Information report for MDP0000257606
Gene Details
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Functional Annotation
- GO:0007165 — Biological Process — signal transduction
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0043531 — Molecular Function — ADP binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Gossypium barbadense: Gobar.A11G302700, Gobar.A11G324100
- Gossypium hirsutum: Gohir.D11G297250
- Prunus mume: XP_008243867.2
- Prunus persica: Prupe.3G083400.1.p
- Pyrus bretschneideri: Pbr005643.1, Pbr019198.1, Pbr005640.1
Sequences
CDS Sequence:
- >MDP0000257606|Malus_domestica|B3|MDP0000257606
ATGGTTGTGCCCGTTTTTTACCAAGTGGATCCTTCTGATGTCCGCAAAGCAAAGAGGAGCTTTGAGGAAGCTTTTGCCGAGCATGAAGGCCATTCAAACACCGACATGGAAGAGGTGCGGAGGTGGAGGGATGATGTGAAGCTCATTGAGGAAATTGTAAAAGATATTTTTCAGAAATTGATCCGCACCTCGTCAAGTAAAGACGATGACTTGGTTGAAATGGATTCCCACATGCATGAAATGGACTTGCTATTACATCCTGCTCCTCAAATGGACGACGAAGARTTCTCCRCTTGTGGTGCCGTACATATGCAGGAAAARTTTCTCTCTAGAATCYTGAATGAAAAGGTGCAGAGTTTAGGCACWTTRGATCGAGGTTACAGAATGATTTTGAAAAGGYTACAGMTGAAAAAGGTTTTGATTGTTCTTGATGATGTTGACGACTTMTTTCAAATTGAAACCTTACTTGGAAAGCAACATTCATTTGGTGGTGGGAGTAGAATCATTATCACCACTAGAGATAAGCTAGTACTAAGTSGAGCTGATGCGATCTACAGCCCCAAGGTTCTAAGTGGTGRTGGAGCTTTGGARCTCTTTAGCCAGTATGCCTTCMGAACAAAGCAACCCAAAAGAGACTATGACCATCTCTCAAGCCGTGCTGTACGATATGCTCAAGGTCTCCCTTTAGCACTTAAAGTCTTGGGGGCTTTTCTTTATAACAAATCTRTACAGGAGTGGGAAGAGGTGCTAGAGAAATTAAAGAAAATCCCGCARAGGGGAATTCATGATGTGCTAAGAACAAGCTTCGATGGACTAGATGATTCTGAGAAGGACATATTTCTGGATATTGCATGTTTCTTTAAAGGAGCGGAAAAAGACAACGCAACAAAGGCTACGGAAGCTGTTGAAAGTATAATCCTTGACCCTTCATTCTCAAAACCAGAAGTGGTATACTTAAGTTCCGAAGCTTTTGTTAAAATGACGAAATTAAGATTGCTCAAAATCCATTGCGACAGTGGATATTCATGTGAGAATTTAAAGTTTCTTCCGCATGAGTTAAGAAGTCTCATATGGAAGCATTTTCCCCTAAAGTCTTTACCGTCCAATTTTATTGCGAAGAATCTTGTTGAGCTTGACATGCAAAATAGTCTCATTGAACATCTTTGGGAAGGAGCCAAGCCTCTGGAAAATTTGAAAATTATCAACTTAACAAGTTCTCCTCACCTGAAGAAAACTCCAGACTTCACGGAGGCGAAAAATCTGGAGAAAGTAGTTTTTCGAAGTTGTACAAGTTTACTTGAGGTTCACCCATCCATTTCATCTCTCGAAAACCTGGTTCTTTTGGATTTCGAAAATTGTGGAAATCTTAAGATTTTTCCAAGCAGGATTGGTATGAAATCTCTTAGAACCCTTACACTTTCAGGGTGCGAAAACCTCGAGAAGTTTCCCGAAGTTTCAGATGTTATGCAGGATCTATCAGTGCTTTATTTAAATTCTGCTGGAATTAAAGAACTGCCCTCGTCAATTAGTAATCTTACGGGGCTTCTTGTCTTGAATATAAATGGTTGCAGAAATCTTGAGGGATTTTGCAGAGATCACTATCCATTGACAATGCCCGAGATGGAAGAAACCGATGAAGATGATGATTCCGGCAATAGTTCTTGGGATGATGATGAGGACTCTGATTGTGTTGAAGTCTTGGATAACATCATAGGAAAAGCTGCTGTAGCTATTCGGAGAGCTACTGCTTTCAAATCTGACAACCCTTCTTTCATAGTTCCCATGAAGCGCAATATCAATGGATATTCTGTGTGGCTGCCTTCAAAATTGTGTATCCACATGAGGCGTCTTGGTAAGCATTCTGGTGCCGTTATCCTTCGGGTTTTGGATGGGAGAACTTGGTCTGTTGAAATGAAATGTGAAATCGCAACCAGACCAAAACTCAGATTGCAGTATGGTTGGACTGAATTTGTAAGAGGCAATAATTTGGAAGTTGGTGATGTGTACGTGCTTGTGTTGATAGATGACACTAAACTTGTGTTTGAAGTTGTCATTTTTCGCGCCACAGGAACTGCACATACATTCTCACCACCAGATGTTGACGGGGAACAAACAATGTCCCAAACGGAAGAAACTGATGAAGATGATGATTCCATTGAAATCTTGGACAATTTCCCAAGATGCTCGAAAACAAAGAAGAAATCACCGACAGCACCACAGCCTCACAAGAAAAACAGAACATGTTCAGTTAGCACAGCAGAAAATCGCATAAAGAAATTTGGTGGCTCGTCTTTGACTRAAAAAATAATGAACCGAAGAACTCTTCAATATTTGGGAGCCAAGTTTACCAAGGAACACTTTCTTAAGCGGAATTATCATCAAGTAATCCTTCGTGTTTCGGATGGAAGAACTTGGCCTGTCAAATTAAGCAAACGTCAGAAAAACATGGTCCGACTCCAGAATGGTTGGATTACATTTGTGCAAGACAGTCATTTGGAAATTGGTGATGTGTGTGTATTTGCGTTGATTAACAACATCAAGGGTTTAATGGATGTTGTTATTTTCCACACTACAGAAGCTGCACGTTGCAACGTGTCACAAGACGGGGAAAAACCAATGTCCCAAACTGAAGAAACTGATGAAGATGATGATTGTGTTGAAATCTTGGACGATTCTCCACCATGCCTGAAAACAAAGAAAAACAGAGTGGGTTCCATTAGCACTTCAGAAACCCACATGAAGAAATTTGGTGGCTCGTCTTGGACTAAAGAATTAGTAAAACGAAGACCTGATCAGAATTTGGAAGCTAAGTTTGCCCRGGAACATCTTCTAAACAGGACTCATGATAATGTGATTCTTCGTGTTTCGGGTGGAAGAACTTGGCCTGTCAAATTACACCAATATAGCAAAACTGTACTGAAATTCCAGAGTGGCTGGATGACATTTGTGCAAGACAATGGTCTGGAAATCGGTGATTCATTTTCCGCGGTAGAGAAACYGCTGATTGCACCTTTTCACCRGGTGAGCAAGTTTTCTGTTGGTTGTGAGTTTCTTTCTGCTCCATCAGTTATGAGATATGTTGTCTTTGTGCTTAACCTTAACTTAGGTGGAACGGGTTCAYTGTCACCYTGGACTYGCGAGCCACTTATACAAGGCAATGTAACGAGYCTTGCACATGACCTTGAGTGA
Protein Sequence:
- >MDP0000257606|Malus_domestica|B3|MDP0000257606
MVVPVFYQVDPSDVRKAKRSFEEAFAEHEGHSNTDMEEVRRWRDDVKLIEEIVKDIFQKLIRTSSSKDDDLVEMDSHMHEMDLLLHPAPQMDDEEFSXCGAVHMQEKFLSRIXNEKVQSLGTLDRGYRMILKRXQXKKVLIVLDDVDDXFQIETLLGKQHSFGGGSRIIITTRDKLVLSXADAIYSPKVLSGXGALELFSQYAFXTKQPKRDYDHLSSRAVRYAQGLPLALKVLGAFLYNKSXQEWEEVLEKLKKIPQRGIHDVLRTSFDGLDDSEKDIFLDIACFFKGAEKDNATKATEAVESIILDPSFSKPEVVYLSSEAFVKMTKLRLLKIHCDSGYSCENLKFLPHELRSLIWKHFPLKSLPSNFIAKNLVELDMQNSLIEHLWEGAKPLENLKIINLTSSPHLKKTPDFTEAKNLEKVVFRSCTSLLEVHPSISSLENLVLLDFENCGNLKIFPSRIGMKSLRTLTLSGCENLEKFPEVSDVMQDLSVLYLNSAGIKELPSSISNLTGLLVLNINGCRNLEGFCRDHYPLTMPEMEETDEDDDSGNSSWDDDEDSDCVEVLDNIIGKAAVAIRRATAFKSDNPSFIVPMKRNINGYSVWLPSKLCIHMRRLGKHSGAVILRVLDGRTWSVEMKCEIATRPKLRLQYGWTEFVRGNNLEVGDVYVLVLIDDTKLVFEVVIFRATGTAHTFSPPDVDGEQTMSQTEETDEDDDSIEILDNFPRCSKTKKKSPTAPQPHKKNRTCSVSTAENRIKKFGGSSLTXKIMNRRTLQYLGAKFTKEHFLKRNYHQVILRVSDGRTWPVKLSKRQKNMVRLQNGWITFVQDSHLEIGDVCVFALINNIKGLMDVVIFHTTEAARCNVSQDGEKPMSQTEETDEDDDCVEILDDSPPCLKTKKNRVGSISTSETHMKKFGGSSWTKELVKRRPDQNLEAKFAXEHLLNRTHDNVILRVSGGRTWPVKLHQYSKTVLKFQSGWMTFVQDNGLEIGDSFSAVEKXLIAPFHXVSKFSVGCEFLSAPSVMRYVVFVLNLNLGGTGSXSPWTXEPLIQGNVTSLAHDLE