Information report for TRAES3BF072800060CFD_t1
Gene Details
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Functional Annotation
- Refseq: XP_020198703.1 — B3 domain-containing protein Os03g0619600-like
- TrEMBL: A0A077RTE2 — A0A077RTE2_WHEAT; Uncharacterized protein
- STRING: EMT02000 — (Aegilops tauschii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g60554.2.p, Bradi2g60554.1.p, Bradi2g60554.9.p, Bradi2g60554.4.p, Bradi2g60554.3.p, Bradi2g60554.10.p, Bradi2g60554.7.p, Bradi2g60554.6.p, Bradi2g60554.12.p, Bradi2g60554.11.p, Bradi2g60554.13.p
- Hordeum vulgare: MLOC_54810.2, MLOC_54810.1
Sequences
CDS Sequence:
- >TRAES3BF072800060CFD_t1|Triticum_aestivum|B3|TRAES3BF072800060CFD_t1
ATGAAGAAGTCGAATGTAAAACGGCATGCTACTCTGATAATACATAAGGATTATGCGCTCGAGCACTTTCCATGTGAAGATACAACTGCCGTACTCCAGCTGCCTGGGAAGAACAAGGATTGGAAATGCACATTCCGCATCAGGCCATCTGGCACATCTGATGCAGGTCGGCGCAACCTCTTTTTGTACAACTTTGCCTGTGACAACCATATTAGAGAGGGTGATATCTGCCTCTTTCAACCAATGACAAATGTGAAGCAGAGAAGGTTCATAGTGACAGTCCATGTCCTTGACAAAGTGAATATTGATCACTCCCCTGGTAGAAGAACTGACATTGGCTCAAATCATGGAAGGAAAAGGGCCAAGATGGGCGCCGTTAAGGACAAACCACACACCGACGAGCATGAAGTCTCTGAGGATTCCGAGGGAGCTTTTGGGCGTCTCTTCATGCTGTCAGACAAAGCTTGTCCAACACCAGCACAGCGGAAGAAATTGTTAAAGAAAGTTAAGAAGATTAAGTTCAAACCACCCTTTTATGTTGCTATCATGAGCAAGAGCACTGTCTGTCAGCGTGGCAGCCAAAACAATCCCATGCTACGCTTTGGCTCGCAGTACGCAACCAGGTATCTTGTTGAGAAGTTTGCTGGTGGCCATCCTTGTGGAAAACGTAGAGGAGTCGAGTTGGTGCTTCTGCGGGAGGGCAAGAGTAGGTCATGGTGTACCAAGCTGCGGCATAGCTCGCGAGGCTCGAGGGTTCTCAAAGGATGGCCATCTTTCGCCCGCGACAACAAGCTGCGGGAGGGGGACCTCTGCCTCTTCAAGCTGCTGAAGAGCGAGGAGCTGCTGGACGTATCCAAGATGAGCAACCCTTGCGAATGCTGTGAGAGGAAGATAAGGTTCATCAGAAAAATAAATGGAAACTTTATGCATAGTTTGGTCTTACCAGACTGGTTTGTTAGTCAACTTGGGGGCAAAATCTGGAGAACCATCAAACTGCAAGCCCCTGATGGTATCATATATGATGTTGGAGTTAGTGAGAATATGAATAGAATTATCCTCAAGTTTGGGTGGGCAGCATTTCTTGATGCAAATGAAATCGAAGAAAACTATTCCTTGATGTTTCGGTACCTCGGTAATGCCCTCTTTGAGGTTACGATATTTGATTCCAATGGGAAGGAGAAAGCCTTGTGCAGTCGCTATGCTGATAATTCGAGCAGTTCTCAAGATGGCGTTACTCAGTCGTCAGCAGGGGAAGGTTCAGATTCAGGTGGAAGCCAGAAGGAAAGCTTGTACTGCTACAAAAAATCAGCAAAGATGCCTGCAGTATCTTATTCTTCTGAGGAATTCTCAGGGCGGTGCTATCTTACAGAAGCACAGAAGGCGAAAGTTCTTGCACTTGTAAAGAAAATTCGACCCGAAATCCCAGTGCTTGTTGTACAGATGAAGAAGAGCAACGTCGAGCAGAGTGGTACTCTGGTACTATGTAAAGATTACGCACGCAAGCACTTGCCATGCGAAGGAACAAATATCATACTCCAGCTGCCTCGAAAAAACAAGGGTTGGAAGTGCAAATTCCATATCAGGCCATCTGGAACGTCGGACGCTGGTCGCCGCAACCTTTCATTAGGGAACTTTGTCCCTGACAATCATATTAGAGAAGGCGATATCTGCCTCTTTGAACCAATGACAATTGTTAAGGAGAAAAGATTCACAATGACTGTCCATCTCCTTCACAAAGCGGGCATTGATCATTCCCCTAGTGCAAGAACTGGTGTTGGCTCAAATCATGGAAGGACAAGCACAAAGATGGCAGGTGCTATGGAGGAACCACCTACTGATGGTGAAGAGTATTCTTGGGAACATGAAGAGCATGGAGTCTCTGATGATTCTGAGGGAGGTTCCGAACCTCGCTTCATGCTGGCAGACAAAGCTTCCCTAACTCGAGCACAAGAGAAGAAAGTGTTGGAGAAAGTTGAGGAAATCGAGTCAGAAGTACCCTTGTATGTTGCTATCATGAGCAAGTCCAATGTCTATCGGGGTGGTGGCGGTAACACTCCCACCCTACACTTTGGCTACCAATACACAGGCAGATATCTTGTTCAGAAGTCTGCTTCTGGCCATCATCGTGGAAAGAGTAGCCAGGTCAGTTTGGTGCTTCATAGGGAGGGGAGGAGTGGATCATGGCCTACCAAGATGCAACACAGCATGCAACACACAACTCATGCGATGAGGATTCTCAAAGGATGGACGTTTTTCGCCCGCGACAACCGCCTGCGGGAGGGTGACCTCTGTCTCTTCAAGCTGATAACGAATAAGGAGCCTCTGACTATGGTGATCCACATCATTCGCCGCAAGGAATGTTAG
Protein Sequence:
- >TRAES3BF072800060CFD_t1|Triticum_aestivum|B3|TRAES3BF072800060CFD_t1
MKKSNVKRHATLIIHKDYALEHFPCEDTTAVLQLPGKNKDWKCTFRIRPSGTSDAGRRNLFLYNFACDNHIREGDICLFQPMTNVKQRRFIVTVHVLDKVNIDHSPGRRTDIGSNHGRKRAKMGAVKDKPHTDEHEVSEDSEGAFGRLFMLSDKACPTPAQRKKLLKKVKKIKFKPPFYVAIMSKSTVCQRGSQNNPMLRFGSQYATRYLVEKFAGGHPCGKRRGVELVLLREGKSRSWCTKLRHSSRGSRVLKGWPSFARDNKLREGDLCLFKLLKSEELLDVSKMSNPCECCERKIRFIRKINGNFMHSLVLPDWFVSQLGGKIWRTIKLQAPDGIIYDVGVSENMNRIILKFGWAAFLDANEIEENYSLMFRYLGNALFEVTIFDSNGKEKALCSRYADNSSSSQDGVTQSSAGEGSDSGGSQKESLYCYKKSAKMPAVSYSSEEFSGRCYLTEAQKAKVLALVKKIRPEIPVLVVQMKKSNVEQSGTLVLCKDYARKHLPCEGTNIILQLPRKNKGWKCKFHIRPSGTSDAGRRNLSLGNFVPDNHIREGDICLFEPMTIVKEKRFTMTVHLLHKAGIDHSPSARTGVGSNHGRTSTKMAGAMEEPPTDGEEYSWEHEEHGVSDDSEGGSEPRFMLADKASLTRAQEKKVLEKVEEIESEVPLYVAIMSKSNVYRGGGGNTPTLHFGYQYTGRYLVQKSASGHHRGKSSQVSLVLHREGRSGSWPTKMQHSMQHTTHAMRILKGWTFFARDNRLREGDLCLFKLITNKEPLTMVIHIIRRKEC