Information report for SMil_00005941-RA_Salv
Gene Details
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Functional Annotation
- Refseq: XP_011096215.1 — B3 domain-containing protein Os07g0563300
- Swissprot: Q0D5G4 — Y7633_ORYSJ; B3 domain-containing protein Os07g0563300
- TrEMBL: A0A4D8YYR6 — A0A4D8YYR6_SALSN; Uncharacterized protein
- STRING: Migut.M01204.1.p — (Erythranthe guttata)
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g002739m
- Cucumis sativus: Cucsa.045980.2, Cucsa.045980.1
- Gossypium hirsutum: Gh_A10G0200
- Juglans regia: WALNUT_00027247-RA
- Nicotiana benthamiana: Niben101Scf06222g02001.1
- Nicotiana tabacum: XP_016514249.1, XP_016514250.1, XP_016514251.1
- Petunia inflata: Peinf101Scf00287g17023.1
- Populus trichocarpa: Potri.004G035300.1
- Prunus mume: XP_008224939.1
- Prunus persica: Prupe.4G036100.1.p
- Pyrus bretschneideri: Pbr000285.1
- Sesamum indicum: XP_011096215.1
Sequences
CDS Sequence:
- >SMil_00005941-RA_Salv|Salvia_miltiorrhiza|B3|SMil_00005941-RA_Salv
TTGTTAGGGTTTGTGTGTGTGATGTCGTCTACGACGGAGGTGTGTTTTAATTCAAACTGCAAAGATACGTCGGAGAAGTGGAGGAGAGGCTGGCGTCGCCGCACCGGCGAGTACGCTCACCTCTGTGATCGCTGCGCTTCTGCTTATGAGGATGGGAAATTTTGTGAGACGTTTCACATGAATGCGTCAGGGTGGAGATGCTGTGAATCTTGTGGAAAGACACCAAATCCAGCATGGCCACCACCTTTGCATTTCCTTCCTTCGCAGCCTGAAAGAATGAAGGATCTTTCAATGAAAACATGGAATGCTATAGCTGGCTCAGGTCCAGTTCCATGGCGTCAGGCTCCTTCTTTGTTCAATGGTTCCAGTATCCAAGCTAATGACCAACTGAAGGTGCCCTTCGAAGTAGATGTATCTGGTGGGATTGATAGGTATGGCCTTTGTGAGAGATTATCTATGGCTTCACCTGAGATAAAACAAGAGCGCTCCTATGAAAGGTTAGCTAATGGAAAGTTGAGACTTGGCCTACCTGAAACACTTCAGAATGGAAATATTGGACTCAATGTGAAGGAGCAGCATTGTCCATTCACAAGTGACTTTAAGCCCATCTATCCCAGAAATGATACTTCTTCAAACCTAAGTTTGGGCATAGCATCTTCATCCAAAAATGAAATAGATGATGCACCAGTTTCGGCTATTCTTTCACAATTACCATCTGTCCCAATTTCTCTGGGCAAACAGGTGTGCAGTCAGAGTGGAATGGACTCTTCTGGTGAGGGTCAAATACGTAATGGGAAGTCTCGAGGAGATGGGCGAAGCCGAAATCAGTTGCTTCCTCGCTACCGCCCCCAGATAACTGATGAAGAGCTTCAGCAAATCTCTGGAGATTCAAAATCCGTTATTACCCCTTTGTTCGAGAAAATGTTAAGTGCAAGTGATGCTGGACGGATTGGGCGCTTAGTGCTGCCAAAAAAGTGTGCAGAGGCTTATTTTCCAACAATCAATCATCCAGAAGGGTTACCTCTAAAAGTACAAGACCTTAAAGGGAAGGAATGGGTATTCCAGTTCCGATTTTGGCCAAATAACAACAGCAGAATGTATGTCCTGGAAGGAATAACTCCTTGTATACAATCAATGCAACTACAAGCTGGTGATGTTGTAACATTTAGTAGGTTGGAACCAGAAGGGAAGCTGATCATGGGTGGCAGAAAGGCTTCAGCGGTTCCATCATTAGATCAGGGAGAAGAAGTTAATGTGATAGGTAGTGAAGCTTCAAGTCCAGGTGATGCTAGTGCTAGAAGTAAATGTACCGATGTTATTTCTGTAAATGGTCACATGAAAGAAAAAATACTTGAAGACAAACCTGTCATGCATGTTAAGCGGAAGAATAGCAACTTAAATGCAAAAAGTAAACGCCTTAGGATTGAAAATGAGGACATGATGGAGCTGAAGCTCACCTACAAGGAAGCTCAAAGACTGATTCGTGCACCTGCGAAAATTGTTCCGTCATCTTTTGTTGTTGATGGGTGTGAATTTGAAGAATTTGAGGAAACTGAGCCAGTTATTGGGAGGCCTACTCTTCTGGGAATAGATCACTCTGGTGAAAAGATCCAGTGGGTTCAATGTGAGGACTGTTTCAAGTGGCGTAAGGTGCCTGCAAATGCTCTTGTTCCTTCAAAGTGGACCTGTTCAGATAATGGATGGGACCTTCACAGATCTATGTGTTCATCTGCTGAGGAATTAACTAACGAACAGCTTGAAGAAATGCTACCCGCCATGAACAGAGGCCCTTGTAATAAAGAGGAGAGCTCCGGATGGGATGCAGATTTATGTGTGGCTGTGGAAGGACTTGATACACTTGCTAATTTAGCTATTGAAGGGGAAGGAGAGGGCCTTGTAGGTTCTTCAGAGAACAGGACAAAGCATCCACGTCATAGGCGTGGCTGTACATGCATTGTCTGCCTTCAACCTCCCAGTGGGAAAGGGATTAAGCACCGGCAGTCTTGTGAGTGTGTCGTCTGTACTTCCTTAAAGCGTCGTTTTAGAACCTTGATGGAGAGGCGGGAGAAGAAACAAGTGGATAAAGAAACTGAACCACCCCAATCTTCATCTGAGAACTTACAAGGGCAGCTGTTACTTGAGAAGGAGCAGGATGTTGATGCATGTGTTGGTAGCGACACTGCAAACAGAAGCTTAAACGAGGAAGAGGCGCCGAATTCAGGGCATCTAGGAGAACCTAATGCTAGAAAATTGTCAAGTTCACCTTTGAAAGGTCAAATAGACCTAAATATCCAGCCTGAGCGGGAGGAAGATTTCTCACCTCGTTCTGATTGTGGGGCCGTGAAATGCTCTCTTCCGGGTTCTGCTGATAGATTTTTCAGGCAGCAGCATAGATCATTCGACTCCGATGCGATGGAGAATTTGTTAGGGAAGCAAGATGGAGTGGGATGTGTGAATATAATAAGTTGTGTGGCGTTAGACAAAAAGAGTGGTTAG
Protein Sequence:
- >SMil_00005941-RA_Salv|Salvia_miltiorrhiza|B3|SMil_00005941-RA_Salv
LLGFVCVMSSTTEVCFNSNCKDTSEKWRRGWRRRTGEYAHLCDRCASAYEDGKFCETFHMNASGWRCCESCGKTPNPAWPPPLHFLPSQPERMKDLSMKTWNAIAGSGPVPWRQAPSLFNGSSIQANDQLKVPFEVDVSGGIDRYGLCERLSMASPEIKQERSYERLANGKLRLGLPETLQNGNIGLNVKEQHCPFTSDFKPIYPRNDTSSNLSLGIASSSKNEIDDAPVSAILSQLPSVPISLGKQVCSQSGMDSSGEGQIRNGKSRGDGRSRNQLLPRYRPQITDEELQQISGDSKSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPTINHPEGLPLKVQDLKGKEWVFQFRFWPNNNSRMYVLEGITPCIQSMQLQAGDVVTFSRLEPEGKLIMGGRKASAVPSLDQGEEVNVIGSEASSPGDASARSKCTDVISVNGHMKEKILEDKPVMHVKRKNSNLNAKSKRLRIENEDMMELKLTYKEAQRLIRAPAKIVPSSFVVDGCEFEEFEETEPVIGRPTLLGIDHSGEKIQWVQCEDCFKWRKVPANALVPSKWTCSDNGWDLHRSMCSSAEELTNEQLEEMLPAMNRGPCNKEESSGWDADLCVAVEGLDTLANLAIEGEGEGLVGSSENRTKHPRHRRGCTCIVCLQPPSGKGIKHRQSCECVVCTSLKRRFRTLMERREKKQVDKETEPPQSSSENLQGQLLLEKEQDVDACVGSDTANRSLNEEEAPNSGHLGEPNARKLSSSPLKGQIDLNIQPEREEDFSPRSDCGAVKCSLPGSADRFFRQQHRSFDSDAMENLLGKQDGVGCVNIISCVALDKKSG