Information report for Sphfalx0008s0078.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024380837.1 — B3 domain-containing protein Os07g0679700-like isoform X3
- TrEMBL: A0A2K1JVP0 — A0A2K1JVP0_PHYPA; Uncharacterized protein
- STRING: PP1S31_242V6.1 — (Physcomitrella patens)
- STRING: PP1S42_132V6.1 — (Physcomitrella patens)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0010030 — Biological Process — positive regulation of seed germination
- GO:2000034 — Biological Process — regulation of seed maturation
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.01G133000.2.p, Glyma.01G133000.1.p
- Gossypium hirsutum: Gh_D02G0047
- Prunus persica: Prupe.4G036100.1.p
Sequences
CDS Sequence:
- >Sphfalx0008s0078.1.p|Sphagnum_fallax|B3|Sphfalx0008s0078.1.p
ATGAGAGAAGAGGACGGATTGGAAGCTGCTGCAGTGGAAGTTCCTGCTGCCGCCGCTGCCGCTGCTGCTCGTCAAGTTTGTTGGAATACCAAGTGCGGTAGCAGTGGCTCTAGCAAATGGCGACCTGGATGGGTGTTGCGTGCGGGGAACACCGCGTATCTCTGCGATTCTTGTGGGTTGGCATATGAACAGTTTCGCTTCTGTGAGACATTTCATAGTGATGATGCAGGCTGGAGGACATGCAATTCTTGTAAAAAGCGTGTGCACTGTGGGTGCATAGCTTCAGTCTATGGGCTGGTTTTACTTGATAAAGGCGGTGTTGAGTGCAGTGGCTGTGCCCAACAAGATGATGTTGTTGCTTCTTCTTCCATGGTGGGCAAACATGGACAGCAACTCTTGGCAAAAGAAGCACACACACGTGGGAAAGGGGAAGATCCAACTGACAGACGACAGTGTGAGGGTTTAGCTTTGGCTGCTTGCCAGTCTGAGCCTGGACCATGGCAACCACCCTCTTCTGCTGCTTGTGCTGCACCTCTCACCAATGCTGCAGTGCATCCTGCACCTTGGGATTCCTCCCTCAAAGGTGAGCAGCTGAATGGGAGTCAAGCCTTTGGGACCAAATCCCAGGAGCAAGAGGTGGCCATTTCAGATTTGGAACCACATGTCCACAATTTGGACAGTTCCAAAGTGGGCTCAAGGGCACATAGTCCAAATGCAGCCAGGGAAGGGACTGATGGTAGAGGCATGGAGTCACCAGGTCATGTGGAGAGCTCCTCTCCCTCACCAAAGTCAGGCACAGAGATGCCTTCTACTGGTTTGATTGTTTCAGGAAGGTCCAGCCCAGCCAAAGAGGTCTCTGGAGAAGCAAGCCAGCAGCAGCAGGGTGGTTTGGAGACAGGACCAGCAGGGGAATTGGGAGATGGTAAGACCACAGGGTTTTATCGGCCACCACGGGTCCAACAGCTGTTACCTCGACCTGCTATCTCAGGTCCATCAGCGGAACCTGGCTTTGATCCACAAGCACCTCTTCGTGTTGCACGCCCACCAGGGGAGGGCAGAGGGCGAAATCAACTTCTTCCCCGCTACTGGCCTCGCATCACAGACCAGGAGCTCCAGCAGATCACATCTGGAGATACCAATACTGTGATCACTCCACTTTTTGAGAAGATGCTTAGTGCAAGTGATGCGGGCCGAATTGGTCGCCTTGTGCTTCCGAAAGCATGTGCTGAGGCATATTTCCCCCCCATACACCAGCCAGAGGGGTTACCATTGAAGATACAGGATGTTACAGGGAAGGAATGGGTATTCCAGTTCCGGTTTTGGCCCAACAACAATAGTCGCATGTATGTGCTGGAGGGTGTTACACCATGCATTCAATCCATGCGCCTTCAAGCAGGTGACACAGTTACGTTCAGCAGACTGGAAGCGGATGGGAAACTGGTGATGGGATACCGCAGAGCTCCTTCATCTTTGTCTTCTCAGGATGCTGGGGCAACAGGAGGCACTATGACCAGTAATGGCTTACCTGGTGCAAATTATGTGGCACCACAGATCGTAGATGGATGGGCTGGTAAGGGAGGAAGTGCAAAATTGAAAGACAGCACGCTTGCTTTGACTACACAGCTAGATCGAAAACGTGGACGTCCCCTGGGTTCCAAGAGTAAGCGACTGCGCTTTGACACTGATGACGCCTTGCTTCTGAAGAGCAGCTGGGAGGAGGCCCAAGAGCTGCTGCGCCCTCCTCCATTGGCCGTTCCCACCAAGATCACCATTGATGGTCACGAGTTTGAAGAATATTCGGAGCCTCCTGTTTTTGCCAAGAAAACCTTCTTGAGCATCACACCTTCTGGGGAACATGACCAATGGGCACAATGTGATGAGTGTGGCAACTGGCGACGCTTGCCTTTTGAAGCTGTTATACATTCACACTGGTCATGTAGTCAAAATACTTGGGACTTGAAAAGAGCTTCGTGCAGTGCACCTCAGGAAGTGAGCAATGAAAAGCTTGAAGTGATTCTAAGACAGGCATCTGGACAAGAGGGTGGGAAGCAGGGCAGTGCCTCAAGGACAATGCTGGTGGCTACGGTGGGGGGGGATCTAATCACCACAACAGCAGTAGGGTTAGATACTTTGGCACAGGTAGCAGCAACAAGTAGTCCAGTTTCACCAATGCGCACCACAAAGCACCCAAGGCATCGACCAGGCTGTAGCTGCATTGTTTGCATCCAACCCCCGAGTGGCAAGGGCCCAAAGCACAAAGCCACCTGTACATGTAATGTGTGTGTTACGGTGAAACGCCGCTTCAAAACCCTTATGCAGCGCCGAAAGAAACGACAATTTGAACGGGAGTCAGAACTAGCACGTAAGAAGCGTGGCTGGCCTCATGATGATGTCTCTGACTCTGCTTCCTTGCTTGATGCTGCTTCTCGTCCAGAAACATCAGGGGGTGCTGTTGGTGAAGAAAACCCTACTACTCCCTTGGTATACCAGAGTGATGTTGGTGTGGAGGAGGGTCCTGGTAAAGCAGCAATTGACCTTAATAGTCAGCCTGATCGTGGTGGTGAGCGTGTTAGCATGGTCAGGATGGTACAGGATGCTGGCAAGCCACTCTCTACCTACTTGCACCAACAACACCTCATGACCCTTTGTGGCCTCGATCCTCTCTCTGATAAAGTGAGTGAGGAACCCAGCAGCAGCCCAGATGAGGTTGCGTCACAAACTTCCAGCAGGGCACATGCCGACAGTGACGTACAGGTGCCTGCTGCCATGTCAGTGCAAGTGCAGCAACCACAAAGTCCATTTGTGGTTGATATTGCTGAGCCATCAGGCCACATGGAGCCATGGGACCCAAGAGCAGGTAAACCTGCTGAGCCTTCAGGAGATTCTGTTCATTCAAGCTCTTCAAAGCAAGACTATGGCATGTTGAATCAGCTGGCTGGTTCGAACACACCTGCTAAGAAGTATGCTGCAGGAGCTGGCCGGGGACGTCAGATCTGCAGTGGCTGCGGTGAACCTATTGGGTCTGCAGCTAAGGTCTGCAGGCGTTGTGGTACATCCACTGCATTTGGTAAGAAAAAGAGAGGTGTGCCACCATAA
Protein Sequence:
- >Sphfalx0008s0078.1.p|Sphagnum_fallax|B3|Sphfalx0008s0078.1.p
MREEDGLEAAAVEVPAAAAAAAARQVCWNTKCGSSGSSKWRPGWVLRAGNTAYLCDSCGLAYEQFRFCETFHSDDAGWRTCNSCKKRVHCGCIASVYGLVLLDKGGVECSGCAQQDDVVASSSMVGKHGQQLLAKEAHTRGKGEDPTDRRQCEGLALAACQSEPGPWQPPSSAACAAPLTNAAVHPAPWDSSLKGEQLNGSQAFGTKSQEQEVAISDLEPHVHNLDSSKVGSRAHSPNAAREGTDGRGMESPGHVESSSPSPKSGTEMPSTGLIVSGRSSPAKEVSGEASQQQQGGLETGPAGELGDGKTTGFYRPPRVQQLLPRPAISGPSAEPGFDPQAPLRVARPPGEGRGRNQLLPRYWPRITDQELQQITSGDTNTVITPLFEKMLSASDAGRIGRLVLPKACAEAYFPPIHQPEGLPLKIQDVTGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMRLQAGDTVTFSRLEADGKLVMGYRRAPSSLSSQDAGATGGTMTSNGLPGANYVAPQIVDGWAGKGGSAKLKDSTLALTTQLDRKRGRPLGSKSKRLRFDTDDALLLKSSWEEAQELLRPPPLAVPTKITIDGHEFEEYSEPPVFAKKTFLSITPSGEHDQWAQCDECGNWRRLPFEAVIHSHWSCSQNTWDLKRASCSAPQEVSNEKLEVILRQASGQEGGKQGSASRTMLVATVGGDLITTTAVGLDTLAQVAATSSPVSPMRTTKHPRHRPGCSCIVCIQPPSGKGPKHKATCTCNVCVTVKRRFKTLMQRRKKRQFERESELARKKRGWPHDDVSDSASLLDAASRPETSGGAVGEENPTTPLVYQSDVGVEEGPGKAAIDLNSQPDRGGERVSMVRMVQDAGKPLSTYLHQQHLMTLCGLDPLSDKVSEEPSSSPDEVASQTSSRAHADSDVQVPAAMSVQVQQPQSPFVVDIAEPSGHMEPWDPRAGKPAEPSGDSVHSSSSKQDYGMLNQLAGSNTPAKKYAAGAGRGRQICSGCGEPIGSAAKVCRRCGTSTAFGKKKRGVPP*