Gene Details:

  • Gene ID: Pgl011805
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Picea glauca
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_027339701.1  — auxin response factor 1-like isoform X1
  • Refseq:  XP_027339702.1  — auxin response factor 1-like isoform X1
  • Refseq:  XP_027339703.1  — auxin response factor 1-like isoform X1
  • Refseq:  XP_027339704.1  — auxin response factor 1-like isoform X1
  • Swissprot:  Q94JM3  — ARFB_ARATH; Auxin response factor 2
  • TrEMBL:  B8LRW7  — B8LRW7_PICSI; Auxin response factor
  • STRING:  XP_004485416.1  — (Cicer arietinum)

Gene Ontology:

  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Pgl011805|Picea_glauca|B3|gnl|UG|Pgl#S40866073
    NAGACAGGCAACTCGGTATGCCCAGAGCTTTGGCATGCCTGTGCTGGTCCTCTCATATCTCTGCCCCCTAAGGGCAGTCGTGTGGTGTACTTTCCCCAGGGTCACCTGGAGCAGATTGCAGACAATGAGCTTCACAAGGTTGGCCGTGGCTCCTTCCTCAACATCAACCAGGCGGTTACCCCGATGGCAGAGGAAGCATCTTCTGCAGCATCCTTGAATATACCACCATCGTCCATAAGTCAGGCTGTGAACCAACAGATGCTTTCATATAAGCTCCCTCCCCAAATTCTCTGTCGTGTGCTGAATGTCAATCTACACGCCGACCAGGAGATGGATGAGGTCTATGCACAACTGACATTAGTTCCTGACTCCGAGAAGAGTGAGAAATGCATAGAGGAGCAACTGCCTGTACCTCCATCCAGCACTCCTCATATGTTCTGCAAGACGCTAACGGCTTCTGATACAAGTACCCATGGTGGGTTTTCAGTTCCTCGAAGGGCTGCAGAGGACTGCTTTCCGCCCTTGGATTATAGTCAACAAAGGCCTTCTCAAGAGCTTGTTGCAAAGGATTTGCATGGAAGAGAATGGAGATTCCGGCATATATTCAGGGGTCAGCCACGCAGGCATTTGCTCACTACTGGATGGAGTGTCTTTGTTAGTTACAAAAGGCTTGTTGCTGGAGATGCTGTACTTTTTCTGCGGGATGAAAATGGAGAATTGAGGTTAGGAATTCGAAGAGCTTCCCAACAACAAAGCAGTGTACCTTCTTCAGTGCTCTCCAGCCATGGCATACATTCAGGTGTGCTAGCTGCTGNN
Protein Sequence:
  • >Pgl011805|Picea_glauca|B3|gnl|UG|Pgl#S40866073
    XTGNSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVTPMAEEASSAASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKSEKCIEEQLPVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAX