAGATGGACACCAATGGAAATGCTTGCAGCAAATATGAATATCCAGGAGGTTCCCAGTGCTTGGGGAAATGGAAGGAGGCTACTGTGAGTGGTCGAGAGTCTCTTGATGGCACTGAACTGATTAGACCTGAAAAAAGACTGAAAACTGAGGAGAAATTGGTTGGTGCAATGGGAGTAAACCCTGTTGAACGCGGGTATGATGGCACTCACTCCTGTGTGCCTAGCCAAATATCAGAGTCTGGGCTTACTAGGACGAAGATTGAACATTCTGTCAATGGAAAAGGCGCTACTGGTAAACCTGAAACAAAAATAGAGCAAGTGGGACCCGTGGAAAGCATTGGATGCAGACAGGAAAGGAACAATATTTCCATGAGTGCCAACCGTGCAGTTGCACATCAGACAGAACATCATTTCTTCCGACAGGAGGATGCGAAGTCTAGCAATCCTGCGCCCCCGGTGCCTTTGCTGCCTGTCAAGGTTGAAGTTTCGGAGTTAGATGATCATCGTCCCGTATTGAAGGCCAGTTTACAGTTCGTCGTCCCTTCTACCACTCAGACAAGGCTTTTGTGTGTTGAGGTTTATCAGGAGTTACCCGATCCACTCTCCAATGCTGTTGGGCGCAAAGGGAGGCTGGACCGGAACATTGTAATGCTGAAGGATCCTATGAAGAGATTATGGCCGGTGTTCTACCATGAGACCTCCTTATTCGTGGGCTTCACCGGTGGCTGGAAATCTTTCGTCGCAGCAAACAAGCTTGAGGCGGGGGATCTCTGCGTGCTTCTGATGGACCTGGATGAAGATGAGCTAGTGTACGATGTTGAGATCACCAGGAAATGA
Protein Sequence:
- >TRIUR3_34439-P1|Triticum_urartu|B3|TRIUR3_34439-P1
MPQSLTGEASTYFSRPGRAALLFRGEGVWRRERMSSGELAHQNRPRSRDTEMECEEEEEDETCKMLSEEEEEEVEMWDKKVQNRKAFTGSLEKGRRMEEPIELSDDADDNETIMEMSKKAGKHKEKKRRHNDDGDHKKKKKSVSSHGGDKNTHSANRDKDKRRDMLLSPNKNKDPFHSKEKSRTMPSSHGGDGKMHPGDHHNDNKSSTMWRSEYDKYKGIPKKEMKKDKKPWPVHNGGSREEEKKKTVLVLSKEGKMPVLDNSSNKGNKWKKTPMLYDKVKKPRTSDKDDKAGSYDRKKTTPGYNAGHKVQSGHGEKKKVKFAFFKVAGEHFEEFLLIPPKPAGASKMVGLTNQLVCLEDSEGKSSMVRLSVVDGSLAFYQGWSNFVSDHSIKWAEIILFEYTGCSKFSVRVFGADSWERVSFTVETRGEEKKQKESYAPDDLAPCRCSRDIDGHHYVSGEYTRSNRPKTKSDGYTDNAEVSPGNLVAKSANAVPGTRRMSANSIEDPNGVVGGIVGGSSMAPDNKDGHLANGKHTGNAIFPSYIKATTRSPETVVIADEAPLAQENKDTVALDNKEANLTIGECKTKCNASITCNNEKATRLDLVPVTIDAAPLSQENGDAVELMTFAGHIEDAVMMKESTSAKCAEIHGSDEDLRRKQEGNTVRLECTAAADKFPSNNKMDTNGNACSKYEYPGGSQCLGKWKEATVSGRESLDGTELIRPEKRLKTEEKLVGAMGVNPVERGYDGTHSCVPSQISESGLTRTKIEHSVNGKGATGKPETKIEQVGPVESIGCRQERNNISMSANRAVAHQTEHHFFRQEDAKSSNPAPPVPLLPVKVEVSELDDHRPVLKASLQFVVPSTTQTRLLCVEVYQELPDPLSNAVGRKGRLDRNIVMLKDPMKRLWPVFYHETSLFVGFTGGWKSFVAANKLEAGDLCVLLMDLDEDELVYDVEITRK