Information report for Tp7g29510
Gene Details
Functional Annotation
- Refseq: XP_010447536.1 — PREDICTED: B3 domain-containing protein REM17-like
- Refseq: XP_019089532.1 — PREDICTED: B3 domain-containing protein REM17-like
- TrEMBL: A0A3P6BE35 — A0A3P6BE35_BRAOL; Uncharacterized protein
- STRING: Bra010225.1-P — (Brassica rapa)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00021880001, GSBRNA2T00068700001, GSBRNA2T00099812001
- Brassica oleracea: XP_013623119.1, XP_013623120.1, XP_013624920.1, XP_013598970.1, XP_013598969.1
- Brassica rapa: XP_009103758.1, XP_009108912.1, XP_009108913.1, XP_009138031.1
- Raphanus raphanistrum: RrC6137_p2
Sequences
CDS Sequence:
- >Tp7g29510|Thellungiella_parvula|B3|Tp7g29510
ATGGCGAAACTTAGATCGGACGCTTCAGATAAAACTTGGGAAGTGAAAATAGACGGCCGGAGATTCACCAGAGGCTGGAAAGACTTCGTCACCGCATATGACCTTCGAATCGGCGACATCATTATTTTCAAACACGAAGGAGACATGGTGTTTAATGTCACTCCTTTCGGTCCTAGCTGTTGTGAGATTCAGTATGCACAATCTCACATTATCAAGGAAGAAGAGGTTGACAACCGTGATGATGACGACGATGACAATGAGAATCAGCACATGATTAGAAAAGTTTCGAGGAAGAAGAATCTAAAACCCAAAACAGAGCCAAAGTCTTCTTTATCATTCGACTACTGCTTTGTAGCAGAAGTCACTGCTTCAAATCTAAAATTGGACACACTTGATCTTCCAGTGGAAGCTGCAAGCTCGAATGTTCTGAACAAAAGATGTCACGAGATGATAGTTGTGAACAAAGAGGGAAAAGCATGGACTGTGAATTTGAGATTTATAGAATCAGGCGGAAGCTATTACATCAGAGGAGGCTGGAGAAGATTCTGCCTTGATAACAGACGCAAAGTAGGAGATTTAATCACGTTTAATCTGGTCGGAGACGGGAAAGCTACTCCAATGATGTGTATCTGTCCTGAAGAAAAGTGTTCAGAACTAATGAGCAAATACATGAGCAAAGAGAGAGGGACGAAGAAGATAAAGAGGCGTCCTAAATGGATAGCTTCATCATCTTCAAGGCGAAACCGATTTGTGGAAATCACTCTCACAAGTTACAATATGAAATACTCGAAACTTATTCTTCCGGTAGCATTCACGAATACGAATGGGATTAACAAGCACAAGGAGATAATCCTGATGGATAAACATGGTGTGAAGCGGTTGACGAATCTGGTGCAGGATGGACCAAACTATGGAAGAAGAGGATTGGGAAAAGGATGGAAAGTTTTCTGTGAAGCTAATGACGTATTGATGATTGGCCAGCCTTTTGTGTTGGAGTTGATCTGGGAAGATACAGTTCCTGTTCTCAAGTTCTGTTCCAAGTTTTCAATGATGTTAAATGTCAAATCGAAAAAAGTGTGTTGGACGAGATTTACGAAGTCACTGAACATTCCTGTAGCCTTCTTCTCAAAGCATGTTGAAGGAAGAAACGAGCACAAGATTGCGAAGTTGAGATCAGAAGCTTCAGATACGACTTGGGAAGTTGAAATCGATGGCCGGAGACTCACCGGCGGCTGGAAAGAATTCGTCACAGCTCATGATCTTCGTATAGGCGATGTCGTTGTTTTCAGACACGAAGGAGATTTGGTGTTTCATATCACTGCATTGGGACCTAGTTGCTGTGAGATTGAGTATACATTAGCTCACAAAATCGATGATGATAGTGATGTTCGTAAGGACACCATCGCTTCAGAAATCAGACCTATAAAGAAGAGAGCGAAGAAGAATCCAAGGAGAGAAGACTATTCTTCATCAGGCCAGTCTTGTTTTGTAGCAAATGTCTCACTCTCCAGCCTGCGCGACGATAAACTGTATATTCCAGTTAGTTTTGTGAGGTCAAACGGTTTGAGCAAAACATACTGTAAGATTGTTCTTCTTAACGAAATGGGAAGATCGTGGAACTTAAGTTTAAATCACGACAAAAGCGGGACTTATATCAGACACGGCTGGAGAAGATTCTGCAGTGCCAATGGGATTAATGGAGGTCGCTTTACATTCAAACTGGTCCGGAGATCGGGGACACCTGTATTCCGTTTGTACCAAGCAGAATACAGACATGAGGTCGATGTGCATTCTTATTTCGTGGGATCTCTCACGCCTTCAAGCATACGTAATGATACGCTGTATCTTCCAAGGAGGTTTGTGAATTCAAATGGTCTGAAGAAAGGATGTTGTGAGATGATTCTGAAGAATGGAAATGGTGGAACTTGGAATTTAGTTTTGAGACACAACAAGTCTAGCAACGCTACTGTTCTCTCAGGAGGCTGGAGAAGTTTCTGCCGAGCAAACGGGATTAAAGCTAGAGATCCCTTCAGGTTTAAACTAGTTGGAACCACAGGAAAGCCTGTTCTTCGTTTGTGCCTTGCAGAATCCAACCGTGACACTAGGCAAGTAGACTGTTCGGAAGGAAACCATGTAAATTCGCTGTCCACAAATCCTAGCAGCAGAGAAGAGAGTAGTGAAACCAATGAAAGTAAAGAGAAGAGCAGAGACGACATCAGTGTAAAGGAGGAAGATGAAGAGGAGAGCATCAAAGACAAAAAAAGCTCGAGGGAATGTTTGAATACAGAGAAATGGAAGTATTGCTCGAAACTGGGAGCTTCATCTTCACCAAGTCAGAACCGATTTGTGATATTAACTGTTACACCGTACTCTGTCAAAAGCAATAAAATGAGGCTTCCACTGCGTTTCACGCAGGTGAATGGCATCAACAAAGCAGGGAAGATAACTATGTTGGGTAAAGACGGAGTAAAGTGGATGGTGCATCTTACGAATGAAAATAGACGCGGAAGAATGAGATTAGGAAGAGACTGGAAAGGATTTTGTGAAGTTCACGGCGTAAAGATAGGAGAGTCCTTTGTGTTGGAACTCATTTGGGAGGAAGGCGCAAGTCCTGTGCTTAAGTTCTGCACCAAAGTAAATTGTGTCTGA
Protein Sequence:
- >Tp7g29510|Thellungiella_parvula|B3|Tp7g29510
MAKLRSDASDKTWEVKIDGRRFTRGWKDFVTAYDLRIGDIIIFKHEGDMVFNVTPFGPSCCEIQYAQSHIIKEEEVDNRDDDDDDNENQHMIRKVSRKKNLKPKTEPKSSLSFDYCFVAEVTASNLKLDTLDLPVEAASSNVLNKRCHEMIVVNKEGKAWTVNLRFIESGGSYYIRGGWRRFCLDNRRKVGDLITFNLVGDGKATPMMCICPEEKCSELMSKYMSKERGTKKIKRRPKWIASSSSRRNRFVEITLTSYNMKYSKLILPVAFTNTNGINKHKEIILMDKHGVKRLTNLVQDGPNYGRRGLGKGWKVFCEANDVLMIGQPFVLELIWEDTVPVLKFCSKFSMMLNVKSKKVCWTRFTKSLNIPVAFFSKHVEGRNEHKIAKLRSEASDTTWEVEIDGRRLTGGWKEFVTAHDLRIGDVVVFRHEGDLVFHITALGPSCCEIEYTLAHKIDDDSDVRKDTIASEIRPIKKRAKKNPRREDYSSSGQSCFVANVSLSSLRDDKLYIPVSFVRSNGLSKTYCKIVLLNEMGRSWNLSLNHDKSGTYIRHGWRRFCSANGINGGRFTFKLVRRSGTPVFRLYQAEYRHEVDVHSYFVGSLTPSSIRNDTLYLPRRFVNSNGLKKGCCEMILKNGNGGTWNLVLRHNKSSNATVLSGGWRSFCRANGIKARDPFRFKLVGTTGKPVLRLCLAESNRDTRQVDCSEGNHVNSLSTNPSSREESSETNESKEKSRDDISVKEEDEEESIKDKKSSRECLNTEKWKYCSKLGASSSPSQNRFVILTVTPYSVKSNKMRLPLRFTQVNGINKAGKITMLGKDGVKWMVHLTNENRRGRMRLGRDWKGFCEVHGVKIGESFVLELIWEEGASPVLKFCTKVNCV