Gene Details:

  • Gene ID: Medtr7g059330.1
  • Gene Name: MTR_7g059330
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Medicago truncatula
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_024625356.1  — B3 domain-containing transcription factor ABI3
  • TrEMBL:  A0A072U0Z8  — A0A072U0Z8_MEDTR; B3 domain transcription factor
  • STRING:  XP_004515628.1  — (Cicer arietinum)

Gene Ontology:

  • GO:0006357  — Biological Process — regulation of transcription from RNA polymerase II promoter
  • GO:0009657  — Biological Process — plastid organization
  • GO:0009733  — Biological Process — response to auxin
  • GO:0009737  — Biological Process — response to abscisic acid
  • GO:0009793  — Biological Process — embryo development ending in seed dormancy
  • GO:0031930  — Biological Process — mitochondria-nucleus signaling pathway
  • GO:0045893  — Biological Process — positive regulation of transcription, DNA-templated
  • GO:0005634  — Cellular Component — nucleus
  • GO:0005829  — Cellular Component — cytosol
  • GO:0001076  — Molecular Function — transcription factor activity, RNA polymerase II transcription factor binding
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Medtr7g059330.1|Medicago_truncatula|B3|Medtr7g059330.1
    ATGGAGTGTGGTTTAGATCTGCATGCAAAGTTGGTGAATGAAACAGAACAAGTTGGTTTTGGAAATTTAGCAGAAGAAAATTGGCTTAATAATACTACAAATGATCAAGATGGTGATCTTTTAGGTATGAATATGAATGATGATGCATCTATGTTCTATGCTGATTTTCCTCCTTTACCTGATTTTCCATGCATGTCATCATCATCCTCATCTTCATCATCTTCAACACCATTGAAAACCATTGCATGTACTTCAACTACAACAACTACTACCTCTTCTTCTTCCTCAGCTTCTTCTTCATCTGCAGCTTCTTGGGCTGTTTTGAAATCAGATGTTGAAGTAGATCATCAAGGTTATCAAAAACATGGTCATCCATTAGATTATCATCATGGTCATCCTCCAACAACTTTGTCATCAACTGCTTCTATGGAGATTTCTCAACAACAGCAACAAGATCTTGGTGTTTCTAACAATGATGTTGTTGTTGGTGGTGGTGATTGCATGGATGATGTTAACATTATGGATACTTTTGGTTACATGGAGCTTTTAGAAGCTAATGAATTTTTTGACCCTGCTTCGATTTTTCAAAATGAAGATGAAAACCCTTTAGTGGATTTCACTCAAGAGCAACAAGTTCAAGTGCAAGACGGATATCAACAACATCAACAAGTTCCGATGATAGTGCATGATGATCGGGAAAATAAACCGCAACAAGTGAATATCGAGGAGAATAACGACGATGTTTTTGTGTGTGACGGTGTAAATGGGGAAGAGAGTATTCAAGGAGATGAATTAGGTGCATGTGATGGTGTAAGTGATGAAATGAGTATGGTTTTCTTGGAGTGGCTTAAATCGAACAAAGACAGTGTCTCCGCGAATGATTTGAGGAATGTGAAGCTTAAGAAATCAACGATTGAAAGTGCTGCTAGGAGATTAGGTGGTGGAAAAGAAGGGATGAAACAATTGTTGAAGCTCATTCTTGAATGGGTTCAAACTAGTCATCTTCATAACAAAAGACTCAAAGAAAACGCCAACACGAACACAATAATACCTTCAAATATTGTTCCTCAACAACATCATTTTCAAGATCCGTGTCAGAACCAAAACACAGCAAACACATTTGCACCTGAATCGAACGCATGTTTCAACCAAACATCATGGCTAGATCAAACACCTCTCATTGTACCTCCACAACAATTTTCACAACCAATGGTTGGAGTTGGAGTTGGATTTGTTGCTGATCCTTACACAAATGGTTCTGTTTCAAATAACATTAACCCTTACCAACCTGCTGTTACTAATGAATATCACATGTTGGAATCAAATCATTCATGGGGTGCTTCTCAATTCAATGTTGCACCAAACTACAATCAATCATTTGTGGAAAATAACAACAATGTGCTACAACCTCATGGTATGAATTTTGGAGGTTATGGAAATCAATATAATTCTTATCAGTTGTTTCCTGGTCCTGGTGATAGGTTGATGAGGTTAGGTCCTTCTGCTACAAAAGAAGCTAGAAAGAAGAGGATGGCTCGGCAACGGCGGTTTATGTCTCATCATAGGCATCATAATATTAACCATCATCAGAATATTCAAGGTTCTGATCCACTTGCGAGATTAGGTAGTGGTGATAGTTGCACCAATGTTGCTGCTGGTGGTTCTCATGCAAATCCAGCGAACTGGATGTATTGGCAGACTATGACCGGTGGGACAGCAGCCTCCTTGGCACCTGTTGTTCCGGCTGAGCCGACGCAGCCTCCAGTGGACCGTGACCGCCCCACCATGCAGACACAGAGTTCTCACCAGGGTCGAAGTGCATCCGATAGGAGACAGGGTTGGAAGCCAGAAAAGAACTTGAGGTTCCTTCTACAAAAGGTTTTGAAGCAAAGTGATGTCGGAAGTCTGGGGAGAATTGTTTTGCCAAAAAAAGAGGCAGAAACACATTTGCCAGAATTGGAGGCAAGAGATGGAATTTCGATTACAATGGAAGACATTGGAACTTCTCGAGTTTGGAATATGCGTTATAGATATTGGCCTAACAACAAAAGCAGGATGTATTTGCTGGAGAACACCGGTGATTTTGTGAAAGCTAATGGACTCCAAGAAGGAGATTTCATAGTGATATATTCTGATGTGAAGTGTGGCAAATTTATGATAAGGGGAGTTAAAGTGAGGCAACAAGGAACAAAACCAGAGGCAAAAAAAGCAGGAAAATCACAGAAAAACCAGCATGGGAATAATGCTGCAAATTTAGCTGGAACTGCAGTGGATAATAATGGCACGCCATCTTCACCAAAGAGAAAAAAATGA
Protein Sequence:
  • >Medtr7g059330.1|Medicago_truncatula|B3|Medtr7g059330.1
    MECGLDLHAKLVNETEQVGFGNLAEENWLNNTTNDQDGDLLGMNMNDDASMFYADFPPLPDFPCMSSSSSSSSSSTPLKTIACTSTTTTTTSSSSSASSSSAASWAVLKSDVEVDHQGYQKHGHPLDYHHGHPPTTLSSTASMEISQQQQQDLGVSNNDVVVGGGDCMDDVNIMDTFGYMELLEANEFFDPASIFQNEDENPLVDFTQEQQVQVQDGYQQHQQVPMIVHDDRENKPQQVNIEENNDDVFVCDGVNGEESIQGDELGACDGVSDEMSMVFLEWLKSNKDSVSANDLRNVKLKKSTIESAARRLGGGKEGMKQLLKLILEWVQTSHLHNKRLKENANTNTIIPSNIVPQQHHFQDPCQNQNTANTFAPESNACFNQTSWLDQTPLIVPPQQFSQPMVGVGVGFVADPYTNGSVSNNINPYQPAVTNEYHMLESNHSWGASQFNVAPNYNQSFVENNNNVLQPHGMNFGGYGNQYNSYQLFPGPGDRLMRLGPSATKEARKKRMARQRRFMSHHRHHNINHHQNIQGSDPLARLGSGDSCTNVAAGGSHANPANWMYWQTMTGGTAASLAPVVPAEPTQPPVDRDRPTMQTQSSHQGRSASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQGTKPEAKKAGKSQKNQHGNNAANLAGTAVDNNGTPSSPKRKK*