Information report for NNU_006551-RA
Gene Details
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Functional Annotation
- Refseq: XP_010255061.1 — PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X1
- TrEMBL: A0A1U8A0H4 — A0A1U8A0H4_NELNU; B3 domain-containing protein Os01g0723500-like isoform X1
- STRING: XP_010255061.1 — (Nelumbo nucifera)
- GO:0005773 — Cellular Component — vacuole
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Gossypium arboreum: Cotton_A_33039_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D01G1010
- Manihot esculenta: Manes.18G025700.1.p
- Populus trichocarpa: Potri.014G036900.1, Potri.002G129900.1, Potri.002G129800.2, Potri.002G129800.1
- Ricinus communis: 30170.m013945, 30170.m013944
- Sesamum indicum: XP_011083780.1
- Ziziphus jujuba: XP_015884753.1, XP_015884752.1, XP_015884751.1, XP_015884750.1, XP_015884749.1, XP_015884748.1, XP_015884746.1
Sequences
CDS Sequence:
- >NNU_006551-RA|Nelumbo_nucifera|B3|NNU_006551-RA
ATGGGGGGAAGGTGTGATGAATGCAGATCAAGCGATGAGTATGTTTATTGGACCCACTTCCAGTCCAGACAGTTCTTTCAGATCCTCACCAACGATTTCGATCAGAAGCTTAACATTCCCCCAAAATTCATGCACCACGTAAAGAAAGAAATCTCGAGCTCCGTCTCTCTTAGAGGTCCAAGTGGGAAAACTTGGAAAGTTGAAATTGTGATGGATGAGGATGGCCGCTGCTTCTTTCAACACGGTTGGAATACATTTGTTCAGGAAAATAGTCTGAAAGAGAAGAACGTCTTGGTTTTCAGATACACCGGGAACTCGATTTTCGATGTCTTACTGTTTGATCAGTTTAGCCTCTGTGAGAAGGTGAGCTCGTATTTCCCAAGCAAGTGCGGATGTAATCTGAAAGAAAGTTCAACGGAGAGCTCTGTAGAATTTATATATTCATCTGTAGTGGATGTGGATGAAAGAAAAAGAGGACGGGGAGGACGTGGTATTAAATGCTCTCCATCATTCAGAAGTAAAGGGAAAGAGGCCGAGAGATCAGAACCATTTAGTTGGCGTAATACATCTCAAGCTAAAAGGAAGAAGATTGAGAAGAAGAGTGCCACACCTCTCCCTGCTAAGCGGAAACCCAAAAGAGAAGAACCTGCGGATTATTCAGGTGATGAAGAATTATCTGAAAGCTTAAACCGGGCGTTTCATATACACTTTCTATCAAAAAGACGACCTGTTACTGAAGTGGAGATGCTGAGGACCCTTGAATTGGCCAATGAAGCTTTAGTTTTGTCAGAAACAAGTTTCAAAATAGTTATGCAACCAACCCATGTGTATAAGAGATTTTACCTGACAATCCCAGCTGCGGCTGTGAGAATGCATTTTCTTCCTAGAAGTGAAGATGTCATTCTTTCGGTAGATGGAAAGACTTGGCGTGTGATGTTTCGTTCGCGATCACCCGGTCAAGGAGCCTTTTTAAACGGATGGCCAAAATTTGTATTGCATAACAACTTGGAAGAAGGCGATGTCTGCGTTTTCGAGGTTGGGAAGAGAAGGAATAACTTTTTACACATTGACGTAAAGATTTTTCGGGTTGTCGAAGAGGTGGTGCCCCTACAGTTTCCGCTTTCCACCTGTTTGTATATCATGTCTCCCAAGGCCATGTTTGTTGGCTGGTGCCCACCTGCCAAAAACGTTAAACCTCTTCCTCTTAGAAAGTGTAAGATACCACGACCTTTTATTAAGCATTTCAATGGATCTGTTCCCGCAACATTCATCCTTAGAAGTCCGACCAAGAAACGTTGGAGGGTAAGGGTGAAAAAGGTCAAGGAACAATGGTACCTCCAAAAGGGTTGGCAGAGCTTTGTGAAATTTCATTCTTTGGTGGTGGGGGATCTTTTAATTTTCAGCTACCGTGGTGGTGCCAAATTCAGTGTCAAGATATACGACCGAAGTGCTTGTGAAAAGGAACTACCTTTCTCTTCTTCAGCCTACACACAGAGAAATCCAGTTGATTCTTCCCACCCCCACCCAAAGAAGGGAAGGCGTGGAGAAAGGAAAGCCGGAGGCCTGCAAAAGCCAGTTTGGGAAAGGCCAAGCGTCCAAGACTCGAAGTCGATATTTAGGCCAAAAGAAATTCGATGGGTCAAGGTAGCTAGACCGTATACCGTAGAGATGGGTAGAATGATTCCGTATCGACGCAGCAGGCCCTCCTTCTTCAAAGTCTTGGTCGCCCCCGACTTCTCCAAACTGCTTGGGATACCACCACTTTTTATCAAGCATTTCAATGGATCGGTGCCTAAAAGACTCACCCTCAGAAGTCCAACCGGGAAAAGTTGGCCTGTTAAAGTGAAAAAGATTGACGAAAAATTCTATTTCCATACGGGTTGGCAGAGATTTGTAGAACATCATTCTTTGGTGTGGGGGGATTTTCTAGTTTTCAGTTATAACGGCAAGTCCAAATTCAGCGTCAAGATATACGACAGAAGTTCTTGTGAAAGGGATCTGCCTTCAGCTCCGAGTAACGTTCATTCCCAGCCAAGGAAACAAAAGAGAGGTAAAGAAATGGCCAGAGTCACCACGGAAGTCGTTGTTCAGAATCACGGTATGAGTGCTTCCCACCCAAACAAAGAAAAGCCAGGCACATTAATGGCCAGAGCCCGCACTAAAGTAATTGCTCAGATTTATGAGAGTGCGAGTGATTCTCACCCAAGGAAAGAAAAAAAAGGCGATGTTATAGCTAGGTCCACCAAGAAAGGTATTGATCGTGCTCTGAGAAAGAGTTATTCTCACCCAAAGATGGACAAGTGTGGCAAAGCAATGGCCAAATCCACCATGAAAGCAGTTGTTTCTAGCAAGGGAAACGGTGGCTCTGGAAAACCAAGGAAGAAATCAAATTACGGGATTGAAAGGCAACCAAGAAGTGAGGCAATTGAAGCTGCGTCTTCGTACAAAACAGAATTTCCACATTTCGCAGCACTTTGTGGAAAGTCCAGAAGAAGTCATATGGTTGTTCCAAAGGCTGTAGCAAGAAAAGTTGGGATCACAGGCAAGGGAAAAGCAGTGCTATTGGATCCTAAAGGGAGGTCATGGCGTGTGAGTTTCGCTCCAAGAACGGATGGTCGTGTAGATATTATAAGCGGGTGGGCAGCTTTTTGGAAAGCCAATAATATAGTAGAAGGTGAAGCATGCCACTTTGAGTTCATCCAAGGAACAGTTGCAGGGAAAGTGATCATATGCGTCAACATATTCCGAGCTGCGGGATTCGGAGAACTCGCTCGCTTCTCTAATATTATACCTATGGCCTTCTTCGGCTTGTGA
Protein Sequence:
- >NNU_006551-RA|Nelumbo_nucifera|B3|NNU_006551-RA
MGGRCDECRSSDEYVYWTHFQSRQFFQILTNDFDQKLNIPPKFMHHVKKEISSSVSLRGPSGKTWKVEIVMDEDGRCFFQHGWNTFVQENSLKEKNVLVFRYTGNSIFDVLLFDQFSLCEKVSSYFPSKCGCNLKESSTESSVEFIYSSVVDVDERKRGRGGRGIKCSPSFRSKGKEAERSEPFSWRNTSQAKRKKIEKKSATPLPAKRKPKREEPADYSGDEELSESLNRAFHIHFLSKRRPVTEVEMLRTLELANEALVLSETSFKIVMQPTHVYKRFYLTIPAAAVRMHFLPRSEDVILSVDGKTWRVMFRSRSPGQGAFLNGWPKFVLHNNLEEGDVCVFEVGKRRNNFLHIDVKIFRVVEEVVPLQFPLSTCLYIMSPKAMFVGWCPPAKNVKPLPLRKCKIPRPFIKHFNGSVPATFILRSPTKKRWRVRVKKVKEQWYLQKGWQSFVKFHSLVVGDLLIFSYRGGAKFSVKIYDRSACEKELPFSSSAYTQRNPVDSSHPHPKKGRRGERKAGGLQKPVWERPSVQDSKSIFRPKEIRWVKVARPYTVEMGRMIPYRRSRPSFFKVLVAPDFSKLLGIPPLFIKHFNGSVPKRLTLRSPTGKSWPVKVKKIDEKFYFHTGWQRFVEHHSLVWGDFLVFSYNGKSKFSVKIYDRSSCERDLPSAPSNVHSQPRKQKRGKEMARVTTEVVVQNHGMSASHPNKEKPGTLMARARTKVIAQIYESASDSHPRKEKKGDVIARSTKKGIDRALRKSYSHPKMDKCGKAMAKSTMKAVVSSKGNGGSGKPRKKSNYGIERQPRSEAIEAASSYKTEFPHFAALCGKSRRSHMVVPKAVARKVGITGKGKAVLLDPKGRSWRVSFAPRTDGRVDIISGWAAFWKANNIVEGEACHFEFIQGTVAGKVIICVNIFRAAGFGELARFSNIIPMAFFGL