Information report for TRIUR3_20767-P1
Gene Details
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Functional Annotation
- Refseq: XP_020151567.1 — uncharacterized protein LOC109736772
- TrEMBL: T1MS69 — T1MS69_TRIUA; Uncharacterized protein
- STRING: TRIUR3_20767-P1 — (Triticum urartu)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g14560.9.p, Bradi1g14560.10.p, Bradi1g14560.13.p, Bradi1g14560.12.p, Bradi1g14560.11.p, Bradi1g14560.5.p, Bradi1g14560.14.p
- Panicum virgatum: Pavir.9NG683700.1.p, Pavir.9KG100500.1.p
- Setaria italica: Seita.9G166700.1.p, Seita.9G167200.1.p, Seita.9G167000.1.p, Seita.9G166800.1.p
- Setaria viridis: Sevir.9G164600.3.p, Sevir.9G164600.2.p, Sevir.9G164600.1.p, Sevir.9G165200.2.p, Sevir.9G165200.1.p, Sevir.9G164900.1.p, Sevir.9G164700.1.p
- Triticum aestivum: Traes_5DS_675BEBC7B.2, Traes_5BS_4AD5BD777.2, Traes_5AS_B5962A71D.2
Sequences
CDS Sequence:
- >TRIUR3_20767-P1|Triticum_urartu|B3|TRIUR3_20767-P1
ATGACCAGGCTATCTATCAGGGGGTGTGAGACCAAGTATGTTTTCACCGCTTTTGGCCACCTGCCTTACCACCCAACAAGCTTGAAGCATGTCCCATATGTCTGGTCTTCCCGCATCCGGACAATATTCGACATGGGAGGTGTCCGCATTCGGGCTAGAGACCCGAGTGTATACTATCATGAGCTTCGGAGATCGCGATCCCTCCGTCCTTTCTTTGATGGTAGCGACGAGGTGGGGCCTGGTGTTAGGGCCAGATTCAGGCCTGAGTTGGTTCCCTTTACGCCCACTGAATCCGAGGTCAAGGCGCCGGGCTCAGCGGGTTCTTTGGAAGCAGGGCTTCGCCGAGGGCAGACGCCGGACTCTAGGCTCCGGTGGCTAGCTTCGCGATCGGCGGTGGGGTTTTCAACCGGGTTTAAACGTCCGGTGAGGTCGGCGCAGAAAGTGATGCTGCAGAACATAAAGATCTGGTCGGGGATGAAGATGTCCCTGGCTTGGGTGGGGTTTCCCATGAATGGCTCAACCATTGATCCTTTGGCGATCCACAACGGAACTCTCAATGAAAGCACCAATGTCGGTGTCAAAACCGGTGGATCTCGGGAAAAACGTTTTCGGAAAGGACACGAATACAAACCGGCTCACTGCGCCGCGCTACTGGACCGGCCCGCCTCGGGCGTAGGCGAGGCCTGTATTCACATGTACCAGACGCCGACATACCCAGGCGGAGCGGAGGGCGCCGTTCCGTCTAGTTTGATGGATACGCCTCTTACGGAGGAAAGAAGGGCGGCTAGGCGAGTTCCCCGGAGGGTTTGCTCCTCTGGCTCGCCAACTTCTTTGAACCATGGCGAGTCAGACGATGCACAAGAAATGAGCACAAATTCTACCGAGATATCAAGCAGTGATTGCTATACTCAGTTGTCAAGTGAAAGTTCAGACGAAGGATGCGAAAATAGAAGCTCAGGCCATCGCAGAAAACGGCGCAAGACATATGTGATATCCTCTGCATCCGAGCAATCAGGGCAAGACAGTCCTTCTGCATGCGAGTCTCTTGAGTCGGATGATGTTCAGATAACTCCAGGGAAAGATTATGTGTTACCGCAAAGGTGTGATCTATCTGACGCAGAAAAGAATAGAGTAGTTGTGCTTATCAAAGAAATCAAAGCTAAAGTTACTGTTTTTGTGGCTATCATGTTGAGGTCTTACTCTTCATATGTGACCATTCCTAAGGAATATGCTGCTGTGCACTTTCCACCTGAAAGTGCAACCATCACGCTTCGGAGTCCAGGCAAGAACAAGAAGTGGCATCCCAGATTCTACAAGAAAGGAACTATGATCAAGCTTACGGGCAGTTGGTTACACTTTGTGCGTGACAATGACGTGCATGAGGGAGATATCTGCATTTTTGTACCGGCAAAAGGTGGAAAACCATTCATGTTTACAGTCCATCTACTTCGCAAAGAAACAACTGATTCTCAAACTGAAGTTTCTCATGAATCTTCGGAGTGTGAGGACTCTCATGGTCAGCCGCCCTACATTTTACCATATGGAGCCCGTCTATCTCCCTCTCAGAGGAGTGCCGTTAAAAAGAAAGTGGACTCCATCCAATCTGAAGTTCCAATTTACGTGTCAATCATGACAAAGAGCAACCTTGGTTCCAGACACATGGTAGAATTGAGTAAACGATATGCCGCTGAACATCTCCCCCACAGAAATGTAACTTTGATGTTCCAGTACATGGGAAAGATATGGAATATCAATATGTTGTTTCATGATCGGAAGTACCCCAAAAGGTGGTACCTTATCGGAGGTTGGTCCAAATTTATCTCTGACAACAGTCTGCGATTAGGAGATATCTGTCTCTTTGAACTGAAAAAGGACGAGAAGGAGCTTACCGTGATAGTCCATCTACTTCGCAAAGAGAGTATTGATCACCCCTCTGGTGTAAGTCCTGTTCTGGACTCGAATTATGTGAGGGCAAGCACAATGATTGCCTCAACAGTGCGTGTTGGGGAGGAGCCAGATGACGAAGAAGAAACTGCCTCTTCAGGGCGTGAAGAACAAGGATTCGATGACGAGCCTATCGAGCATAACTATTCTGAGGGAGCCTCTAAGGCACACATGCCTACTGCTCCATGCTCAGAGAGTAACGTGTCTGGAATCAGCCTGTCACCGGAAGCTAGAGAGCAAGCTGCTGGTTGTTCAAACAAAAGTTTTGCAACAGAATTTCCAAATAAGCCTAGCTCCACTATGGAACACAACAGGATTATCCACACTGACAGAGCGGCAGCATCAGAAGTTATTGGTTTGTCAGACTACAGGATCCACAACAGTTGTGATAGTATTGATTCACAAGGAGGAGAGTCTCTTGCTGTTCAACAGCAATCGAGTCCTAGTCCTGGAATTGGCAATTCAGTTAATCTGATTACAGTTTATCTATCTCTCAGGGATTCTTCAAGTTGTGACCATAGAAGCGCTGAACATGTGGAGGGAGAGAGTGATGTTGCTTTACAGTCATCAGTAAGAGTTACAGGCCAGCAGGTAGGCGATGCTGAAAAGGAAGTTAATGCCAGCGGTGGAGAAAATACTCTTGCAGATCTACCTCATTTAGAGCCTCAAAATGTGGCAGCTGTGCCCACCCAGGCTGCATTGCCCATGCCTAAGGAAAAAACTGATACTCAGACAAATCGATCTGCCCAATCAGATGTAGCGCAAGCACAACCTCCACAAGGAGAGGTAGAGCAAGTAGGTCTGTCTGGTGTGGCAACGCCTCAGCCTTTACAACCTGAAATGCAAGCATCATTGTCTAGGGAAGTTGAAGCTCCGGCGAATGTTGTAATTCAGTCTGCTCAGCCTTTGGTGCTTGAAATGCAGCCATCAACCCCATTGTCAAATATTCCGCTCGAAAGAACACACCAAAATCGGGGTCAATCAAGTCGTCAACCAGAGGCCGCAGCTGGTTCTGCCCAGCCTGCACAACTCTTTCCGGCGCCGTCGATGATGTTTAATCACCCACCAATTGGTGATGAACCACTGAAAAATGAGCTGCACAGGTTACGGTTACACATTGACTCACTTGATAAAATCTATGAATTAAAGCAATCACAACTTCAGACAGAGTGCAGCCAAGAAATTGAGAAGATAAAACAAAAGTATGATTTGTTACTTGAGGAACGGGATTCTGTTCACCTTGAGCAAATGAAGACACTTGATGGTTTATTGGAGAAAGTTGTCTTCCACCAATCACTAGCTGCCGATTTCCGAGCCAAATTCATATCATCATCTGCAGCACAAGCAAAAGCCTATAGCCGTCCAATCCATCAGACACCTCAGGCTTCTCAGCAAGCACCCATGAGGCCGCCAGGTGTGACATCGACTTCGCCGCCAGCTGCGTGGTCATCAGCTGGTCGACCAGTAGTGCCGGGAGGTGCACAGCCATCACAGGTGGATCGACCATCAACACCAGCATCATCACAGGCGCCTCGTCCGCCATTGCCATTTCCACAAGTGGTCCGGCCTCCCATAAACCCTGGCAACCTTGTCAGAACAACAGGAGCTCCTACAAGTCACATGCCTCGAGGTCCACCACGTGGAGGCCATGGAGTTCCGAGCGCACCCGCTCCTCATCTTCAGCGCAGATTGCCGCCATGGGCGCATTCCACGTCCCCTGCAAATCAGAGGCAGCAGCAGCAGCATGCCACATCTGTAAGCTCGCAGTCTTCACATGCAGTCCCCCCTGTGAGCTCATCACCCTTGCCGCCGTCAAGGTCACAAGCAACTCACCATGGTTCGTCCACTCGGATGGATGTGGATGTGGTATGCCTGTCTGATGATGAGTGA
Protein Sequence:
- >TRIUR3_20767-P1|Triticum_urartu|B3|TRIUR3_20767-P1
MTRLSIRGCETKYVFTAFGHLPYHPTSLKHVPYVWSSRIRTIFDMGGVRIRARDPSVYYHELRRSRSLRPFFDGSDEVGPGVRARFRPELVPFTPTESEVKAPGSAGSLEAGLRRGQTPDSRLRWLASRSAVGFSTGFKRPVRSAQKVMLQNIKIWSGMKMSLAWVGFPMNGSTIDPLAIHNGTLNESTNVGVKTGGSREKRFRKGHEYKPAHCAALLDRPASGVGEACIHMYQTPTYPGGAEGAVPSSLMDTPLTEERRAARRVPRRVCSSGSPTSLNHGESDDAQEMSTNSTEISSSDCYTQLSSESSDEGCENRSSGHRRKRRKTYVISSASEQSGQDSPSACESLESDDVQITPGKDYVLPQRCDLSDAEKNRVVVLIKEIKAKVTVFVAIMLRSYSSYVTIPKEYAAVHFPPESATITLRSPGKNKKWHPRFYKKGTMIKLTGSWLHFVRDNDVHEGDICIFVPAKGGKPFMFTVHLLRKETTDSQTEVSHESSECEDSHGQPPYILPYGARLSPSQRSAVKKKVDSIQSEVPIYVSIMTKSNLGSRHMVELSKRYAAEHLPHRNVTLMFQYMGKIWNINMLFHDRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDEKELTVIVHLLRKESIDHPSGVSPVLDSNYVRASTMIASTVRVGEEPDDEEETASSGREEQGFDDEPIEHNYSEGASKAHMPTAPCSESNVSGISLSPEAREQAAGCSNKSFATEFPNKPSSTMEHNRIIHTDRAAASEVIGLSDYRIHNSCDSIDSQGGESLAVQQQSSPSPGIGNSVNLITVYLSLRDSSSCDHRSAEHVEGESDVALQSSVRVTGQQVGDAEKEVNASGGENTLADLPHLEPQNVAAVPTQAALPMPKEKTDTQTNRSAQSDVAQAQPPQGEVEQVGLSGVATPQPLQPEMQASLSREVEAPANVVIQSAQPLVLEMQPSTPLSNIPLERTHQNRGQSSRQPEAAAGSAQPAQLFPAPSMMFNHPPIGDEPLKNELHRLRLHIDSLDKIYELKQSQLQTECSQEIEKIKQKYDLLLEERDSVHLEQMKTLDGLLEKVVFHQSLAADFRAKFISSSAAQAKAYSRPIHQTPQASQQAPMRPPGVTSTSPPAAWSSAGRPVVPGGAQPSQVDRPSTPASSQAPRPPLPFPQVVRPPINPGNLVRTTGAPTSHMPRGPPRGGHGVPSAPAPHLQRRLPPWAHSTSPANQRQQQQHATSVSSQSSHAVPPVSSSPLPPSRSQATHHGSSTRMDVDVVCLSDDE