Gene Details:

  • Gene ID: Lus10032749
  • Gene Family: B3 Family
  • Description: B3 Family protein
  • Species: Linum usitatissimum
  • Source: B3 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • TrEMBL:  A0A0D2QJW5  — A0A0D2QJW5_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A0D2S570  — A0A0D2S570_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A0D2TND1  — A0A0D2TND1_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A0D2TND7  — A0A0D2TND7_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A0D2TT17  — A0A0D2TT17_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A0D2TT21  — A0A0D2TT21_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A0D2UR56  — A0A0D2UR56_GOSRA; Uncharacterized protein
  • TrEMBL:  A0A1U8HKR4  — A0A1U8HKR4_GOSHI; B3 domain-containing protein REM16-like isoform X1
  • TrEMBL:  A0A1U8HRR1  — A0A1U8HRR1_GOSHI; B3 domain-containing protein REM16-like isoform X2
  • TrEMBL:  A0A2P5Q955  — A0A2P5Q955_GOSBA; Uncharacterized protein
  • TrEMBL:  A0A2P5XFT9  — A0A2P5XFT9_GOSBA; Uncharacterized protein
  • STRING:  Lus10032749  — (Linum usitatissimum)

Gene Ontology:

  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
  • All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
  • The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.

Literature:

Sequences:

CDS Sequence:
  • >Lus10032749|Linum_usitatissimum|B3|Lus10032749
    ATGAGACACAAATTGCCGGAAACCGTCACGGTAAGGGGTCCCAGCAAAATTGAGTGGAGAGCTGGATCGACGGCCGAAAATGACAGCGGCGTGTTCTTCTCTCTCAGCTGGAGGGAATTCGCAGCGAACAACTCATTGCAACCCAATGATCTGTTAGTCTTCAAGTACAGTGATGATTCCGGTTTCGATGTTGGGATTGTCGATCCCGCCATCTCCTGCGAGACGTTGCACTGGATTTCGCCAGGAAAATTGAGGCACCTAAACGGGGTCGTCAGACTCAGCCAGCTGCAGAGGAGGAAGAAGTGA
Protein Sequence:
  • >Lus10032749|Linum_usitatissimum|B3|Lus10032749
    MRHKLPETVTVRGPSKIEWRAGSTAENDSGVFFSLSWREFAANNSLQPNDLLVFKYSDDSGFDVGIVDPAISCETLHWISPGKLRHLNGVVRLSQLQRRKK*