Information report for TRIUR3_16915-P1
Gene Details
|
|
Functional Annotation
- Refseq: XP_020174612.1 — putative B3 domain-containing protein Os08g0325100
- TrEMBL: T1MGQ8 — T1MGQ8_TRIUA; Uncharacterized protein
- STRING: TRIUR3_16915-P1 — (Triticum urartu)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g14510.3.p, Bradi1g14500.3.p
- Hordeum vulgare: MLOC_4129.3, MLOC_4129.2, MLOC_4129.1, MLOC_4129.4, MLOC_4129.5
- Triticum aestivum: Traes_4BS_5D04C29FF.2
Sequences
CDS Sequence:
- >TRIUR3_16915-P1|Triticum_urartu|B3|TRIUR3_16915-P1
ATGATGGTCGGATTGGGGGCTAGGGTAGTCCCGATCTCTCCAACTGCCGACAAGATGTGTTACGTGCTGCAAATCATGTATGCAGACTCCAATAATGTTGCCGAGTACGAAGCCCTCCTACACGGTCTTCGCATGGATCGGCGCGCGTCCCGAGGTTCCCGTCGGCCAGGATCTCAGGCTCGCCCGTCGCCTCGCTCAAGTGAGAAGATGGGGTGCGAAAGGTGCGAGCGGAGGGATGAACTCGATTACTGCAATTTGGATGACCGGGAGAAACACTTCTTGATGTTCATTGTCGATGACTGTGGTCAGGAGATGATCGTCCCAGATGAATTTCTGAGACGTTTCAGGGGTGAGATCCCAAGGGAGATCAGGCTACAAACACGAAATGGTCACAGTTACACCATTGGAGTTGCCAAGTATCCAGATAAACTAGTTCTTCAGGCGGGATGGGAAACATTCGTCAAAACCTATGATCTACATATGGACGACTGTGTGGTATTCAGATACAAAGGAAACTCTCAGTTTGATGTCATAGTTTTTGATCGATTTGGTCGCGAGAAAGCATTCTCTGTTATTAGAGACAGTGCTCCGCCTGTACAGGAAAGTCACAACAGCGGCACTGAAAATTTGGACCGTTCTCATGGTCATTCTCAGCCCATGGAAGTGCAATCGCCTATCGAAAATGCCAACCATCCTGAAGGGCGTCCTCAGCCCATGCGAATGCAACCACCTACTGAAAATGCAAACCCTTCTCATGCGCATCCTCAGCCCATGCGAATGCAACCACCTACTGAAAATTTGGATGATCCTGTTGGTTTTAGTCCACCTACTGAAAATGTGAACAATTTGTTTGGCCATAGTCAGCCTACGCAAATGCAACCATCTACTGAGGCTGTGCATCATTTTGCGCAAATGCAACCATCTAGCGAGGTCGTGGATCATTCTAATGGTCATGCTCAGACCATGCAAATGCAACTGTTTTGTAGACCTACCAAGCTGAGACAAACAATGCTTCAATGGGATTACTCGAGTATGGGCAACGAGACAGCGCCGAGTCCTTCAGATACTCCCAGAGATTCTTTGTCCTCAGAACATGATATTGAAGGTTGTGCTTCACCTAGATACACGCTCATATATAACACCAGTCTAAATACAGTGCAGAAGGAGGAAGTTGATGAGCAGACTTTCTCCAAGAAATATGTTCAGACACATGTGGGTGATAAGGAGCGAAGGATATGTCTTCAGCGATGTGGCAAGAGGTGGGATGTGCAATTTAGCAGTAGCGTTGAAGTCAAAAGGATTGTTAGTGGCTGGCGGAAGTTTGTGAAAGACAATGATGTAGAGACTGGTGATATCTGCATCTTTGAATTGTTGAAGATTGATGAGATGTGCACAATGGAAGTCCATATCATCCATGCAAAAGATTTTGATAGACCCTCCCAAATTGGTGGGAGGAGTGTCGATGGATGGTGTAAAGAAGCTACTACTAAAACTGTGGAACCTTCTCATTCTCGTCCTCAGCTCGTGAAAATGCAATTACGTAATGCAAGTGTAGAGGATTCTTATTCTCGTCCTCAGCCCATGGAAATGCAATCACCCTCAAAGGAAAGAAAGATACGAGTTGAAACGGTTAACTCGAGTCTGGGCAACGAGGGAGATTCTTCGATGTCAGAGGATAGTGTCACTTTGACTGGTTGCATCGGTGTGCATTTGAGGCGCATACCTTTAATTCAGAAGAAGGTGGTGAAGCAGAAGGTCGACCTTATTGGTTCTGAAATTCCCATCTGTGTGCTCGTGATGCAGAAGACCAATGTTACAGGAAGATTCGCTCTAAGCATCTCCAAGAAATATGTCCGCAGACACCTGGGGGACGAGGTGCGAAGCATCTGGCTGGAGCGAGACGGGGAGAGGTGCCAAGTGACGCTGGGACGCGGGCCTCAGAACAACAGGGTTGTGGGTGGATGGGTAAAGTTCGCCAAGGAGAACGGGCTGCGGACGGGCGATGTCTGCCTTCTCGAGCGGCTGAGGCACTGCAAGGAGTGCACAATGAAGGTCCACATCGTCCGCCGCGTAAAGCGTGCCGGTTGA
Protein Sequence:
- >TRIUR3_16915-P1|Triticum_urartu|B3|TRIUR3_16915-P1
MMVGLGARVVPISPTADKMCYVLQIMYADSNNVAEYEALLHGLRMDRRASRGSRRPGSQARPSPRSSEKMGCERCERRDELDYCNLDDREKHFLMFIVDDCGQEMIVPDEFLRRFRGEIPREIRLQTRNGHSYTIGVAKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQFDVIVFDRFGREKAFSVIRDSAPPVQESHNSGTENLDRSHGHSQPMEVQSPIENANHPEGRPQPMRMQPPTENANPSHAHPQPMRMQPPTENLDDPVGFSPPTENVNNLFGHSQPTQMQPSTEAVHHFAQMQPSSEVVDHSNGHAQTMQMQLFCRPTKLRQTMLQWDYSSMGNETAPSPSDTPRDSLSSEHDIEGCASPRYTLIYNTSLNTVQKEEVDEQTFSKKYVQTHVGDKERRICLQRCGKRWDVQFSSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIDEMCTMEVHIIHAKDFDRPSQIGGRSVDGWCKEATTKTVEPSHSRPQLVKMQLRNASVEDSYSRPQPMEMQSPSKERKIRVETVNSSLGNEGDSSMSEDSVTLTGCIGVHLRRIPLIQKKVVKQKVDLIGSEIPICVLVMQKTNVTGRFALSISKKYVRRHLGDEVRSIWLERDGERCQVTLGRGPQNNRVVGGWVKFAKENGLRTGDVCLLERLRHCKECTMKVHIVRRVKRAG