Information report for SMil_00010610-RA_Salv
Gene Details
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Functional Annotation
- Refseq: XP_011095138.1 — B3 domain-containing transcription repressor VAL2 isoform X1
- Refseq: XP_020553390.1 — B3 domain-containing transcription repressor VAL2 isoform X1
- Refseq: XP_020553391.1 — B3 domain-containing transcription repressor VAL2 isoform X1
- Swissprot: Q6Z3U3 — Y7797_ORYSJ; B3 domain-containing protein Os07g0679700
- TrEMBL: A0A4D8Z0Q2 — A0A4D8Z0Q2_SALSN; Uncharacterized protein
- STRING: Migut.J00040.1.p — (Erythranthe guttata)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Gossypium hirsutum: Gh_D02G0047
- Manihot esculenta: Manes.09G117700.1.p, Manes.09G117700.2.p
- Nicotiana tabacum: XP_016435545.1, XP_016433628.1
- Petunia inflata: Peinf101Scf00642g03015.1
- Populus trichocarpa: Potri.016G136500.2, Potri.016G136500.1
- Ricinus communis: 29915.m000469
- Sesamum indicum: XP_011095138.1
- Solanum lycopersicum: Solyc10g075030.1.1
- Ziziphus jujuba: XP_015897449.1, XP_015897448.1
Sequences
CDS Sequence:
- >SMil_00010610-RA_Salv|Salvia_miltiorrhiza|B3|SMil_00010610-RA_Salv
TTGTTTGTTGCGTCAACCAAGTCTTCGAGTAAAGCCGCAATATATAGACCAATCAAAACACAAATTGCTCGTGCGAAAAGAAATACTTTTTTAACTGAGAATTTGTGTTTGGAAATGGAGGGTGGAGTGTGCATGAATGGGATTTGCGGTTCATCCAGCTCGGTGGAATGGAAAAAGGGTTGGCCCTTGCGATCCGGTGGCTTTGCTACTCTCTGTCATAATTGCGGGACTGCATATAAAGATTTGGTCTTCTGCGAAACGTTCCATTCAGAGGAAACAGGTTGGAGGGAGTGCACTTCGTGTGGGAAGCGTCTTCATTGTGGATGCATTGCTTCCAGTACATTGCTGGAGCTACTCGACACTGGTGGGGTGAATTGTACGGGCTGCAGCAAGAGCTGTCCGCGTCCTTATACCCCCTTAGAAGAAAAACATAAAGCATGTGGGCTTTCAACGGAAAACGGCACTGATAGAAATTCCGAAAGGATTGTACCTGCACAATCTGGTGATGATGCTAAAATGGACTGCCAAGAAAACTTGCTACCGTCCCCGAATGCCAATGTGACTTCAAGGAAACTCGAGGATGAGCTTGCCAGTCCTGAAGGAATAGGTTATAAATTGTTGTCGAGTTCTAATCAGTCGCCTGTTGGGCCATCAAAAAATTATGACATGTTCCAAGAAAGTAAAAGCCTACATAAGTCGTTAGTTGAGACTAACCTGAGCATCAGCTTGTCCGCTTCGTCAAACTCAAATACCTTATCCGGGGTGATGGCTGAAGAAAGGCAATTGAACACTGCAATTTCTTCCTTCCAACAGGGTTGCAGGCCCCGCCATCTCTTACCGAGGGTACCGACCATTTTGGCTGCAGGGTTAGAAACAAACTCTAGCTCTATTTCACAATTACGTGTCGCAAGGCCACCTGTAGAAGGAAGAGTTAAAAGCCAATTGCTTCCACGGTATTGGCCTCGAATAACAGACCAGGAGCTGCAGCAAATTTCTGGAGACTCGAATTCTACGATTGTTCCCTTGTTTGAAAAGGTCTTGAGTGCCAGCGACGCTGGTCGTATTGGTCGTCTGGTTCTTCCTAAAGCATGTGCAGAAGCGTATTTCCCTCCGATCTCTCAACCGGAGGGCCTCCCTTTGAGGATTCAGGACGTGAAGGGAAAAGAATGGGTATTTCAATTCCGATTTTGGCCAAATAATAATAGCCGAATGTATGTTTTGGAGGGCGTAACCCCCTGCATTCAGTCGATGCAATTACAAGCTGGAGATACCGTTACATTCAGTCGTATGGATCCAGAAGGAAAACTTCTAATGGGGTTCCGGAAAGCATCTAACAGCGTTTCAGTACAGAAGCAGGATTCACATTATCCAATGGATATGAGTGCTTTTCAAGGCGATGGGCTCATAGGAAATGCTGAGAGTCTACCTCTAATAAGCGGCTACTCTGGCCTTCTTCAGTCACTAAAAGGAAACGGGAGTCCTTCGATGACTCTGTTCCCTAAGCACGTCTACCTTGCGCAAAAGAAAAACATTGGGGCGAAGAGCAAACGACTACTTATTGATGGTCATGATTCTTTGGAGCTGAGACTCTCGTGGGAAGAGGTGCAGGATTTGCTCCAGCCACCACCAACTACCAAGCCAAACACCGTCTCAGTAGAGGATCATGAAATTGAAGAATTTGATGAACCACCTGTTTTTGGAAAGAGAAGTATTTTCGTAGTTCGTCTCTCCGGATGCTCGTGTTCTGCTCCCGACGAAATGGACTCGAGGGAACTTGAGAACCTTCTCAGAATGCACAAGGACTTCACCAAAAGGAGAGCATTAACATTCCCCAAACCAGTGCATGGACAGGCATCTCAGGAAAACGTCAAAGCACTCACAAACGGAGCAGGCAACACGAGCGAGCCAGGATCTTCATCTGTTGCAACAACTACAAGACATCCCAGGCATCGTCCGGGCTGCTCCTGCATCGTGTGCATACAGCCTTCCAGCGGGAAGGGCAAGCACAAGCCCATGTGCACGTGCAACGTCTGCATGACCGTGAAACAGCGCTTCAAAACCTTGATGATGCGCAAGAAGAAGCGCCAGTCGGAGCGTGAAGCAGAGATCGCGCAGAGGAATCAGTTTGCTAAGGAGGAAGCCGAGGTCGACAGCGTCGCAGCACCACAGCATGTTCAGTTGGATAATAATGCAAAGAGATCTGAAAGTGAGAATCTCTTGAAATGCCAGAGCGATGGTGGGCCTTGTCAAGAAAATGCAGAGAATTTTAATGGAGGATTGGACTTGAACTGCTATGCGGCGCCGTCGTCGCGCATAAGCATGATGAATCTGCTTCAAAAAGCCAGTTTGCCTTTGGACACATACCTGAGACAGAACGGTCTTACAAGCTTGGTGGTGGTGTCTGAGCAGCAAGAGAGTTTGACGCTTGTGATAGCTCAGGCTTCGGGAGAGACGACGACGCAAGCACGAGAGGATACCGCTGCCCAAGAGCACGAGGGCAGCAATGAGTTGTCGGAAAAAGAGCAGAGAGAAGATGATACGTGGTGA
Protein Sequence:
- >SMil_00010610-RA_Salv|Salvia_miltiorrhiza|B3|SMil_00010610-RA_Salv
LFVASTKSSSKAAIYRPIKTQIARAKRNTFLTENLCLEMEGGVCMNGICGSSSSVEWKKGWPLRSGGFATLCHNCGTAYKDLVFCETFHSEETGWRECTSCGKRLHCGCIASSTLLELLDTGGVNCTGCSKSCPRPYTPLEEKHKACGLSTENGTDRNSERIVPAQSGDDAKMDCQENLLPSPNANVTSRKLEDELASPEGIGYKLLSSSNQSPVGPSKNYDMFQESKSLHKSLVETNLSISLSASSNSNTLSGVMAEERQLNTAISSFQQGCRPRHLLPRVPTILAAGLETNSSSISQLRVARPPVEGRVKSQLLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLLMGFRKASNSVSVQKQDSHYPMDMSAFQGDGLIGNAESLPLISGYSGLLQSLKGNGSPSMTLFPKHVYLAQKKNIGAKSKRLLIDGHDSLELRLSWEEVQDLLQPPPTTKPNTVSVEDHEIEEFDEPPVFGKRSIFVVRLSGCSCSAPDEMDSRELENLLRMHKDFTKRRALTFPKPVHGQASQENVKALTNGAGNTSEPGSSSVATTTRHPRHRPGCSCIVCIQPSSGKGKHKPMCTCNVCMTVKQRFKTLMMRKKKRQSEREAEIAQRNQFAKEEAEVDSVAAPQHVQLDNNAKRSESENLLKCQSDGGPCQENAENFNGGLDLNCYAAPSSRISMMNLLQKASLPLDTYLRQNGLTSLVVVSEQQESLTLVIAQASGETTTQAREDTAAQEHEGSNELSEKEQREDDTW