Information report for RrC519_p6
Gene Details
Functional Annotation
- Refseq: XP_018444162.1 — PREDICTED: B3 domain-containing protein REM8-like
- Swissprot: Q8H2D1 — REM8_ARATH; B3 domain-containing protein REM8
- TrEMBL: A0A3P6F703 — A0A3P6F703_BRAOL; Uncharacterized protein
- STRING: Bo1g011080.1 — (Brassica oleracea)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >RrC519_p6|Raphanus_raphanistrum|B3|RrC519_p6
ATGGAAAATGCATCACTCTTTTCTCCGGCGAACCCTCATTTCTTTCAGCCTCTTCTTACAGATTTCGAGAGCCACCTCAAAATTCCTGTGACGTTCTTCTCCAAGCATATAGAGGGAAACCACGTGGGTAAGACTGTTAAACTGAGATCAGATTCTTCGGACAGAACATGGAAAGTGAAGATGGAAGGTAATAGACTCACCGAAGGTTGGAAAGAGTTCGCCAAGGCACATAATCTTAGGGTCGGTGATGTCGTTATCTTCAGTCACGAAGGAGACATGTTGTTCCATGTTACTCCTTTTGGAACCAGTTGCTGCGAGATCCAATACGTACATTCTGCTTGCCACTACAAATACAAAGAAGAGAGTGACGTAATTGGAGAAGAATCTTCGTCCAAGCTAACATGTTTTAGCCAATCTGTGACGGCTTCAAATCTATCAAGAGGAGCTGTGGGTGTGCCCTTAGATTTTGCAAGTCAAAATGGTTTGAACAAAGGGAGGCGTGTGATAGCTTTGAGGAACCAAGAAGGAAAAACGTGGGAATCTGAATTAAAGACAACGAGTTCTGGTCAGGTCTTCATATGTCGAAACTGGAAAAGTTTTTGCACGGCGAGTAAGTTAGAAGTTGGAGACTCCTTCCAGTTGAAACTGCTTCAAAACAAGGAGAGGCCTGTGTTTCAACTCTGCAGCTGCTTAAAGGTGAGGCCGAAGAAGGAGACTCTATCCGAAGAAGGAGACAAAACTGAAAACCCCCGGTTTGTGAAGATAACTCCTACAGCAAGTAGCCTTGAGAATGGTAAACAGCATCTACCGGTACATTTCACGAGAGCGAACAAACTCAACAGGCCGGGGAAGATAGTATTGGTAGACAAAGACAAAGTCGAGTGGTCGATGAAGCTTAAGGCCGATACAAGATCTATGTATATTATTGGTGGTAAGGGTTGGAAAAGTTTCTGTGCAGCGAATGAAGTTCTCGCAGGAGAGTCTCTAACTCTGGAGTTGATCCGACGTGGGAGAATCCCTGTGCTCAAGTTTTGCTCCAAGGTTAAGAAAGAGACTCTACCCGAGGAAGATAATCTTGGTGAAACACCCCGGTTTGTGAAGATAACTACTACAGCAAGCAGCCTTGAGATTGGTAGACAGCATCTGCCGGTACATTTCACGAGAGGGAACAAGCTCAAGAGGCCGGGGAAGATAGTATTGGTAGACAAAGACAATGTGGAGTGGTCGATGAAACTTAATGAGGATATTAGAAGTGGAACTATGTATATCATGGGTGGTAAGGGTTGGAAAAGTTTCTGCGCAGCTAACGAAGTAGTCGTAGGAGAGCCTCTGACTCTGGAGTTGATCCGACGTGGGAGAATTCCTTTCCTCAAGTTTTGCTCCAAGATGGAGCAACCACCGTTTAAAACAAAGGCTGGAGGACGCAAGAGAACACGAGTTCAGAGACTGAGCCAGGAAAGTAGATCGAAGCATGACGTCTCAAATCAGGAGGCTAAGTGGTGGACGATGGAGAATAATGATGCATCATTTTCTCCGGCAAACCCACATTTCTTCCAGCGTCTTCTTTCCGGTTTCCAGAGCCACCTCAAAATTCCTCTGACGTTCTTCTCCAAGCATATAGAGGGAAACCACGAGGGTAATACTGTTAAACTGAGATCAGATTCTTCGGACAGAACATGGAAAGTGAAGATGGAAGGCCGTATGATAACTGAAGGTTGGACAGAGTTCGCCAAGGCACATAATCTTAGGGTCGGTGACTTTGTTATCTTCAGACACGAAGGAGACATGTTGTTCCATGTCACTGGTTGCTGTGAGATCCAATACGTACAGTCTGTTAGCAACTACAATAATAAAGAGGAGAGTGACGAAATTGGAGAAGAATCTTCGTCCAAGCTAACATGTTTTAGCCAATCTGTGACGGCTTCAAATCTATCAAAAGGAGCTGTGCTCTGTAGCTGCTCAAAGGAGACTCTATCCGAAGAAAAACTCCGGTTTGTGAAGATAACTCCTACAGCAAGTAGCCTTGAGACTGGTAAACAGAATCTACCGCTACATTTCACGAGAGCGAACCAGCTCAAGAGGCCGGGGAAGATAATATTAGTAGACAAAGACAAAATCGAGTGGCCGATGAAACTTAAGGAAGATATTAGAAGTGGAACTATGTCCATCATTGATGGTAAGGGCTGGAAAAGATTCTGTGCAGCGAATGAAGTAGTCGTAGGAGAGTCTCTAACTCTGGAGTTGATGACCCGACCTGGGAGACTTCCTTTGCTCAAGTTTTGCTCTAAGATGGACCAACCACCGTTTAAAACAGGACGCAAGAGAGTTCGAGTTCAGAGACTGAGACAGGAGAGTAGATTGGAGCATGACGTCTCAAATCAGGAGGCTTAG
Protein Sequence:
- >RrC519_p6|Raphanus_raphanistrum|B3|RrC519_p6
MENASLFSPANPHFFQPLLTDFESHLKIPVTFFSKHIEGNHVGKTVKLRSDSSDRTWKVKMEGNRLTEGWKEFAKAHNLRVGDVVIFSHEGDMLFHVTPFGTSCCEIQYVHSACHYKYKEESDVIGEESSSKLTCFSQSVTASNLSRGAVGVPLDFASQNGLNKGRRVIALRNQEGKTWESELKTTSSGQVFICRNWKSFCTASKLEVGDSFQLKLLQNKERPVFQLCSCLKVRPKKETLSEEGDKTENPRFVKITPTASSLENGKQHLPVHFTRANKLNRPGKIVLVDKDKVEWSMKLKADTRSMYIIGGKGWKSFCAANEVLAGESLTLELIRRGRIPVLKFCSKVKKETLPEEDNLGETPRFVKITTTASSLEIGRQHLPVHFTRGNKLKRPGKIVLVDKDNVEWSMKLNEDIRSGTMYIMGGKGWKSFCAANEVVVGEPLTLELIRRGRIPFLKFCSKMEQPPFKTKAGGRKRTRVQRLSQESRSKHDVSNQEAKWWTMENNDASFSPANPHFFQRLLSGFQSHLKIPLTFFSKHIEGNHEGNTVKLRSDSSDRTWKVKMEGRMITEGWTEFAKAHNLRVGDFVIFRHEGDMLFHVTGCCEIQYVQSVSNYNNKEESDEIGEESSSKLTCFSQSVTASNLSKGAVLCSCSKETLSEEKLRFVKITPTASSLETGKQNLPLHFTRANQLKRPGKIILVDKDKIEWPMKLKEDIRSGTMSIIDGKGWKRFCAANEVVVGESLTLELMTRPGRLPLLKFCSKMDQPPFKTGRKRVRVQRLRQESRLEHDVSNQEA