Information report for MDP0000312598
Gene Details
|
|
Functional Annotation
- Refseq: XP_009365641.1 — PREDICTED: uncharacterized protein LOC103955467
- TrEMBL: A0A498HU68 — A0A498HU68_MALDO; Uncharacterized protein
- STRING: XP_008378464.1 — (Malus domestica)
- GO:0003677 — Molecular Function — DNA binding
- GO:0003824 — Molecular Function — catalytic activity
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_30427
- Cucumis melo: MELO3C018249P1
- Cucumis sativus: Cucsa.341840.1
- Fragaria vesca: mrna15053.1-v1.0-hybrid
- Glycine max: Glyma.14G079200.1.p, Glyma.17G245900.1.p
- Juglans regia: WALNUT_00009674-RA
- Manihot esculenta: Manes.05G168900.2.p, Manes.05G168900.1.p, Manes.05G168900.4.p, Manes.05G168900.3.p
- Prunus mume: XP_008220724.1
- Prunus persica: Prupe.1G388200.1.p, Prupe.1G388200.2.p
- Pyrus bretschneideri: Pbr020043.1, Pbr006217.1
- Vitis vinifera: GSVIVT01009586001
- Ziziphus jujuba: XP_015884739.1
Sequences
CDS Sequence:
- >MDP0000312598|Malus_domestica|B3|MDP0000312598
ATGCATCTTTCAGTATGGAAGCCAATATCTCACTGTGCAGCACTACTAATGGAGAAGAAGACCAGGAGGAGGAGAGACGACGGTTCTGGTTTGGCCGTCGACGCCAAGCGGAAGCCGTCAGTTCTCCGGCAGCTGCAAGAAAACAGGCTCCGGGAGGCTCTTGAGGAGGCGTCAGAAGATGGGTCGCTTTCCAAATCCCAAGACATTGATTCTGATCAGACCCCAAATCAAGACGGCAGCTTTGGACGGTCGAGATCCCTTGCCAGGCTCCACGCCCAGAAGGAGTTTCTGCGCGCGACGGCGCTCGCGGCGGACCGGACATTCTCCACAGATGATTCAATTCCTCACCTCCGTGAAGCCTTCAACAAGTTCCTCACAATGTACCCAAAGTTCCAGTCTTCTGAAAAGATTGACCATTTGAGGGCAGAGGAGTACAATCACCTCTCTGAATCGCTTGCAAGGGTATGTCTTGATTACTGCGGTTTCGGGTTGTTTTCGAATCTTCAAGCTCAACTGTATTGGGAAACATGTTCGTTTACATTGTCGGAAATAACTGCAAATTTGAGTAACCATGCTCTCTACGGAGGTGCTGAGACAGGCTGTGTTGAACATGACATAAAAACTAGGATTATGGATTACTTGAACATCCCCGAACACGAATATGGTCTTGTTTTTACTGTCAGTAGAGGGTCTGCATTTAAATTGCTAGCTGAATCTTACCCTTTCGGCACAAATAAGAAGTTGTTGACAATGTTTGATCATGAGAGCCAGTCTGTGAACTGGATGGCGCAGAAGGCGAAAGAGAAAGGTGCTAAGGTTTATAGCTCATGGTTTAAATGGCCAACATTGAAGCTTTGCTCTAGGGAGCTGAAGAAGCAGATTGCAAACAAGAGGAGGAGGAAGAAGGATTCTGCAACCGGGCTCTTTGTGTTTCCGGTTCAGTCAAGAGTGACTGGGGCCAAGTATTCGTATCAGTGGATGGCACTTGCTCAGCAGAACAATTGGCATGTTTTGCTTGATGCCGGGTCATTGGGTCCTAAAGACATGGATTCACTAGGGTTGTCGCTCTTTCGCCCAGATTTCATTATTACATCATTTTACAGGGTTTTTGGGTCTGACCCAACTGGATTTGGTTGTCTTCTGATCAAGAAATCTGTAATGGCGAGCCTGCAAAGTCAAGGTGGGCGGACTGGTACTGGAATTGTGAGGATTCTTCCTGTTTTTCCTCAGTACCTGAGTGACTCTGTGGATGGTCTTGATGGATTAGGTGGAATTGAGAATGATGCGGTCCACAGTAACAAAGAATTAGTGCCTGAAACGCATGGGGGGTCTCATATGCCTGCTTTTTCGGGTGTGTTCACTTCCAATCAGGTGAGGGATTGCTTTGAGACAGAGATGGATCAGGACTCCGACAGGGATGGAAGCACCATATTTGAAGAAGCTGAAAGCATTTCGATTGGGGAGGTTATGAAGAGTCCAATCATCAGTGAGGATGAGTCATCAGACAATTCATACTGGATTGATTTGGGTCAGAGCCCATTCGGTTCTGATCATTCTGACCAACATATGAGACAGAAAACAGGTTCGCCCTTACCACCAACGTGGTTTTCTGGGAGGAAAATCAACAAGTTTTTCTCTCCGAAAGTGACACCAAAATCGCCAAAGAGCCCAATATATGATGATGATGATAAGAGAGCACACCTCAGACTGCATGGAGATCCTGTTTTGTCTTTCGATGCTGCTGTATTATCGGTGTCACATGAGCCGGACCATGCTAAGGGAATTCCTGAAGGAGACCTATTTGCTGAAACCGACGCTGCCTCAGGAAATGATAGGGAGGTTCAAGAAGAACCCGAAATCAGGGAAGATTCAATGGCCAACAATTCTAGGTTGCTTTCTACCGAAGATGGATTTAGGCCAAACAATCAGACTTCTGGTCTTAAACACAGTAACTTTGAGCTTTCCTCAACCTCCGAAATTTGCCAAGAATCAAAAGACAGTGCTATCAGGAGAGAGACAGAGGGTGACTTCAGACTTCTGGGAAGAAGGGAAACAAAGGTATTTTCTGGTCGTAGATTTTTCGGTTTAGAAGAAGGTGATCGAGAGCTAAGCATGGGTCACAGGGTGTCTTTTACCATAGAAGACAACCACAGAGGAAAATCGAGCCTTATATCGGAGCCTGGAGAAACATCCATGACTACCCTTGGTGACGATGAGTTTATGAGTGAAGGAGAATATGGCGATGAGCAGGAGTGGGGAAGGCGGGAGCCTGAGATAGTTTGCCGGTGTCTTGATCATGTTAATATGTTAGGCCTGAACAAAACTACCCTCAGACTTCGATATCTCATCAATTGGCTAGTCACCTCGCTGCTTCAACTTCGGTTACCTGGTTCCGATGAAGGTTTAGAAGTGCCTCTCGTGCAGATATATGGTCCTAAGATCAAATACGAAAGGGGTGCCGCTGTAGCTTTTAATGTCAGACAGGGCAGCGGCAGAGGGCTAGTTCACCCCGAAGTCATACAAAAATTGGCTGAAAAGAATGGTATATCTCTCGGCGTTGGCATCCTTAGTCATGTTCGAATTGTGGATGGCCCAAAGCAGCAGCATTGCGGGGGACTTGATCTGGCAGACACATCGTTGTGCAAGCCAATGGTTAACGGGCGCCAAGGCGGTAAGAACATGTTCTTTAGGGTCGAAGTTGTGACAGCATCGCTCGGATTCTTGACCAACTTTGAAGATGTATACAAGATGTGGGCTTTTGTTGCCAAGTTTCTCGATTCGTCGTTTGCTGAAGTCGAAGGGGATGAATTACCTCCAGTACCGGAGGAATCCGAAACCACTTTTTGGGATACTGGGATGTCAAAAGAGTATCCACCTGCCTCCGGTGTAGTTGCCAACAGGACGGCAACTTCCTCTAAGGCGCAGAGCTATAAGCATCGTCAATGTTCCATAGGAAAAGGGCTTTTGAAAACAACAAAATGGTTAACGTCGAGGAAGCAGTCCAAGAGAAAAATGGCAAAGACCCATGGGTTTGTTAACAAGGCTTATGTAACTATTCCTGCACCGTTTGCAAGAGAAAACGGCCTCCGTGCGGAAGATTGTGGCCGAGACTTCGCGAAGTCACGCGACATCGGCGGGCGTGAAACCACGCTGCATGTCCTCCAACGAGCTCTTGGAGGAAAGCTAATTTCAATGGCAGAGGAAGCTCGGAATGTGAGGAGCCCTCATTTTTTTGCGTTTTATTCTGCTGATTTGAGCTCTGAAAGACTGAAAATCCCAGAAAGATTCATGAGACACATGGAAGGCAGAACATCTGGGTTAGTTTCGTTGTTCGGCCCTAGCGGCAGTGAATGGAGTGTTGAATTGATTCAACAGAATGGTGGTTTGTTCTTGCATCGTGGGTGGCCGGCATTTGTGAGAGACCATTATGTGGAATGCGGGGACTTCTTGATTTTTAGATACGATGGTGATTTGTGTTTCACCGTGCTAATTTTTGATCAAAGTGCATGTGAGAAAGAGGCTGCATTTCGTTTTGGATACGGGCAAGACTCCAGGAACTTTGACAAGTATATGTATATGGGACGAAAAAGGAGAAGGGAGGAGGTCGCATCATCTGGGAATAAGCTGGTTGATGGTGCGGTGAAGAAGATTAGAAACGGTTCGTCTCAATTCCGGTCAGAATGCATTGATGAGGGTCGAGAAGAAGCAACTTGTTCCACAGAAAAAAATCCACTTGAGAATCCTGGTTTGGATGTTGTTTCATATAAAGCGAAGGAATCGATCCAAAATATGTGTGGAAAAGGAGATGGATTAAATGTTAATGGTAGACTTTGTATGCAGATGTCATCAGCACATGAAGTAGCTCCATCATTTAGCTCCTCTAATCCTTATTTCGTGAGAATCATAAAAAGTTTCAACATCAGTGGTTCATATACTCTGATGGAATTAACCACAATCACCCAGAGGTTGTGCCCGTGGTTCCTCATTCCGTCGTTCAGGTTTGGGGTTTGGAAAATGTCCACGAATATCCCATATAAATTTTCAGTGGCACATTTACCAAACTGCAAAGTAAAGATTGTCCTTCAAAATTGGAAAGGAGAAAGTTGGACTGTCAATTCTGTGCCAAGTAATAGAGTGCATACCAGTCACACTCTTTGTGGAGGATGGATGGCGTTTGTTCGTTATAATGACATACAGCTGGGAGATATCTGCACTTTTGAACTTGTGCGTGAGTTTGAATTCTGTGTCCACATTCAAAAGGGAGAAACATCTAGTTGGTTAAGTCCGGGGCTAGCTGTCACTACGCATAAAACTATCAAAGGCTTGTCAAAGAAAATGAAAGGGAACTCTCCCAAAGTCCTTTCAAAGAGCATAAGAGAGATAGCTGATAAACTATCATCAAAGAAGGATCAAGACGCTGCTTTCATTAATGACACAAGGAAATATGGCAGCACATCAAGATCTCTTACTAAAGCTGCACTCGCTCAGTCAAAAGTTGCTAGTAAAAAGTTGGTTAATCGCAGGAAAAAAGTTGTTGATGATGAACTGGATTCAAAATCAAGTGGTTTGAGAATCAAGTTAACACTTGATGAAGAAAGAATAGCTCGATCTTTCACTTCTTGTTTCCCGAATTTTGTGAAAATCATGAAGAAGTTCAACATCAGTGGATCTTATACATTGACGATTCCGAAGCATGTAGCCCGAGCTCGAGGACTAGTAAGCGTTGCAGGGCTTCCGAGTGGCGAGACTAACGCTTCAAGATCTGACCGGAAGATCGTGGCCTGCTCAACTTCATGTCAGGGCAGATCACCGTCTGCAGATGGCGCGGGGATGTGGTGGCAACATCTGCTAGCCTGTTTAGGGTTTGAGGTTGCAATTGGATTGTCATCCTTCTCCGAAAAGAAGGCATTTTTGCAGACAAACGACTGCGTGACGGAAGAACTAAACGACCATGCTTTTGCAGACACTGTCAAACCCAAATATTTTGAATGGAACCGAAAAACAAACAGATTTCGTGCACCCTGA
Protein Sequence:
- >MDP0000312598|Malus_domestica|B3|MDP0000312598
MHLSVWKPISHCAALLMEKKTRRRRDDGSGLAVDAKRKPSVLRQLQENRLREALEEASEDGSLSKSQDIDSDQTPNQDGSFGRSRSLARLHAQKEFLRATALAADRTFSTDDSIPHLREAFNKFLTMYPKFQSSEKIDHLRAEEYNHLSESLARVCLDYCGFGLFSNLQAQLYWETCSFTLSEITANLSNHALYGGAETGCVEHDIKTRIMDYLNIPEHEYGLVFTVSRGSAFKLLAESYPFGTNKKLLTMFDHESQSVNWMAQKAKEKGAKVYSSWFKWPTLKLCSRELKKQIANKRRRKKDSATGLFVFPVQSRVTGAKYSYQWMALAQQNNWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGSDPTGFGCLLIKKSVMASLQSQGGRTGTGIVRILPVFPQYLSDSVDGLDGLGGIENDAVHSNKELVPETHGGSHMPAFSGVFTSNQVRDCFETEMDQDSDRDGSTIFEEAESISIGEVMKSPIISEDESSDNSYWIDLGQSPFGSDHSDQHMRQKTGSPLPPTWFSGRKINKFFSPKVTPKSPKSPIYDDDDKRAHLRLHGDPVLSFDAAVLSVSHEPDHAKGIPEGDLFAETDAASGNDREVQEEPEIREDSMANNSRLLSTEDGFRPNNQTSGLKHSNFELSSTSEICQESKDSAIRRETEGDFRLLGRRETKVFSGRRFFGLEEGDRELSMGHRVSFTIEDNHRGKSSLISEPGETSMTTLGDDEFMSEGEYGDEQEWGRREPEIVCRCLDHVNMLGLNKTTLRLRYLINWLVTSLLQLRLPGSDEGLEVPLVQIYGPKIKYERGAAVAFNVRQGSGRGLVHPEVIQKLAEKNGISLGVGILSHVRIVDGPKQQHCGGLDLADTSLCKPMVNGRQGGKNMFFRVEVVTASLGFLTNFEDVYKMWAFVAKFLDSSFAEVEGDELPPVPEESETTFWDTGMSKEYPPASGVVANRTATSSKAQSYKHRQCSIGKGLLKTTKWLTSRKQSKRKMAKTHGFVNKAYVTIPAPFARENGLRAEDCGRDFAKSRDIGGRETTLHVLQRALGGKLISMAEEARNVRSPHFFAFYSADLSSERLKIPERFMRHMEGRTSGLVSLFGPSGSEWSVELIQQNGGLFLHRGWPAFVRDHYVECGDFLIFRYDGDLCFTVLIFDQSACEKEAAFRFGYGQDSRNFDKYMYMGRKRRREEVASSGNKLVDGAVKKIRNGSSQFRSECIDEGREEATCSTEKNPLENPGLDVVSYKAKESIQNMCGKGDGLNVNGRLCMQMSSAHEVAPSFSSSNPYFVRIIKSFNISGSYTLMELTTITQRLCPWFLIPSFRFGVWKMSTNIPYKFSVAHLPNCKVKIVLQNWKGESWTVNSVPSNRVHTSHTLCGGWMAFVRYNDIQLGDICTFELVREFEFCVHIQKGETSSWLSPGLAVTTHKTIKGLSKKMKGNSPKVLSKSIREIADKLSSKKDQDAAFINDTRKYGSTSRSLTKAALAQSKVASKKLVNRRKKVVDDELDSKSSGLRIKLTLDEERIARSFTSCFPNFVKIMKKFNISGSYTLTIPKHVARARGLVSVAGLPSGETNASRSDRKIVACSTSCQGRSPSADGAGMWWQHLLACLGFEVAIGLSSFSEKKAFLQTNDCVTEELNDHAFADTVKPKYFEWNRKTNRFRAP