Gene Details:

Protein Features:

Annotation Proteins:

  • Refseq:  XP_003589270.2  — uncharacterized protein LOC11411561 isoform X1
  • Refseq:  XP_024631135.1  — uncharacterized protein LOC11411561 isoform X1
  • Refseq:  XP_024631136.1  — uncharacterized protein LOC11411561 isoform X1
  • Refseq:  XP_024631137.1  — B3 domain-containing protein REM13 isoform X2
  • Refseq:  XP_024631138.1  — uncharacterized protein LOC11411561 isoform X3
  • Refseq:  XP_024636626.1  — B3 domain-containing protein REM16
  • TrEMBL:  A0A2K3MRE8  — A0A2K3MRE8_TRIPR; B3 domain-containing protein
  • STRING:  AES59531  — (Medicago truncatula)

Gene Ontology:

  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Tp57577_TGAC_v2_mRNA16269|Trifolium_pratense|B3|Tp57577_TGAC_v2_mRNA16269
    ATGACTTTTTGTTACAAAACTTCCAATTTTCATTCTTTCTCCCACAAAAGTGGGGAGAAAAAAAAGCATAGGAACTATTCTTCTCTCTTCTCAATTTCTCTTCTCCAGAACCCTGCACCGTCCCTGCTCTTCTCTTGCTACAACAAAAAGCTTGCACCTTTCAACCATTTCATTCCATTCTCTCACTTTACTGCTTCATTGCTTCAAATGGAAGTTGTTGGAGTTGGAAGAAGCAAATCATGGGAGGAAGACATTTATTGGACCCATTTCCAGTTCATCCATTTCACTCAATTTCTCCGAAATGATTTTGATCAACAACTTGCACTTCCCAAAACATTTTCAAACAATGTAAAGAAGAAGTTGACAGAAAATGTGACTCTTAGAGGTCCTAGTCGAGTTGTGTGGAAGGTAGGGCTGACTACTAGAGACGATGCCTTGTACTTCACGAACGGTTGGCAACAATTCGTGAAAGATCACTCTTTGAAAGAGAATGATTTCCTTGTCTTTAAATACAAGGGTGAATCACACTTTGAGATTTTAATCTTTGATGGAGAAAGTTTATGTGAGAAAACAGCTTCTTATTTTGTCGGAAAATGTAGACCTGCTCAAACTGAACAAGGGGGTAGCAAGGCAAAGGATACTGCTTCGAATGGTGGTGTAGAAACGCCATTAGTTGTACCTATTGGAACTAACAATGGAAAGACTTGTAATGCTGGTGTTGAATCTGCTTCCCCTGAGAAATTAACGGTTGATGCACTCACTAAGACCACAACTATACAGTTTCCGTTCCAACCAACCGGCAAAAGGGCCGAGAAACCTGTTAATGAAGTTACGCCTGTCCAGACTAAGAAGTGA
Protein Sequence:
  • >Tp57577_TGAC_v2_mRNA16269|Trifolium_pratense|B3|Tp57577_TGAC_v2_mRNA16269
    MTFCYKTSNFHSFSHKSGEKKKHRNYSSLFSISLLQNPAPSLLFSCYNKKLAPFNHFIPFSHFTASLLQMEVVGVGRSKSWEEDIYWTHFQFIHFTQFLRNDFDQQLALPKTFSNNVKKKLTENVTLRGPSRVVWKVGLTTRDDALYFTNGWQQFVKDHSLKENDFLVFKYKGESHFEILIFDGESLCEKTASYFVGKCRPAQTEQGGSKAKDTASNGGVETPLVVPIGTNNGKTCNAGVESASPEKLTVDALTKTTTIQFPFQPTGKRAEKPVNEVTPVQTKK*