Information report for mrna17107.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004296523.1 — PREDICTED: MATE efflux family protein LAL5-like isoform X2
- Swissprot: Q9LUH2 — DTX19_ARATH; Protein DETOXIFICATION 19
- TrEMBL: A0A2P6QAM9 — A0A2P6QAM9_ROSCH; Protein DETOXIFICATION
- STRING: XP_004296523.1 — (Fragaria vesca)
- GO:0006855 — Biological Process — drug transmembrane transport
- GO:0016020 — Cellular Component — membrane
- GO:0003677 — Molecular Function — DNA binding
- GO:0015238 — Molecular Function — drug transmembrane transporter activity
- GO:0015297 — Molecular Function — antiporter activity
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G23560, AT3G23550
- Brassica napus: BnaTT12.C06, BnaTT12.A07
- Daucus carota: DCAR_010718
- Glycine max: GmMATE100
- Malus domestica: MDP0000252726, MDP0000242456, MDP0000212684
- Oryza sativa: PEZ1, OsMATE2, OsMATE1
- Prunus mume: XP_008226603.2, XP_008226600.1, XP_008226826.1, XP_008226602.1
- Prunus persica: Prupe.4G178300.1.p, Prupe.4G206300.1.p, Prupe.4G178100.2.p, Prupe.4G178100.1.p, Prupe.4G206300.2.p, Prupe.4G178200.1.p
- Pyrus bretschneideri: Pbr038296.1, Pbr017402.6
- Solanum melongena: Sme2.5_01078.1_g00002.1
Sequences
CDS Sequence:
- >mrna17107.1-v1.0-hybrid|Fragaria_vesca|B3|mrna17107.1-v1.0-hybrid
ATGCCAGAAAACACAGCAAGTTCAGATACTAATGCAGCAGTGCCCTTATTGGAGTCGGGAGTTGATGGAGGTGAAGGACTCAGGTGGTGGAACAAGGTTTTGGATGTGGAGGAGGCCAAGAATCAGGTCTTGTTTTCGTTGCCGATGATTCTGACCAATGTTTTCTATTACTTGATCACTTTGGTTTCGGTTATGTTTGCTGGTCACCTTGGTGAGCTTGAGCTTGCTGGGGCAACACTGGCCAATTCATGGGCTGTTGTCACTGGATTTGCTTTCATGGTTGGGTTGAGTGGAGCACTTGAGACCCTGTGTGGGCAAGGATTTGGTGCAAAGTCATACAGAATGTTGGGAATTTATCTGCAAGCCTCTTCCATCATATCTTTCCTCTTCTCTATCATCATATCTGCAGTATGGTTCTACACCGAGCCCATACTTATCTTACTCCAGCAAGATCCTCAAATTTCGATGTCTGCTGCGGTTTATATTAAGTATCTGATTCCAGGATTATTTGCATATGGGTTCTTGAATAACATATTGAGATTTCTTCAGACACAATCTGTAGTCATGCCATTGGTTTTTCTCTCAGCGATCCCATTGGTTTTTCATATTGGCATTGCATACGGTTTGGTACATTGGACAGCTCTTGGTTTCAAGGGAGCTCCACTAGCAGCTTCAATTTCATTATGTATATCGTTTCTCATGCTGGCTACGTATGTTGTTTGTGCTAAGAAATTTGAGCACACATGGGAAGGATTTTCATTAGAATCATTCCACTATGTCCTGACTGACTTGAAACTTGCTCTCCCCTCTGCAGCGATGGTTTGCTTGGAGTACTGGGCTTTTGAGATTCTTGTGCTCTTGGCAGGATTAATGCCAAACTCGGAACAAACCACTTCACTAATTGCAATGTGTGTGAATACAGAAACAATTGCTTACATGCTTACATATGGCCTCAGTGCTGCAGCAAGCACAAGGGTGTCAAATGAATTGGGAGAAGGCAATCCAGACCGAGCTAAGAATGCGATGGCTGTGACTCTGAAGCTCTCTGTGCTTCTTGGTGTCTTAGTTGTTCTGGCGCTAGCACTTGGTCACAATATCTGGGCTGGCTTCTTCAGTGACAGCACTACAATAATTAAGCAATTTGCTTACATGACACCATTTCTTGCAATTTCAATAATGCTTGATTCGGTGCAAGGTGTCTTATCAGGTGTGGCTAGAGGTTGCGGTTGGCAGCACTTGGCTGTCTATGTGAACTTGGGCACATTCTATTTGATTGGTGTGACAATCGCATGTCTTCTTGCGTTTAAGCTGAAACTATATGCCAAGGTCTTCGTCGTTCCCTCAGCCGCCGCCCTTGTCCTCAAGGCCCTCATGGAGCTGGAGGGCGATCGCAAGAAGGTCAAGAACATCATGCTCAATGGCGCCATCGAGATTGCTAAGATAGACGAAGATGTGAGATCTGCTGGAGTGTTGTTGAAGAACCCAGATTCTTCTGCGAAAACCATTTCAATGAAAACCCAGATTCTGGAGTCTTTGATTTCTGGAGCTAAGCTGAAGGCTGAAATGGGTAGGAAACCAACTAAGCAACCATCCTTTTTCAAGGTCCTGCTTGATGACTTCGCTAATCATCTGCGTATACCACATAAGTTTACCAGGTACCATATTCGACCATCACTTGGCAAATGTGTTCTTAGAGGCCCTTGTGGAAAAAGAAGTGTGGAGCTGGAAAGGAGAAAGAATGGCTTGTTCTTCCACAGTCATGGTTGGCATAGCTTTGTGAAGGATCATCTTTTACAATTTGGCGACTTTCTGGTTTTCCAATATGATGGTAAATCAAAGTTTAAGGTTAAAGTATATGATCGAACATGTTGTGAGATAGATGTAGAAGTGCCCAAGAGGAGAAATGGCCTTCCTACTGCTCCCTCAGTGAATGAAGGCTACCAATTAGCTTGGGTAAAAGATGAAATTCTTGATGGCCTGGAAACCGAAAACTGCAATAGTGACACTGAAAATGCTGACAAGAGAAGGCGAAATAATTATGGAAGGACGCCAAAGGTTGAGGATGGTAAAGAAACATCGACTAGACCCATCATCTTCAAATCGGAGTATTCATGTTTTCAAGCAACTTTGAAGGGAAGGTGTTCACGATATAGGATGGCTATTCCAAAGGATCTAGTCGTGTCCAAAGGGCTTAAGAGTAAGAATACTGTAGAAATTGAAGACTCAACTGGGAGATTGTGGCCTGCGAAGCTTGTCAAAGGGAACTATGTGTCCATGTCAACAGGTTGGGGAGAATGTTCTAAAGCCAACAACATTGTTGTTGGGGACACCGTTGTTTTTGAGTTTGTTCAGCAAACTGTAATGCGCCTTCATGTTTTTAAAAAAGGTCTGGGAACAAGAGGAGGAAATAATGTCTATTTCTGTGGTACTTGA
Protein Sequence:
- >mrna17107.1-v1.0-hybrid|Fragaria_vesca|B3|mrna17107.1-v1.0-hybrid
MPENTASSDTNAAVPLLESGVDGGEGLRWWNKVLDVEEAKNQVLFSLPMILTNVFYYLITLVSVMFAGHLGELELAGATLANSWAVVTGFAFMVGLSGALETLCGQGFGAKSYRMLGIYLQASSIISFLFSIIISAVWFYTEPILILLQQDPQISMSAAVYIKYLIPGLFAYGFLNNILRFLQTQSVVMPLVFLSAIPLVFHIGIAYGLVHWTALGFKGAPLAASISLCISFLMLATYVVCAKKFEHTWEGFSLESFHYVLTDLKLALPSAAMVCLEYWAFEILVLLAGLMPNSEQTTSLIAMCVNTETIAYMLTYGLSAAASTRVSNELGEGNPDRAKNAMAVTLKLSVLLGVLVVLALALGHNIWAGFFSDSTTIIKQFAYMTPFLAISIMLDSVQGVLSGVARGCGWQHLAVYVNLGTFYLIGVTIACLLAFKLKLYAKVFVVPSAAALVLKALMELEGDRKKVKNIMLNGAIEIAKIDEDVRSAGVLLKNPDSSAKTISMKTQILESLISGAKLKAEMGRKPTKQPSFFKVLLDDFANHLRIPHKFTRYHIRPSLGKCVLRGPCGKRSVELERRKNGLFFHSHGWHSFVKDHLLQFGDFLVFQYDGKSKFKVKVYDRTCCEIDVEVPKRRNGLPTAPSVNEGYQLAWVKDEILDGLETENCNSDTENADKRRRNNYGRTPKVEDGKETSTRPIIFKSEYSCFQATLKGRCSRYRMAIPKDLVVSKGLKSKNTVEIEDSTGRLWPAKLVKGNYVSMSTGWGECSKANNIVVGDTVVFEFVQQTVMRLHVFKKGLGTRGGNNVYFCGT*