Information report for MDP0000309874
Gene Details
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Functional Annotation
- Refseq: XP_009365641.1 — PREDICTED: uncharacterized protein LOC103955467
- TrEMBL: A0A498J6W4 — A0A498J6W4_MALDO; Uncharacterized protein
- STRING: XP_008377375.1 — (Malus domestica)
- GO:0003677 — Molecular Function — DNA binding
- GO:0003824 — Molecular Function — catalytic activity
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Fragaria vesca: mrna19367.1-v1.0-hybrid, mrna19375.1-v1.0-hybrid
- Manihot esculenta: Manes.18G025500.1.p
- Nicotiana benthamiana: Niben101Scf01784g07015.1, Niben101Scf01859g09005.1
- Nicotiana tabacum: XP_016435166.1
- Prunus mume: XP_016646952.1
- Prunus persica: Prupe.1G517200.1.p
- Pyrus bretschneideri: Pbr006217.1, Pbr006218.1
- Ricinus communis: 30170.m014218
- Salvia miltiorrhiza: SMil_00016222-RA_Salv
- Sesamum indicum: XP_011075721.1, XP_011088089.1
- Solanum lycopersicum: Solyc04g064830.2.1
- Solanum tuberosum: PGSC0003DMP400043067
Sequences
CDS Sequence:
- >MDP0000309874|Malus_domestica|B3|MDP0000309874
ATGCATCTTTCAGTATGGAAGCCCATATCCCACTGTGCAGCTCTACTAATGGAGAAGAAGACCAGGAGGAGGAGAGACAACGGTTCTGGTTTGGCGGTCGACGCCAAGCGGAAGCCGTCGGTTCTCCGGCAGCTGCAAGAAAATAGGCTTCGGGAGGCTCTTGAGGAGGCGTCAGAAGATGGGTTGCTTTCCAAATCCCAAGACATTGATTCTGACCAGACCCCAAATCAAGACGGCAGCTTTGGACGGTCTAGATCCCTTGCCAGACTCCACGCTCAGAAGGAGTTTCTGCGCGCGACGGCGCTTGYGGCGGACCGGACATTCTCCACGGAGGATTCAATCCCTCACCTCCGTGAAGCCTTCAACAAGTTCCTCACAATGTACCCAAAATTCCAGTCTACTGAAAAGATTGATCATGTGAGGGCAGAGGAGTACAGTCACCTCTCTGAATCGCTTGCGAAGGTATGTCTTGATTACTGCGGTTTCGGGTTGTTTTCGAATCTTCAAACTCAACTGTATTGGGAAACATGTTCGTTTACATTGTCGGAAATAACTGCGAATTTGAGYAACCATGCTCTYTATGGAGGTGCTGAGACAGGCTGTGTTGAACACGACATAAAAACTAGGATTATGGATTACTTGAACATYCCCGAAAACGAATATGGTCTTGTTTTTACTGTCAGTAGAGGGTCTGCATTTAAATTGCTAGCTGAATCTTACCCTTTCGGCACGAATAAGAAGCTGTTGACAATGTTTGATCATGAGAGCCAGTCTGTGAACTGGATGGCGCAGAAGGCGAAAGAGAAAGGTGCCAAGKTTTATAGCTCCTGGTTTAAGTGGCCAACATTGAAGCTTTGCTCTAGGGAGCTGAAGAAGCAGATTGCAAACAAGAAGAGGAGGAAGAAGGATTCTGCAACCGGGCTCTTTGTGTTTCCRGTTCAGTCAAGAGTGACTGGGGCGAAGTATTCGTATCAGTGGATGGCACTTGCTCAGCAGAACAATTGGCATGTTTTGCTTGATGCCGGGTCRTTGGGTCCTAAAGACATGGATTCACTAGGGCTGTCGCTSTTTCGCCCGGATTTCATTATTACATCATTTTACAGGGTGTTTGGGTCCGACCCAACTGGATTTGGTTGTCTTTTGATTAAGAAATCTGTAATGGCGAGCCTGCAAAGTCAAGGYGGGCGGACTGGGACTGGAATTGTGAGGATTCTTCCGGTTTTTCCTCAGTGCCTGAGTGATTCTGTGGATGGTCTTGATGGATTGGGTGGAATTGAGAATGATGCAGTCAACTGTAATGAAGAATTAGTGCCTGAAACAAATGGGGAGTCTCATATGCCTGCTTTTTCGGGTGTGTTTACGTCCAATCAGGTGAGGGACTGCTTTGAGACAGAGATGGATCAGGACTCGGACAGGGATGGTGCAAGCACCATATTTGAAGAAGCGGAGAGCATTTCGATTGGGGAGGTTATGAAGAGTCCAATCTTCAGTGAGGATGAGTCATCAGACAATTCATACTGGATTGATTTGGGTCAGAGTCCATTCGGTTCTGATCTTTCCGACCAACACACAAGACAGAAAACAGGTTCGCCCTTGCCACCAACATGGTTTTCTGGGAGGAAAATCAACAAGATTTTCTCTCCGAAAGTAACACCAAAGCCTCCAAAGAGCCCAATATATGATGATGATAAGAGGGCAAACCTCAGAGTGCATGAAGATCCTGGTTTGTCTTTCGATGCTGCTGTGTTATCGGTGTCACATGAGCCGGACCGTGTTAAGGGAATTCCTGAAGAAGAGATGTTTGCTGAAACAGATGCCGCCTCACGAAAYGGTAGGGAGATTCCAGAAGAACCTGAAATCCGGGAAGATTTAATGGCCAACAATTCTAAGCTGCTTYCTRCTGAAGATGGATTCAGGSTGAACRATCAGACTYCYGGTCTTAAACACAATAACTTTGAGAATTCCTCAACCTCCGAAATTTGCCAAGAATCAAAAGATAGTGCCATCAGGAGAGAGACAGAGGGTGACTTYAGACTTCTGGGAAGAAGGGAAACAAAGAGATTTTCTGGTGGTAGATTTTTCGGTTTAGAAGAAGGTGATCGAGAGCCAAGCATGGGTCACAGGTTGTCTTTTACCATAGAAGACGACCACAGAGGAAAATCGAGCCTTATTTTGGAGCCTGGAGAAACATCCATGACTATCCTGGGGGACGATGAGTTCATGAGTGAAGGAGAATATGGCGATGAGCAGGAGTGGGAAAGGCGGGAGCCTGAGATAGTTTGCCGTTATCTTGATCATGTCAACATGTTAGGCCTGAACAAAACTACCCTCAGACTGCGATATCTCATCAATTGGCTAGTCACCTCRCTACTTCAACTYCGGTTACCTGGTTCACAYGAAGGCGCAGAAGTGSCTCTTGTGCAGATATATGGTCCTAAGATCAAATACGAAAGGGGTGCCGCTGTGGCTTTTAATGTCAGGCGAAGCRGCGGAAGGSGGYTAGTTCACCCYGAAGTYGTACAAAGATTGGCTGAAAAGAATGGCATATCTCTCGGCGTTGGCATCCTTAGCCATGTCCGAATTGTGGATGGCCCAAAGCAGCAACATTGCGGGGCACTTGATCAGGCAGACACATCTTTGTGCAAGCCAATGGTTAACGGGCGCCAAGGCGGTAAGAACATGTTCTTCMGGGTCGAAGTTGTGACAGCATCGCTCGGATTCTTGACCAACTTTGAAGATGTATATAAGATGTGGGCTTTTGTTGCCAAGTTTCTCGATTCGTCGTTTGCTGAAGTCGAACGGGATGAATTACCGTCGTTAGWGGAGGAGTCCGAAACTACGAACTCAAAGTACAAGCTCCAGCCAATGGCATCCATGGACTCTCAACCACTTTACTGCGACCCAGAGCTGCGCTGGAGAGCTGCCATTGGCCCTTCAATGTTATATAAACATAAACATTGCATTCAGCTGCGACTTCCACCAGCTTTCTGTAGAAGTCTGAGTGGAAAGAAACCAAAAACAGCACTTATTAAAAGCTGTTTGGGATACTGGGGTGTCAAAGTCGGTAGGAGCGGTGATGGAAACCTTGCTTTTGAAGAAGGTTGGGAAGAGTTTGCGAAGTGTAATGGCTTAAAAGAAGCGGACAATGCAGTTTTTGAACACAAAGGAGACATGGCCTTCAACATGGTTGCCTATGACTCTGGCGGCTGTGAAAAAGAGTATCCACCTGATTCCGGTGTAGCTGCCAACAGGATGGCAACTTCCTCTAAGGCTCGGAACAATAAGCATCATCGCGGTTCCAAAGGAAAAGGGCTTTTGAAAACAACAAAATGGTTAACGTCGAGGAAACAGTTCAAGATAAAAATGGCAAAAAGCCATGGGTGCGTTAGCAAGGGCTATGTGCATGCTTTCAATAGAGCCCTAGGCGGAGTTGTAAAGTGTGCAGGAGTTTCATTTTCTTTTCGGATTCTTTCTCAATCTGGCGAGCGCTTATGGCAGACTACTCCTGCACGGTTTGCAAGAGAAAACGGCCTTCATAGCATATCGAAATTGATTCTCAATGATCCGCGTGGAAGATTATGGCCGCTGAGCCTAGGTCGTTGGGGAAGCAGAGTGAAGGCTGCTGATCATCGTCTAGCCATAAAAGCAAGGGGATGGTGCAAGTTCTATGCATCCAACGGTCTCAAGGAAGGTGATGTCTGCTTATTCAAGCTCAAACGGATGTCCAGGTCGATTTCAACAGCTTTCATGGACGTCGAGATAACGCGCCGGAGATCGTAA
Protein Sequence:
- >MDP0000309874|Malus_domestica|B3|MDP0000309874
MHLSVWKPISHCAALLMEKKTRRRRDNGSGLAVDAKRKPSVLRQLQENRLREALEEASEDGLLSKSQDIDSDQTPNQDGSFGRSRSLARLHAQKEFLRATALXADRTFSTEDSIPHLREAFNKFLTMYPKFQSTEKIDHVRAEEYSHLSESLAKVCLDYCGFGLFSNLQTQLYWETCSFTLSEITANLSNHALYGGAETGCVEHDIKTRIMDYLNIPENEYGLVFTVSRGSAFKLLAESYPFGTNKKLLTMFDHESQSVNWMAQKAKEKGAKXYSSWFKWPTLKLCSRELKKQIANKKRRKKDSATGLFVFPVQSRVTGAKYSYQWMALAQQNNWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGSDPTGFGCLLIKKSVMASLQSQGGRTGTGIVRILPVFPQCLSDSVDGLDGLGGIENDAVNCNEELVPETNGESHMPAFSGVFTSNQVRDCFETEMDQDSDRDGASTIFEEAESISIGEVMKSPIFSEDESSDNSYWIDLGQSPFGSDLSDQHTRQKTGSPLPPTWFSGRKINKIFSPKVTPKPPKSPIYDDDKRANLRVHEDPGLSFDAAVLSVSHEPDRVKGIPEEEMFAETDAASRNGREIPEEPEIREDLMANNSKLLXXEDGFRXNXQTXGLKHNNFENSSTSEICQESKDSAIRRETEGDFRLLGRRETKRFSGGRFFGLEEGDREPSMGHRLSFTIEDDHRGKSSLILEPGETSMTILGDDEFMSEGEYGDEQEWERREPEIVCRYLDHVNMLGLNKTTLRLRYLINWLVTSLLQLRLPGSHEGAEVXLVQIYGPKIKYERGAAVAFNVRRSXGRXXVHPEVVQRLAEKNGISLGVGILSHVRIVDGPKQQHCGALDQADTSLCKPMVNGRQGGKNMFFXVEVVTASLGFLTNFEDVYKMWAFVAKFLDSSFAEVERDELPSLXEESETTNSKYKLQPMASMDSQPLYCDPELRWRAAIGPSMLYKHKHCIQLRLPPAFCRSLSGKKPKTALIKSCLGYWGVKVGRSGDGNLAFEEGWEEFAKCNGLKEADNAVFEHKGDMAFNMVAYDSGGCEKEYPPDSGVAANRMATSSKARNNKHHRGSKGKGLLKTTKWLTSRKQFKIKMAKSHGCVSKGYVHAFNRALGGVVKCAGVSFSFRILSQSGERLWQTTPARFARENGLHSISKLILNDPRGRLWPLSLGRWGSRVKAADHRLAIKARGWCKFYASNGLKEGDVCLFKLKRMSRSISTAFMDVEITRRRS