Gene Details:

  • Gene ID: Thhalv10009500m
  • Gene Name: EUTSA_v10009500mg
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Eutrema salsugineum
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_024009099.1  — B3 domain-containing protein REM17 isoform X1
  • Swissprot:  Q84WP3  — REM17_ARATH; B3 domain-containing protein REM17
  • TrEMBL:  V4K9F8  — V4K9F8_EUTSA; Uncharacterized protein (Fragment)
  • STRING:  XP_006415947.1  — (Eutrema salsugineum)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0005634  — Cellular Component — nucleus
  • GO:0009507  — Cellular Component — chloroplast
  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Thhalv10009500m|Eutrema_salsugineum|B3|Thhalv10009500m
    ATGGCGGGTCAATCTCTTCACTCTCCGACCAAACCTCATTTTTTCCAGCCTCTTCTTCCCGGATTCCACTCTCATCTCAACATGCCTGTATCTTTCTTCTCGAAGCACGTGGAAGGAAGACACAACCAAAACAAGACTGCGAAACTGAGATCAGATGCGTCAGAAAAAACTTGGTCAGTGAAGATGGACGGTTTGAAATTCACCGACGGGTGGGAAGATTTTGCAGTCGCACATGATCTCAGAATTGGTGACATCATCATTTTCAGACATGAAGGAGATATGGTGTTTCATGTCACAGCTTTGGGACCAAGTTGCTGCGAGATTCAATATACATCATCAACATCTAACGAAACCGATGGTAATGGTGATGATCAGACCAACCATATTGGAAACAGAACAAGAGTGAAGAGAAAGAGAGTGAAGAAGAATCGAAGAAAGAAAGCAGAATCTTCTTCATCAGACCATTCTCATTTTGAGGCAAAAGTCTCAGCCTCGAGCCTAGAAATGGATCGACTGTATCTACCACGGATTTTTGCGAGGTCAAACGGTCTGGACAAAATGAGCGGTGAGAAGATCCTTCTTCTTAACGAAGAAGGAAGATCATGGAATTTGAACTTGAAATACAATGAAGCAGGCATGCATACTTTTATCAGACCTGGTTGGAGAAGATTCTGCGCTCAAAATGGAATGAAACAAGGTCACTATACATTCAAACTGGTCCAAAAATCTGGCCCACCTGTCATCCGTTTGTGCCGTGCATTACATCGAGCAAAAACAGATCAAGAATCTTCATTACACCATTCTTGTTATTATCTTCCGCAGGGTTTCACACGGCTGAATGGCATCAACAAGCCAGGGAAGATAACTCTGTTGGGTGAAGATGGAGTAAAAAAGGTTGTGGATCTTTTGCAGAACAAGAGAACCGGAACAATGCGAATTGGAAAAGGCTGGAGAGAATTCTGTGATGCTCATGGCGTAAAGATAGGAGAGTCCTTTGTGTTGGAACTCATTTGGGAGGAAAAAGCAAGTCCGGTGCTTAAGTTCTGCACCAAA
Protein Sequence:
  • >Thhalv10009500m|Eutrema_salsugineum|B3|Thhalv10009500m
    MAGQSLHSPTKPHFFQPLLPGFHSHLNMPVSFFSKHVEGRHNQNKTAKLRSDASEKTWSVKMDGLKFTDGWEDFAVAHDLRIGDIIIFRHEGDMVFHVTALGPSCCEIQYTSSTSNETDGNGDDQTNHIGNRTRVKRKRVKKNRRKKAESSSSDHSHFEAKVSASSLEMDRLYLPRIFARSNGLDKMSGEKILLLNEEGRSWNLNLKYNEAGMHTFIRPGWRRFCAQNGMKQGHYTFKLVQKSGPPVIRLCRALHRAKTDQESSLHHSCYYLPQGFTRLNGINKPGKITLLGEDGVKKVVDLLQNKRTGTMRIGKGWREFCDAHGVKIGESFVLELIWEEKASPVLKFCTK