Information report for MDP0000252727
Gene Details
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Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT2G26390
- Arachis hypogaea: arahy.Tifrunner.gnm1.ann1.K0E5I2
- Fragaria vesca: mrna17107.1-v1.0-hybrid
- Prunus mume: XP_008226603.2, XP_008226602.1, XP_008226826.1, XP_008226600.1, XP_016647391.1
- Prunus persica: Prupe.4G178300.1.p, Prupe.4G206300.1.p, Prupe.4G178200.1.p, Prupe.4G206300.2.p, Prupe.4G178100.2.p, Prupe.4G178100.1.p, Prupe.4G178000.1.p, Prupe.1G388000.2.p, Prupe.1G388000.1.p, Prupe.4G178400.1.p, Prupe.7G064600.1.p
- Pyrus bretschneideri: Pbr017402.6, Pbr038296.1, Pbr038297.1, Pbr006217.1
Sequences
CDS Sequence:
- >MDP0000252727|Malus_domestica|B3|MDP0000252727
ATGGCACGGAAGGGTCCTCGGAAGAAACAATCGTTTTTCAAGGTCCTACTTGGTGACTTCTCTAAGCATCTGCGTATACCGCATGCGTTTCTCAAAAACTTAAGTGGACTATCACTCGGCAAATGCGCTCTTAAGGGCCCTAGTGGAAAACGGTGGATTGTGGAACTGGAAGAGAGAGAGAATGGCTTGTTCTTCTATGCGGCGGGTTGGCAGGATTTTGTGAAGGATCATCTTTTACAAGTGGGGGATTTTCTGGATGTAGAGGAAGCCAACGGGAAGAGTAGCAATCCAGTTTCCTTGGAAAATTATAAAGGAAATCAAGCTAGAGTAAAAGAGGAAATTGTCGAATCTGAAGCTGAAAACTACGATACAGACTGTGAAAACAAAGCAACTATTGCTAACACAAGAAGTGGGAATGCCATGTCTGGAAAGAGACCTACAACTGGTTATGTAAAAGAAACMTCAAGCACATGCTTCACATTCAAATCGGAGAATCCATGTTTCATGGAAACTCTGAAGAAGCATCAAGAATATTGTCTGGTGATTCCAAAGAAACTAGCCATATCTGAAGGTCTTATGAGCATGGGCACTRTAATGCTTCGAAATGAATCCGGAAGAWCATGGTGTGCTAAAGTTATACTTCGTCCCAAGTCATCTTTCCATCGCATGGAATTGACAACAGGTTGGGCAGRATTTTGTAASGCRAACCAGATTTCAGTTGGGGACACTGTCATTTTTGAGTTTGTYAAGCAAAGCGTAATTCAAATTCATGTTTTCAGAGCAGTGAGAGGCAAGAGGGGCGTATGTTTATATGACCTTGGACTATTCCTTGCCAATTGGTTTTACGCCAATTTCATCGCGGCAAACCTCGAARAGCTGAACTACGCCACTCTCTCTACATTCAACAGCGAAACATATAGAGCACCTGCAGCCAGCGACAATGTTCGGATCTCAATCTTCGTCGTCCCTCTTCAGAACGTCCTCGTCCCTCTCCAGAACATCTTCGTTCCTCTTCAGAACGGAGTCGTCGACCCCCGTCTTTGGGAAGCCATTGTCGACCCCAGCCTTCTTCACTCCCTGGACCCGGGCTTTTCGATTCGGCTCCATATTATCGTTTCAAACTCAGCAGCAACAGCAGMGGACATTGTCGCTTCGGCCTGCTGGCGCCTATGCACTTCGGCGTCCATTTTCTACGCATCAAGAGCCAACGCYCTTCCGTYGCTCCTCTCAGATGGCTCCCGTTGCTCCTCTCCCTTTCGYTCTCCCCGGTGGCGATATTCAAGTATGTCGACCAAAGAAACCATCAGCAACGTAAACGATGTCTCACTCGAAATTACTAAGCAGCTGCTCACGACTGAAGGCAAAGRGRAGAACATGGTGTTCTCCCCGCTGTCCATYCAGGTTGTGCTGTGGCTGTTAACGGCCGGGTCAAAGGGTCCCACAAGGGAGCAGTTGCTCGCTTTCCTCAGGTCCAAGTCCACGGACCAACTCAACTCCCTTGCCTCCCATCTTGTCCCTCTCATCTTCACAGACGGKTCTACCAAAGGCGGTCCCTGCCTAAGTTTTGCYAATGGCCTTTGGGTTAAGGATRCTATCCCCATCATACCTTCCTTCAAAGAGGTTGTGGACACTGCTTACAAGGCAGCTATAAAACATGTTAGTTTTGTGAACCCTGAGGAAGTGAGACGTGAAGTGAATTTATGGGCCGAGAAGGCGACGAAAGGCCTTATCACTGAGGCTCTTTCTCCTGGGTYAATTGACCACACCACCACTCTTATATTGTCAAATGCTTTATACTTCAAAGGCCTTYGGAGCAGAAAGTTCGATGCATCGAGAACAATAACGGACAACTTCCACCTTCTCAACGGTACTTCCGTTAWGGCGCCKTTCATGAGAAGCTCCGGAGAACATTTTGTTAGAGCCTTTGACGGCTTCAAAGTCTTGAAGCTTCCTTATTCACARGGTGAAGACAAGGAGCGGCAGTTTTCCATGTACTTGTTGCTGCCAGATGAAAAATATGGTCTCCCAGCTTTGGTCGAGCGAGTTTGTTCCGAGCCTGGTTTCTTAGATCGCCATCRCCCCAGAAGAAGAGYCCCAGTTGGCGAATTCAAAATCCCAAGGTTTAAGATTACCTCCGGCTTTACAGCTTCTGAAATTCTCATGGATTTAGGACTGGTGTTGCCTTTCAATGGTGAMGGTGATTTGACAGAGATGTTGGAATCAGGTRTAGRTAAKGCCAAAATGATTCATAAATCCTTCATTGAAGTYGATGAAGATGGCACAAAAGCTGCAGCTGCTTCTGTTTATTACACACTTATGTGTTCTGCTGGACCGGTTGAACGGATTGAAGAGATAGACTTCGTGGCTGATCACCCATTCCTGCTGTTGATCAGAGAGGAAACGACTGGGACTGTTATGTTCATTGGTCACGTCCTGAATCCGCTTGAAGAATGA
Protein Sequence:
- >MDP0000252727|Malus_domestica|B3|MDP0000252727
MARKGPRKKQSFFKVLLGDFSKHLRIPHAFLKNLSGLSLGKCALKGPSGKRWIVELEERENGLFFYAAGWQDFVKDHLLQVGDFLDVEEANGKSSNPVSLENYKGNQARVKEEIVESEAENYDTDCENKATIANTRSGNAMSGKRPTTGYVKETSSTCFTFKSENPCFMETLKKHQEYCLVIPKKLAISEGLMSMGTXMLRNESGRXWCAKVILRPKSSFHRMELTTGWAXFCXANQISVGDTVIFEFVKQSVIQIHVFRAVRGKRGVCLYDLGLFLANWFYANFIAANLEXLNYATLSTFNSETYRAPAASDNVRISIFVVPLQNVLVPLQNIFVPLQNGVVDPRLWEAIVDPSLLHSLDPGFSIRLHIIVSNSAATAXDIVASACWRLCTSASIFYASRANALPXLLSDGSRCSSPFRSPRWRYSSMSTKETISNVNDVSLEITKQLLTTEGKXXNMVFSPLSIQVVLWLLTAGSKGPTREQLLAFLRSKSTDQLNSLASHLVPLIFTDGSTKGGPCLSFANGLWVKDXIPIIPSFKEVVDTAYKAAIKHVSFVNPEEVRREVNLWAEKATKGLITEALSPGXIDHTTTLILSNALYFKGLXSRKFDASRTITDNFHLLNGTSVXAPFMRSSGEHFVRAFDGFKVLKLPYSQGEDKERQFSMYLLLPDEKYGLPALVERVCSEPGFLDRHXPRRRXPVGEFKIPRFKITSGFTASEILMDLGLVLPFNGXGDLTEMLESGXXXAKMIHKSFIEVDEDGTKAAAASVYYTLMCSAGPVERIEEIDFVADHPFLLLIREETTGTVMFIGHVLNPLEE