Information report for TRIUR3_14607-P1
Gene Details
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Functional Annotation
- TrEMBL: T1MAI9 — T1MAI9_TRIUA; Uncharacterized protein
- STRING: TRIUR3_14607-P1 — (Triticum urartu)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi4g02985.1.p, Bradi4g02996.2.p, Bradi4g02950.5.p, Bradi4g02950.4.p, Bradi4g02950.3.p
- Hordeum vulgare: MLOC_23884.1, MLOC_689.9
- Panicum virgatum: Pavir.3KG267100.2.p, Pavir.3KG267100.1.p, Pavir.3NG309700.1.p
- Setaria italica: Seita.3G372600.1.p, Seita.3G372300.1.p
- Setaria viridis: Sevir.3G389800.1.p, Sevir.3G389500.1.p, Sevir.3G389400.1.p
- Triticum aestivum: Traes_5AS_3D6AA43B5.1, Traes_5DS_BF6C4095F.2
- Zea mays: GRMZM2G065496_P04
Sequences
CDS Sequence:
- >TRIUR3_14607-P1|Triticum_urartu|B3|TRIUR3_14607-P1
CTGCAGACCATACCAGAGAAGTTTGTGCGCAGTGTCGGGGGAAAGATCTCTGAACTAGTCAAACTAGAAACTCCAGATGGTAATACATATAATGTTCATATTGCCAAGGAACTGAATAATCTAGTCCTTCGATCTGGATGGTCAAAATTTGCCAGAGTTTATGAGCTTCAAGAGGGTGACCTTTTGAGGTTCAAATACAATGGGGACTCCCACTTCAAAGTTGAGATCTATGATCCAAGTGCTTGCGAGAAAGAGACATCCTGCGTTGTAATGAACCACAATCCAGGTCTCCAAAAACGGAGCGTTCCTCGTGATAATCCAATGTTATCACCGGAGGGTGAAAGGTTAGCAAAGCGTCACAATGGTTGCTGCAGCGACAGTTGCAAAACTTCAAAGATGAATCCAGCAGGCACCCCACACAAACCAACTAAAAGGGAAGCCCCATCTTCTGAAGATGCCAGGAGTTCGGGTGAACTTCAGACTTCCACCAGGTCGCGCTATTTCTTAGCAACAGGGTGCAACCTGACTGATGCACATAAGGTGGAAGTCAACAAAATTGAGCAAAACATCAGGCCTGAGATTCCATTATATGTCAAAACCATTCATAGCAAGACATGGGGTGCTCATTACAGGATCAACGCTGATGATACATATCATCTTTCTACCGGCTGGTTGGGATTTGTCGATGACAACCAGTTGCAAAAAGGCGATACTTGCGTGTTTGAAGTATTAAAGAGGCAGAGAAGTTTCACAATGGCAGTTCATCTGCTTAAAGCAAGCTATCATCATCCACCAGGATTTCCCGCTTCTTCCAAGAGTCTTAGGCCTGAAGCCAAGAGTTTTAGGCCTGCAGATAAAGTGAGGTTGTCACGATTCACCACTCTGGAGGGTCTGCTGAAGACTAAAGTATATGAGAAAGTAGAAGCTATTAAGCCTGAAATCCCTGTTTTTGTGTCTATCATGATGAAAACCAATGTTAGCAGCAGAAGCCCCAATGAGATGATGGGTGAGAAAGGGTGCGAGAGCTGCAAGAAGTGGCAGGAGCACTACTACTGGGAGCACATGGATGTGAGCAAGACCAGGTTCTTCAAGCTCATGACACAAGATTCCCAGCAGCGCATTCGCATACCGGACAAGTTCGCGAGCAATTTCATCAGGCAGATGCAGAGCCCACAGGGTTTTGACCTGAAAGCACCAAGCGGCGAAACGTGGCATGTGGGTGTTAGCAAGGTTGGCAATGACCTGTTCTTCAGCTCAGGATGGGTAGATTTTGCCAAGGCTCATGAACTGCAGGAGAATGACCTCCTGGTCTTCACATTCAGTGGCAACTCTTTTGAGGTTCTGATCTTCGACGCGAGCGGCTGCGAGAAACTGTCTTCTCTCTTCGCTGGCGCTGGTATGCGCAAACATTTTGATGGGAAAGATCTTCTTCCTGGATCACCAAACTGTAGCAGCTCATGTGATGTTAAGCATGAGGAAACTGAGGAAGAGGAGAGTGATGATGACACATATGCTGACTTCGACTACTGCTACTCGAGGGTTGTGAAGCAACTACCCGACGACGAAAAACATGAAATAATCGGGCTGACTTCGCTGCAACGGGGCAATCCAGCGTTCATGACAGTTCTTCTGAGGGCCCACCTGCAACGCAAGGACAACTTTCTGGTCATCCCCAGTGAATTTGTACACGAACATCTTCACATGAGATCACATGAAGTGCTGCTGCTCAGGCCAAACAGAGAAGAGAGGTGGCATGTCAGCTACTACCAGGGGAGCTCCAGCAAAGGCTTCAGGGGCCAACCCTGGGTCAAGTTCATCCACGACAACAAACTGCACAAGGGGGATATCTGCGTCTTCGAGCTGATCAAAGGCGCGAGGAATGAGAACAAGAAGGCCGGGACGACGATGACCGTCCATGTTGTCAGGAGGAAGAAGTCCGACGGTCGG
Protein Sequence:
- >TRIUR3_14607-P1|Triticum_urartu|B3|TRIUR3_14607-P1
LQTIPEKFVRSVGGKISELVKLETPDGNTYNVHIAKELNNLVLRSGWSKFARVYELQEGDLLRFKYNGDSHFKVEIYDPSACEKETSCVVMNHNPGLQKRSVPRDNPMLSPEGERLAKRHNGCCSDSCKTSKMNPAGTPHKPTKREAPSSEDARSSGELQTSTRSRYFLATGCNLTDAHKVEVNKIEQNIRPEIPLYVKTIHSKTWGAHYRINADDTYHLSTGWLGFVDDNQLQKGDTCVFEVLKRQRSFTMAVHLLKASYHHPPGFPASSKSLRPEAKSFRPADKVRLSRFTTLEGLLKTKVYEKVEAIKPEIPVFVSIMMKTNVSSRSPNEMMGEKGCESCKKWQEHYYWEHMDVSKTRFFKLMTQDSQQRIRIPDKFASNFIRQMQSPQGFDLKAPSGETWHVGVSKVGNDLFFSSGWVDFAKAHELQENDLLVFTFSGNSFEVLIFDASGCEKLSSLFAGAGMRKHFDGKDLLPGSPNCSSSCDVKHEETEEEESDDDTYADFDYCYSRVVKQLPDDEKHEIIGLTSLQRGNPAFMTVLLRAHLQRKDNFLVIPSEFVHEHLHMRSHEVLLLRPNREERWHVSYYQGSSSKGFRGQPWVKFIHDNKLHKGDICVFELIKGARNENKKAGTTMTVHVVRRKKSDGR