Information report for Spipo7G0021500
Gene Details
|
|
Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn274221
- Capsicum annuum: CA03g25050, CA03g24740, CA03g16190
- Petunia inflata: Peinf101Scf02008g00027.1
- Prunus mume: XP_008239617.1
- Prunus persica: Prupe.5G157600.7.p, Prupe.5G157600.14.p, Prupe.5G157600.12.p, Prupe.5G157600.9.p, Prupe.5G157600.5.p, Prupe.5G157600.13.p, Prupe.5G157600.3.p, Prupe.5G157600.1.p, Prupe.5G157600.11.p, Prupe.5G157600.10.p
- Pyrus bretschneideri: Pbr023992.1
- Vitis vinifera: GSVIVT01007552001
- Ziziphus jujuba: XP_015882333.1
Sequences
CDS Sequence:
- >Spipo7G0021500|Spirodela_polyrhiza|B3|Spipo7G0021500
ATGAAGGCACAAAAAGTTTGCCTGATTGCTTTTAGATACTCCATAGATCACCTCGTGGAAGTTCATGATCTATCAGCGAGGATAAACATTGAAGGAAATACTGCGTGCAGCGAGCAGCATTTGGGTGTCCTGGCCCCGTCAGATACCGGCCTTAATGGTGGTTCTACTCTGCTCTGCATCCACCCCCGAGTGGCCTCCTTGAGGACGGTTTACACTACACTACCACCGAAATTCGCCCGTCTCTGGGGAAGCCTCCTTGATGAAACTGCCCATCTCAAGGACTCAGACGGCCGCCGTTGGGAGGTCAAGGTTTCAAAGGTGGATGGTCGCCTGGCCTTTGGGGAGGGATGGGACGTGTTTGTAGTGCAACACTCTATCATGGTTGGAGAGCTGTTGGTCTTCAAATATGCCGAAGTTTCAAGTTTTATTGTTCAGATATTTGGCAAGAGTGGTTGTGAACGATGGCATTTTTGCCAGAGAACACACGACGACAGGGATGAATCTGTTTTGCACTGTTCCAGTGGAAGGAAGAGATCAGCTTCCGAGTGGTTGGTGGGCCTGCACGGAAATGCCAAGAAGCCTGATAAATCTGGTGTGGATTATTGTGGAAAACCGGAAGATTCTGTCCGAGGAGGGACACCTAACAGAGTTGTTCCTACTGAAGAACTGGAGCACCAAACTGCTGCTGCAATCGAGCATAATGAGATGCCATGCATTCTCATCAGTGAAGATGAGAATTCAGAGGAGGAGAAATGGGGGGGCCCACATAAGTCGATCAGGCAGGAGATGGCAGCGAAAATCTCAAATTCTGAGTATTCTCAAAACAAAGGCGCCACCATAACGGATGAAGAAAAATCCTCTGATGGAAACCAACGCAGACAGTCTCGAGATTCATTTGGGCGGAAACATAAAGGAATCATGAACAAGGTTCCCGGTGCAAAAAATGCCACAGTGAGAAATTCCCTGAAAAACGGCCTTGGACCTCGCCCAGCAAGCGTTGGGAGTTGCAGAAACTTGATTATGGAATTGCCAATCTCTATATCAAGTAGTGGACCAGGGGCTCCTCCCAAGGATAGAGGATTGAATGCATCAGAGGATGACGACCTGAGAAAGACGACTGCTGTTAACAACGCCAGCGGATCTGAATGGATATCATCATTGGGGTGTAGCACAAGTGAGGAAGAAAATCAGTGTTGCTTTGACACCCATGTATATCAATTTCTCGTTGATGGTCAGGGAACTTGCCACATTGTTAAGAATTCAATCTTCGATCCTGGATCATGCGGTAACAGCACTGGTTTTACCAAAGATGATGCGGATGGCATCCAAAAAAGAAAGCTGTGCAGCTCATCCACAACCAAGGGAATCTCTTCTCCCCATGATACTGCTCCAGAGGAGCTCTCTGCATCTCCTACACTTTGTGGCAGAAGAGAAGAATATTCTCCTAAAACTGACCAGATAAATGGTGAGAACGATGCCCAGAATGCCCATTTGGAGGCCTTGGGGAGGAATGCTGAAGCCAGACCTGCAGGCGATAATGCTTCAGTGGTAAGAGATCGCCCAGAAGGCATCATCGATGTTGTTCCATTGCGGGAGGAAATGCTGGGTGGATCATCGTGTGAATATGGAGTAAAGGGGGATGCCATGGTAGAGGAAGATGAGAAGTTGAAGCACTCTCTTGAAGAAGCTATCTTGAAAGAGGTGAAGATCGAGATCTTGGCTGAGGATGAGCCTTTGGCAGCCAACCCACCTCCTTTCTGCTTCTCTCTGGTAGTGGATACCTTGACATTCCATGAGTTGCCTGACCCAATTCCATCGATCGTTGGAAGAAAAAAGCTCCAGAGGAGGGTGGTGCCGCTCCGCGATCCGGAAATGAGGGTCTGGCCGGTCGTCTACCTTGAGAGCTTCTGGTTTCAAGGGTTTCTTGGCGGTTGGAAGGCCTTCGTGGTGGGAAACGGTGTCCGAGAAGGAGACACCTGCCATTTTGAGATGGTTGGCTTCGAGATGCAGCCCATGCTACAGATTTCAGACACTGAGCTAGCTCTGTGGGTTATGCTGAATTGGGCTGAGGAGATCAAGGATGCTGGCCCAGTTTACTGA
Protein Sequence:
- >Spipo7G0021500|Spirodela_polyrhiza|B3|Spipo7G0021500
MKAQKVCLIAFRYSIDHLVEVHDLSARINIEGNTACSEQHLGVLAPSDTGLNGGSTLLCIHPRVASLRTVYTTLPPKFARLWGSLLDETAHLKDSDGRRWEVKVSKVDGRLAFGEGWDVFVVQHSIMVGELLVFKYAEVSSFIVQIFGKSGCERWHFCQRTHDDRDESVLHCSSGRKRSASEWLVGLHGNAKKPDKSGVDYCGKPEDSVRGGTPNRVVPTEELEHQTAAAIEHNEMPCILISEDENSEEEKWGGPHKSIRQEMAAKISNSEYSQNKGATITDEEKSSDGNQRRQSRDSFGRKHKGIMNKVPGAKNATVRNSLKNGLGPRPASVGSCRNLIMELPISISSSGPGAPPKDRGLNASEDDDLRKTTAVNNASGSEWISSLGCSTSEEENQCCFDTHVYQFLVDGQGTCHIVKNSIFDPGSCGNSTGFTKDDADGIQKRKLCSSSTTKGISSPHDTAPEELSASPTLCGRREEYSPKTDQINGENDAQNAHLEALGRNAEARPAGDNASVVRDRPEGIIDVVPLREEMLGGSSCEYGVKGDAMVEEDEKLKHSLEEAILKEVKIEILAEDEPLAANPPPFCFSLVVDTLTFHELPDPIPSIVGRKKLQRRVVPLRDPEMRVWPVVYLESFWFQGFLGGWKAFVVGNGVREGDTCHFEMVGFEMQPMLQISDTELALWVMLNWAEEIKDAGPVY*