Information report for MELO3C007309P1
Gene Details
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Functional Annotation
- Refseq: XP_008439895.2 — PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein Os07g0563300-like
- Swissprot: Q0D5G4 — Y7633_ORYSJ; B3 domain-containing protein Os07g0563300
- TrEMBL: A0A1S3AZU4 — A0A1S3AZU4_CUCME; LOW QUALITY PROTEIN: B3 domain-containing protein Os07g0563300-like
- STRING: XP_008439895.1 — (Cucumis melo)
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004485711.1
- Citrus sinensis: orange1.1g005945m, orange1.1g005563m, orange1.1g005562m, orange1.1g003324m, orange1.1g003322m, orange1.1g002739m, orange1.1g002554m, orange1.1g002489m, orange1.1g002626m
- Cucumis sativus: Cucsa.045980.1, Cucsa.045980.2
- Gossypium arboreum: Cotton_A_25584_BGI-A2_v1.0, Cotton_A_03847_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A05G1407, Gh_D05G1572, Gh_A10G0200
- Medicago truncatula: Medtr2g011940.1
- Populus trichocarpa: Potri.004G035300.2, Potri.004G035300.1
- Prunus mume: XP_008224939.1
- Prunus persica: Prupe.4G036100.1.p
- Pyrus bretschneideri: Pbr000285.1
- Ziziphus jujuba: XP_015887956.1
Sequences
CDS Sequence:
- >MELO3C007309P1|Cucumis_melo|B3|MELO3C007309P1
ATGCCGAAACAGTCTAGCTTTGTGAAGGAGGATTCATCTACTATGCAATATGGTTTGAATATACCTTATGCACCTCCAAATGAACCAAGTGCTCGGGGTAGGATTTCTGGAACTCATTTGAGACCAACACCACTATCTTCTCTGCCAAAGCAGATCCATACCAATTTGCAAAATGGTGCTGACTCTAACGAAACACAGCTGCGTAATGGAAGGCCTAGAGGAGAATCACGTGGAAAGAATTATTTGCTTCCGCGATACTGGCCTAGATTTACTGACCAAGAGCTACAACAAATATCTGTTGACTCGAATTCTGTAATTACTCCATTGTTTGAGAAAATGTTGAGCGCTAGTGATGCTGGGCGGATTGGGCGTTTGGTGCTTCCTAAAAAATGTGCAGAGGCCTATTTTCCATCAATTTCCCAGCCCGAGGGATTGCCTCTAAAAGTACAAGATGCAAAAGGAAAAGAATGGATATTTCAGTTCCGTTTCTGGCCTAACAACAATAGCAGGATGTATGTTCTTGAGGGGGTTACTCCTTGCATACAGTCCATGCAACTGCAAGCAGGTGACACAGTGACATTTAGTCGGTTAGAGCCAGAAGGGAAGCTGGTTATGGGTTTCAGAAAGGCCTCAGCTACAGCCGACCAGGAAAATGAAACAAACAAGACCAAGAATGGAGCTCCTGTACAAGGAGATGTCAGTAATATAAAAGTTAAAGCTGAACTGGCTGATCCTACTTCGTGGACAAAAGTTGATAAGTCTGGATACATAGCGAAAGAGGTCTTGGGTGCCAAACCTTCAATTTCTAGAAAGAGGAAAAACAGCACCCTAGGTTCTAAGAGTAAGCGCCTTAGAATTGACAACGAGGACATGATTGAGTTGAAGATAACTTGGGAAGAAGCCCAAGGATTGCTTCGGCCTCCTCCAAACCAAGTTCCAAACATTTTGGTCATTGAAGGTTTTGAATTTGAGGAATATGAGGAGGCACCTGTACTTGGGAAGCCATCAATTATACCACCCGATAATACAGGTGAAAGGATTCAATGGACGCAATGTGAAGACTGTTTGAAGTGGCGAAAATTGCCAGCCAGTGCTCTTCTTCCCTCAAAATGGACTTGTTCTGACAACTCATGGGAACCTGAGAGATCTTTTTGCTCAGCACCTCAAGAGTTGTCAACAGAGCAGCTAGAAGAACTACTTTCCCCGGTTGCTCCTGTCAAGAAAATGAAGGCTGCCAAACTAGAACCAGATAATGTTGAAGCTCTGGAAGGACTTGACACACTTGCAAATTTAGCCATCTTAGGAGAGGGTGAGGCAAGCCAGACACCTGGCCAAGCAACCACAAAGCACCCTCGACATAGACCTGGATGCTCATGCATAGTATGCATTCAACCACCGAGCGGGAAGGGACCAAAACATAAGCAGACGTGCACTTGTAATGTGTGCCTGACAGTAAAGCGTCGGTTTCGAACATTAATGCTTAGACGAGAAAAAAAGCAATTTGAAAAGGAAGCAGAAACTACGCGCCAAAGGAATCAATTTTTGGATGAAATGTTCCCGGATAGATCAATGGACGATGAGTCTCTTACTTGCAGTAATACAAGTACAAGTAAGCTTATCGAGGAAGGAAAAATGAACGATGGCTCTGATGAGGATCCTAATAGAAATAAGCCATCCACTTCGCCTTTTAAAGGCCAGATTGATTTGAACATGCAGCCCGAGCGGGAGGATGAGCTGTCACCAGGTTCTGATTCTGGAAGCATGATGAAAATGCTTCAAGATACTGGGGACAGGTTTCTTGAACAGCAGAGGTCGAACTCCGGTGGTACTCGAAGTTCATCAAGCGATCCGTTAGAACCTGGAGGGGAACGCGAACACAAAGGTGAGAGTAGTAGCAATGTCATTGATCGCAGTAGCAACAATTTAGACGTTGACAAGGACCATCCTGCAACCTTGTCCTTGAATCCTTCGGCATCCATGTCAGCTACAGGTTGA
Protein Sequence:
- >MELO3C007309P1|Cucumis_melo|B3|MELO3C007309P1
MPKQSSFVKEDSSTMQYGLNIPYAPPNEPSARGRISGTHLRPTPLSSLPKQIHTNLQNGADSNETQLRNGRPRGESRGKNYLLPRYWPRFTDQELQQISVDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPSISQPEGLPLKVQDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASATADQENETNKTKNGAPVQGDVSNIKVKAELADPTSWTKVDKSGYIAKEVLGAKPSISRKRKNSTLGSKSKRLRIDNEDMIELKITWEEAQGLLRPPPNQVPNILVIEGFEFEEYEEAPVLGKPSIIPPDNTGERIQWTQCEDCLKWRKLPASALLPSKWTCSDNSWEPERSFCSAPQELSTEQLEELLSPVAPVKKMKAAKLEPDNVEALEGLDTLANLAILGEGEASQTPGQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQFEKEAETTRQRNQFLDEMFPDRSMDDESLTCSNTSTSKLIEEGKMNDGSDEDPNRNKPSTSPFKGQIDLNMQPEREDELSPGSDSGSMMKMLQDTGDRFLEQQRSNSGGTRSSSSDPLEPGGEREHKGESSSNVIDRSSNNLDVDKDHPATLSLNPSASMSATG*