Gene Details:

• Gene ID: RrC40065_p1
• Gene Family: B3 Family
• Description: B3 Family protein
• Species: Raphanus raphanistrum
• Source: B3 family gene from PlantTFDB

Protein Features:

• PROSITE profile:  PS50863
• SMART:  SM01019
• SuperFamily:  SSF101936
• Pfam:  PF02362
• Gene3D:  G3DSA:2.40.330.10
• InterPro:  IPR003340    IPR015300

Annotation Proteins:

• Refseq:  XP_018487669.1  — PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120-like
• Refseq:  XP_018487676.1  — PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g51120-like
• Swissprot:  Q9C6P5  — RAVL2_ARATH; AP2/ERF and B3 domain-containing transcription factor At1g50680
• TrEMBL:  A0A078HID1  — A0A078HID1_BRANA; BnaC06g03900D protein
• TrEMBL:  A0A0D3CPU1  — A0A0D3CPU1_BRAOL; Uncharacterized protein
• TrEMBL:  A0A3P6GPU4  — A0A3P6GPU4_BRAOL; Uncharacterized protein
• STRING:  Bo6g022450.1  — (Brassica oleracea)

Gene Ontology:

• GO:0003677  — Molecular Function — DNA binding

Family Introduction:

• The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
• All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
• The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

• The plant B3 superfamily.   DOI:  10.1016/j.tplants.2008.09.006 ;  PMID:  18986826

Sequences: